We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ABCC8
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA STOMACH

GENE/PROTEIN

Antibody validation


Dictionary

Stomach, lower
Stomach, upper

Tissue proteome

Stomach

STOMACH - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:2.7TPM
GTEx:4.0RPKM

STOMACH 1 - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Glandular cells:Low
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA042318

 

Antibody CAB011451

 

Glandular cells

Low   High  
   
   
   

STOMACH 2 - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Glandular cells:Low
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA042318

 

Antibody CAB011451

 

Glandular cells

Medium   High  
   
   
   

STOMACH - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

2.7

overview Female, age 33 Sample 1
TPM: 1.7
Cell types%
Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35
N/A Male, age 82 Sample 2
TPM: 2.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30
overview Male, age 71 Sample 3
TPM: 5.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45
overview Female, age 66 Sample 4
TPM: 0.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

4.0

GTEx sample id

Sample description

RPKM

Stomach
RPKM: 4.0
Samples: 193

Max RPKM: 14.1
Min RPKM: 0.0
Std RPKM: 3.3
Median RPKM: 3.7
GTEX-W5WG-1726-SM-4LMI5 50-59 years, female 14.1
GTEX-ZYFG-1326-SM-5GICJ 60-69 years, female 13.2
GTEX-13QBU-1126-SM-5LU44 40-49 years, female 13.1
GTEX-14BMV-2226-SM-5RQHX 50-59 years, male 13.1
GTEX-WRHK-0626-SM-4MVOE 20-29 years, female 13.1
GTEX-QV31-0626-SM-447C5 30-39 years, male 12.4
GTEX-Q2AI-0826-SM-48TZO 40-49 years, male 11.8
GTEX-PWCY-0926-SM-48TD7 20-29 years, female 11.0
GTEX-T6MO-0726-SM-4DM58 40-49 years, female 10.5
GTEX-XUZC-0726-SM-4BOPH 30-39 years, female 9.8
GTEX-139D8-2326-SM-5IFGE 30-39 years, female 9.7
GTEX-OXRK-1626-SM-3NB17 50-59 years, female 9.6
GTEX-ZZ64-0426-SM-5E43F 20-29 years, male 9.6
GTEX-11EM3-1026-SM-5A5KL 20-29 years, female 9.4
GTEX-13113-0726-SM-5LZUF 60-69 years, female 9.4
GTEX-Y9LG-1026-SM-5IFJN 30-39 years, male 9.4
GTEX-ZA64-0826-SM-5HL9U 20-29 years, male 9.3
GTEX-V955-1326-SM-4JBHR 60-69 years, male 9.2
GTEX-144GN-1226-SM-5O991 50-59 years, male 9.0
GTEX-111CU-0926-SM-5EGIK 50-59 years, male 8.6
GTEX-ZP4G-1226-SM-4WWCJ 20-29 years, female 8.4
GTEX-ZZPU-1426-SM-5GZZ6 50-59 years, female 8.1
GTEX-12WSK-1426-SM-5CVNN 40-49 years, female 7.9
GTEX-13CF3-1926-SM-5K7WF 60-69 years, female 7.8
GTEX-OHPK-1526-SM-3MJGM 50-59 years, female 7.8
GTEX-ZT9W-1526-SM-4YCDE 50-59 years, male 7.8
GTEX-1122O-1926-SM-5EGIQ 60-69 years, female 7.7
GTEX-TMMY-1626-SM-4DXTY 40-49 years, female 7.6
GTEX-XQ8I-2026-SM-4BOOL 50-59 years, male 7.6
GTEX-XV7Q-1326-SM-4BRWM 40-49 years, female 7.6
GTEX-UJMC-1226-SM-4IHLI 50-59 years, male 7.5
GTEX-12WSG-2026-SM-5FQUU 50-59 years, female 7.4
GTEX-13FTX-0726-SM-5N9BI 20-29 years, female 7.4
GTEX-V1D1-1726-SM-4JBHB 50-59 years, male 7.3
GTEX-WEY5-1226-SM-4LMIQ 40-49 years, female 7.1
GTEX-P4PP-1526-SM-3P61M 30-39 years, female 7.0
GTEX-WFON-1126-SM-4LVMA 40-49 years, male 6.9
GTEX-ZAB4-1526-SM-5CVN7 40-49 years, male 6.8
GTEX-13O21-0926-SM-5IFGT 50-59 years, male 6.6
GTEX-145MO-2226-SM-5Q5BN 60-69 years, male 6.6
GTEX-PWOO-1226-SM-48TCO 40-49 years, female 6.6
GTEX-11TT1-0726-SM-5GU5A 20-29 years, male 6.5
GTEX-PWN1-1526-SM-48TDA 40-49 years, female 6.5
GTEX-ZVZP-1726-SM-5GZWY 50-59 years, male 6.4
GTEX-WFG7-1326-SM-4LMK1 20-29 years, male 6.3
GTEX-145LT-1426-SM-5O9B3 40-49 years, male 6.2
GTEX-14BMU-1126-SM-5RQJ8 20-29 years, female 6.1
GTEX-Y3I4-1626-SM-4TT7W 50-59 years, male 6.1
GTEX-Y5LM-1326-SM-5RQIS 40-49 years, female 6.1
GTEX-ZV7C-1626-SM-5NQ7E 50-59 years, male 6.1
GTEX-Y8LW-0826-SM-4WWDO 50-59 years, female 6.0
GTEX-YFCO-0826-SM-5LUAG 40-49 years, male 6.0
GTEX-ZLFU-1326-SM-4WWET 40-49 years, male 6.0
GTEX-QLQ7-0826-SM-447B3 60-69 years, male 5.8
GTEX-S4UY-1626-SM-4AD55 40-49 years, female 5.8
GTEX-SNOS-0826-SM-4DM5N 40-49 years, male 5.8
GTEX-133LE-1326-SM-5IFGO 20-29 years, female 5.7
GTEX-13FH7-1026-SM-5IJGF 50-59 years, female 5.6
GTEX-RM2N-0826-SM-48FD3 50-59 years, male 5.6
GTEX-T5JW-0926-SM-4DM5K 20-29 years, female 5.6
GTEX-132QS-1826-SM-5IFFN 60-69 years, male 5.5
GTEX-ZDYS-1926-SM-5HL59 50-59 years, male 5.3
GTEX-ZYY3-1726-SM-5EGH3 60-69 years, female 5.3
GTEX-13D11-2126-SM-5IFH2 50-59 years, female 5.1
GTEX-13FTW-1726-SM-5KM2B 40-49 years, male 5.0
GTEX-145MN-1326-SM-5NQ9S 30-39 years, male 5.0
GTEX-S4Q7-0726-SM-4AD5F 20-29 years, male 5.0
GTEX-XUJ4-1226-SM-4BOPD 60-69 years, female 5.0
GTEX-X15G-1126-SM-4PQZG 50-59 years, female 4.9
GTEX-111YS-1126-SM-5GZYQ 60-69 years, male 4.8
GTEX-O5YW-1526-SM-3MJGL 50-59 years, male 4.8
GTEX-U3ZN-2026-SM-4DXUC 30-39 years, female 4.8
GTEX-13U4I-2526-SM-5SI8Z 40-49 years, female 4.7
GTEX-NFK9-1526-SM-3LK7B 40-49 years, male 4.7
GTEX-SUCS-0926-SM-4DM4Z 70-79 years, male 4.7
GTEX-12696-1726-SM-5EQLH 60-69 years, male 4.5
GTEX-131XF-1226-SM-5HL8V 60-69 years, male 4.5
GTEX-S341-0626-SM-4AD5T 40-49 years, female 4.5
GTEX-ZQUD-0826-SM-57WDQ 30-39 years, male 4.5
GTEX-11I78-1726-SM-5A5M3 50-59 years, female 4.4
GTEX-ZVT2-1626-SM-51MRC 50-59 years, female 4.4
GTEX-12BJ1-1726-SM-5HL9B 60-69 years, male 4.3
GTEX-1399S-1626-SM-5P9GI 30-39 years, female 4.3
GTEX-WHWD-1426-SM-4OORU 50-59 years, male 4.2
GTEX-QLQW-0726-SM-447AA 30-39 years, male 4.1
GTEX-R53T-1226-SM-48FCT 50-59 years, female 4.1
GTEX-RWS6-0926-SM-47JXE 60-69 years, female 4.1
GTEX-ZLV1-0826-SM-4WWEQ 60-69 years, female 4.1
GTEX-ZVT3-2126-SM-59HL2 60-69 years, female 4.1
GTEX-139YR-1926-SM-5LZXM 50-59 years, male 3.9
GTEX-SNMC-0626-SM-4DM6H 20-29 years, male 3.9
GTEX-QV44-1226-SM-4R1KE 50-59 years, male 3.8
GTEX-S3XE-1026-SM-4AD4O 50-59 years, male 3.8
GTEX-XBED-1226-SM-4AT5V 60-69 years, male 3.8
GTEX-131XG-1226-SM-5EGH9 50-59 years, female 3.7
GTEX-PW2O-1226-SM-48TCH 20-29 years, male 3.7
GTEX-S95S-0826-SM-4B64N 60-69 years, male 3.7
GTEX-13RTK-0226-SM-5RQHR 20-29 years, male 3.6
GTEX-11GSP-2126-SM-5HL5E 60-69 years, female 3.5
GTEX-Q2AH-1126-SM-48TZM 40-49 years, male 3.5
GTEX-RTLS-2626-SM-46MUJ 60-69 years, female 3.4
GTEX-XBEW-1826-SM-4RTWX 40-49 years, male 3.4
GTEX-QCQG-0526-SM-48U2A 50-59 years, female 3.3
GTEX-QDVJ-1426-SM-48U1Y 50-59 years, male 3.3
GTEX-ZXES-1426-SM-5NQ8S 30-39 years, female 3.3
GTEX-Y5V6-1326-SM-4VDTF 60-69 years, male 3.2
GTEX-144GM-1726-SM-5O9AS 20-29 years, male 3.1
GTEX-117YX-1026-SM-5H11V 50-59 years, male 2.9
GTEX-11DXX-1326-SM-5GIDZ 60-69 years, female 2.9
GTEX-YEC4-1426-SM-5IFHS 40-49 years, male 2.9
GTEX-U4B1-1026-SM-4DXT1 40-49 years, male 2.7
GTEX-VJYA-1026-SM-4KL21 60-69 years, male 2.7
GTEX-ZVP2-1626-SM-5GU5D 50-59 years, male 2.7
GTEX-ZY6K-0726-SM-5A5L8 50-59 years, male 2.7
GTEX-11NSD-1426-SM-5HL67 20-29 years, male 2.6
GTEX-P78B-1826-SM-3P5YX 40-49 years, female 2.6
GTEX-ZPU1-1626-SM-4WWB2 40-49 years, male 2.6
GTEX-132AR-2426-SM-5IFFD 50-59 years, female 2.5
GTEX-Q734-1026-SM-48U16 40-49 years, female 2.5
GTEX-QMRM-1126-SM-447BN 50-59 years, male 2.4
GTEX-12WSD-2326-SM-59HKQ 60-69 years, female 2.2
GTEX-S4Z8-1226-SM-4AD6W 60-69 years, male 2.2
GTEX-T8EM-1226-SM-4DM5J 40-49 years, male 2.2
GTEX-13OW6-2526-SM-5IJEC 50-59 years, male 2.1
GTEX-PX3G-1526-SM-48U11 20-29 years, female 2.1
GTEX-ZF2S-1426-SM-57WET 50-59 years, female 2.1
GTEX-XXEK-0826-SM-4BRWG 50-59 years, male 2.0
GTEX-QDVN-1226-SM-48TZ5 50-59 years, male 1.9
GTEX-WFG8-1326-SM-4LVN3 20-29 years, male 1.7
GTEX-QXCU-1926-SM-48FE4 50-59 years, male 1.6
GTEX-117YW-2226-SM-5N9DB 50-59 years, male 1.5
GTEX-Y8E4-1526-SM-4WWDI 40-49 years, male 1.5
GTEX-13S7M-1826-SM-5RQK6 60-69 years, female 1.4
GTEX-UPK5-2126-SM-4JBJK 40-49 years, male 1.4
GTEX-YJ8A-1526-SM-5P9FT 20-29 years, male 1.4
GTEX-13PVQ-2126-SM-5L3FW 50-59 years, male 1.3
GTEX-POMQ-0826-SM-3P61H 20-29 years, female 1.3
GTEX-12C56-0526-SM-5FQST 20-29 years, male 1.2
GTEX-1399R-1126-SM-5IFIO 30-39 years, male 1.2
GTEX-WZTO-2126-SM-4PQYW 40-49 years, male 1.2
GTEX-1211K-1426-SM-5FQTF 60-69 years, female 1.1
GTEX-ZYVF-2726-SM-5GID4 50-59 years, female 1.1
GTEX-11P82-0726-SM-5PNYL 20-29 years, male 1.0
GTEX-145ME-1026-SM-5O9B4 40-49 years, female 1.0
GTEX-U8T8-1226-SM-4E3IH 60-69 years, male 1.0
GTEX-WHPG-0426-SM-4M1XW 50-59 years, male 1.0
GTEX-Y3IK-1426-SM-4YCES 50-59 years, female 1.0
GTEX-11EQ9-1226-SM-5987E 30-39 years, male 0.9
GTEX-ZE7O-3026-SM-51MS4 50-59 years, female 0.9
GTEX-11WQK-2626-SM-5EQ4K 50-59 years, male 0.8
GTEX-13111-1226-SM-5GCNC 50-59 years, male 0.8
GTEX-11EI6-2426-SM-5PNVS 60-69 years, male 0.7
GTEX-11NUK-2426-SM-5BC4U 50-59 years, male 0.7
GTEX-13N1W-2026-SM-5K7YU 70-79 years, male 0.7
GTEX-13O61-1126-SM-5L3FI 60-69 years, male 0.7
GTEX-OOBJ-1526-SM-3NB1Q 60-69 years, male 0.7
GTEX-P4PQ-1526-SM-3NMCK 60-69 years, male 0.7
GTEX-S7SF-0626-SM-4AD4V 20-29 years, female 0.7
GTEX-XAJ8-0326-SM-47JYI 40-49 years, male 0.7
GTEX-1399U-1626-SM-5P9J3 50-59 years, female 0.6
GTEX-13O3Q-2126-SM-5KM4C 50-59 years, male 0.6
GTEX-13QJ3-2726-SM-5SI6L 50-59 years, male 0.6
GTEX-RU1J-0526-SM-46MUT 20-29 years, female 0.6
GTEX-T5JC-1926-SM-4DM6Q 20-29 years, male 0.6
GTEX-TKQ2-0926-SM-4DXU5 50-59 years, male 0.6
GTEX-SIU7-1426-SM-4BRWT 50-59 years, male 0.5
GTEX-XPVG-1526-SM-4B66C 50-59 years, male 0.5
GTEX-11P7K-1726-SM-5GU6F 30-39 years, male 0.4
GTEX-PLZ6-0826-SM-3P61K 30-39 years, male 0.4
GTEX-R55C-1026-SM-48FCM 40-49 years, male 0.4
GTEX-R55G-1126-SM-48FDG 40-49 years, female 0.4
GTEX-S4P3-0726-SM-4AD57 50-59 years, female 0.4
GTEX-ZV6S-0926-SM-57WGB 40-49 years, female 0.4
GTEX-11VI4-0326-SM-5EQ6L 40-49 years, female 0.3
GTEX-13X6H-1626-SM-5Q5CT 50-59 years, female 0.3
GTEX-146FH-2126-SM-5SI9U 50-59 years, female 0.3
GTEX-146FR-2026-SM-5NQAI 60-69 years, female 0.3
GTEX-TKQ1-0526-SM-4DXTG 30-39 years, male 0.3
GTEX-UJHI-1026-SM-4IHJP 50-59 years, female 0.3
GTEX-Y114-1226-SM-4TT88 50-59 years, female 0.3
GTEX-131XE-2226-SM-5PNYX 50-59 years, male 0.2
GTEX-P4QT-1526-SM-3NMCT 50-59 years, female 0.2
GTEX-UPIC-1826-SM-4IHKC 20-29 years, female 0.2
GTEX-WFJO-1126-SM-4LVLZ 30-39 years, male 0.2
GTEX-YEC3-1426-101806-SM-5PNXX 50-59 years, male 0.2
GTEX-ZPIC-2026-SM-57WG3 40-49 years, female 0.2
GTEX-12WSJ-0926-SM-5P9JD 40-49 years, female 0.1
GTEX-1339X-1426-SM-5K7YO 40-49 years, male 0.1
GTEX-13OVI-2426-SM-5KM4J 60-69 years, female 0.1
GTEX-OIZH-1526-SM-3NB1J 50-59 years, male 0.1
GTEX-R55D-1526-SM-48FEJ 50-59 years, male 0.0
GTEX-WH7G-1526-SM-4LVMX 40-49 years, male 0.0
GTEX-ZTX8-0426-SM-59HLG 20-29 years, male 0.0
Show all

STOMACH - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

No Fantom CAGE analysis found for this gene / tissue

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.