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Gene name

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Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA COLON

GENE/PROTEIN

Antibody validation


Dictionary

Colon

Tissue proteome

Colon

COLON - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:7.7TPM
GTEx:6.0RPKM
FANTOM5:15.3Tags Per Million

COLON - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Endothelial cells:High
Glandular cells:Not detected
Peripheral nerve/ganglion:Low
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA035840

 

Antibody HPA035841

 

Endothelial cells

Medium   High  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

Medium   Low  
   
   
   

COLON - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

7.7

overview Male, age 54 Sample 1
TPM: 8.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 7.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

6.0

GTEx sample id

Sample description

RPKM

Colon - Sigmoid
RPKM: 5.9
Samples: 149

Max RPKM: 14.3
Min RPKM: 3.5
Std RPKM: 1.5
Median RPKM: 5.8
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 14.3
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 11.5
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 9.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 9.8
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 9.8
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 9.3
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 9.1
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 8.9
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 8.7
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 8.1
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 8.0
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 7.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 7.9
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 7.9
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 7.9
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 7.8
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 7.4
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 7.4
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 7.4
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 7.3
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 7.3
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 7.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 7.2
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 7.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 6.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 6.8
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 6.8
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 6.8
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 6.8
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 6.8
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 6.7
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 6.7
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 6.7
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 6.7
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 6.7
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 6.7
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 6.7
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 6.6
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 6.6
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 6.6
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 6.6
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 6.6
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 6.5
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 6.5
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 6.5
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 6.4
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 6.4
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 6.4
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 6.4
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 6.3
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 6.3
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 6.3
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 6.3
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 6.2
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 6.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 6.2
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 6.2
GTEX-1122O-1426-SM-5H11R 60-69 years, female 6.1
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 6.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 6.1
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 6.1
GTEX-XBED-1726-SM-47JYO 60-69 years, male 6.1
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 6.0
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 6.0
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 6.0
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 5.9
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 5.9
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 5.9
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 5.9
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 5.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 5.8
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 5.8
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 5.8
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 5.8
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 5.8
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 5.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 5.7
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 5.7
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 5.7
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 5.7
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 5.7
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 5.6
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 5.6
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 5.6
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 5.6
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 5.6
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 5.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 5.6
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 5.6
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 5.5
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 5.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 5.4
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 5.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 5.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 5.3
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 5.3
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 5.3
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 5.3
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 5.2
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 5.2
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 5.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 5.2
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 5.2
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 5.1
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 5.1
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 4.9
GTEX-13111-1926-SM-5GCOL 50-59 years, male 4.9
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 4.9
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 4.9
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 4.9
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 4.9
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 4.9
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 4.9
GTEX-12696-1926-SM-5EGJT 60-69 years, male 4.8
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 4.8
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 4.8
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 4.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 4.7
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 4.7
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 4.7
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 4.6
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 4.6
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 4.6
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 4.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 4.5
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 4.4
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 4.4
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 4.4
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 4.3
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 4.3
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 4.3
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 4.3
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 4.2
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 4.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 4.2
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 4.2
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 4.2
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 4.2
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 4.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 4.1
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 4.1
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 4.0
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 3.9
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 3.9
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 3.9
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 3.8
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 3.7
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 3.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 3.5
Show all
Colon - Transverse
RPKM: 6.0
Samples: 196

Max RPKM: 12.6
Min RPKM: 1.6
Std RPKM: 1.2
Median RPKM: 5.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 12.6
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 9.5
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 8.5
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 8.3
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 8.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 8.1
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 8.1
GTEX-QLQW-0426-SM-447A7 30-39 years, male 8.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 8.0
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 7.9
GTEX-R55D-1826-SM-48FEF 50-59 years, male 7.9
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 7.9
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 7.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 7.6
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 7.6
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 7.6
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 7.6
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 7.5
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 7.5
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 7.5
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 7.4
GTEX-Q734-1126-SM-48TZY 40-49 years, female 7.4
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 7.4
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 7.4
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 7.4
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 7.3
GTEX-11DXX-1826-SM-5H126 60-69 years, female 7.3
GTEX-144GN-1126-SM-5LU33 50-59 years, male 7.3
GTEX-SE5C-1526-SM-4BRWU 40-49 years, female 7.3
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 7.3
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 7.2
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 7.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 7.2
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 7.2
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 7.1
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 7.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 7.1
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 7.0
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 7.0
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 7.0
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 7.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 6.9
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 6.9
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 6.9
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 6.8
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 6.8
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 6.8
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 6.8
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 6.8
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 6.8
GTEX-OIZH-1426-SM-3NB1O 50-59 years, male 6.7
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 6.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 6.7
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 6.7
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 6.7
GTEX-S7SF-1926-SM-4AT5B 20-29 years, female 6.7
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 6.7
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 6.6
GTEX-QMRM-1226-SM-447C6 50-59 years, male 6.6
GTEX-R55G-1226-SM-48FDC 40-49 years, female 6.6
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 6.6
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 6.6
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 6.5
GTEX-PLZ6-0926-SM-3P5ZQ 30-39 years, male 6.5
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 6.5
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 6.5
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 6.4
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 6.4
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 6.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 6.3
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 6.2
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 6.2
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 6.2
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 6.2
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 6.2
GTEX-139YR-2126-SM-5KM11 50-59 years, male 6.1
GTEX-144GM-1226-SM-5LU52 20-29 years, male 6.1
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 6.1
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 6.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 6.1
GTEX-ZPU1-1926-SM-57WDT 40-49 years, male 6.1
GTEX-ZTSS-1126-SM-5985O 40-49 years, male 6.1
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 6.1
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 6.1
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 6.0
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 6.0
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 6.0
GTEX-QCQG-1626-SM-48U26 50-59 years, female 6.0
GTEX-S3XE-1126-SM-4AD4N 50-59 years, male 6.0
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 6.0
GTEX-ZPCL-1826-SM-57WF1 60-69 years, female 6.0
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 6.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 5.9
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 5.9
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 5.9
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 5.9
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 5.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 5.8
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 5.8
GTEX-139T6-1326-SM-5IFFO 50-59 years, male 5.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 5.8
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 5.8
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 5.8
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 5.8
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 5.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 5.8
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 5.7
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 5.7
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 5.7
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 5.7
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 5.7
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 5.7
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 5.7
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 5.7
GTEX-1128S-1626-SM-5H12O 60-69 years, female 5.6
GTEX-13111-0726-SM-5DUVE 50-59 years, male 5.6
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 5.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 5.6
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 5.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 5.6
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 5.6
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 5.5
GTEX-117YX-0826-SM-5H11J 50-59 years, male 5.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 5.5
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 5.5
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 5.5
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 5.5
GTEX-XUW1-1926-SM-4BOP1 50-59 years, female 5.5
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 5.5
GTEX-Y8E4-2426-SM-4WWDN 40-49 years, male 5.5
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 5.4
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 5.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 5.4
GTEX-R55C-1126-SM-48FCJ 40-49 years, male 5.4
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 5.4
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 5.3
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 5.3
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 5.3
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 5.2
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 5.2
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 5.2
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 5.2
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 5.2
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 5.2
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 5.2
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 5.2
GTEX-ZZ64-0726-SM-5GZX4 20-29 years, male 5.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 5.1
GTEX-11NSD-1626-SM-5986U 20-29 years, male 5.1
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 5.1
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 5.1
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 5.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.1
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 5.0
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 5.0
GTEX-Y114-1526-SM-4TT79 50-59 years, female 5.0
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 5.0
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 4.9
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 4.9
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 4.9
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 4.9
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 4.9
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 4.9
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 4.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 4.8
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 4.8
GTEX-S341-1426-SM-4AD6U 40-49 years, female 4.8
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 4.7
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 4.7
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 4.7
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 4.7
GTEX-ZGAY-2126-SM-4YCFB 40-49 years, female 4.7
GTEX-ZP4G-1726-SM-4WWCM 20-29 years, female 4.7
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 4.6
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 4.6
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 4.6
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 4.5
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 4.5
GTEX-YEC3-2426-SM-5IFJR 50-59 years, male 4.5
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 4.4
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 4.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 4.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 4.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 4.3
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 4.2
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 4.2
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 4.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 4.0
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 4.0
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 3.9
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 3.9
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 3.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 3.8
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 3.7
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 2.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 1.6
Show all

COLON - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

15.3

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 15.3
FF:10014-101C5 62,83,84 years, mixed 15.3

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