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TISSUE ATLAS PROSTATE

GENE/PROTEIN

Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:4.5TPM
GTEx:5.7RPKM
FANTOM5:5.7Tags Per Million

PROSTATE - Annotated protein expression

Pending normal tissue analysis


PROSTATE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

4.5

overview Male, age 62 Sample 1
TPM: 20.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65 Sample 2
TPM: 4.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65 Sample 3
TPM: 1.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68 Sample 4
TPM: 5.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60 Sample 5
TPM: 3
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66 Sample 6
TPM: 1.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63 Sample 7
TPM: 2.6
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66 Sample 8
TPM: 1.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58 Sample 9
TPM: 5.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

5.7

GTEx sample id

Sample description

RPKM

Prostate
RPKM: 5.7
Samples: 106

Max RPKM: 33.0
Min RPKM: 0.9
Std RPKM: 4.6
Median RPKM: 4.5
GTEX-ZY6K-1526-SM-5GZXE 50-59 years, male 33.0
GTEX-144GM-0826-SM-5O98R 20-29 years, male 26.9
GTEX-S33H-1826-SM-4AD65 30-39 years, male 20.0
GTEX-X5EB-1826-SM-4E3K8 40-49 years, male 17.7
GTEX-139T6-1526-SM-5P9G6 50-59 years, male 13.8
GTEX-11WQK-2726-SM-5EQMU 50-59 years, male 13.2
GTEX-YJ8A-1126-SM-5IFJU 20-29 years, male 12.7
GTEX-111CU-1526-SM-5N9FS 50-59 years, male 11.2
GTEX-WFG8-1826-SM-4LVM4 20-29 years, male 11.1
GTEX-WOFM-0326-SM-4OOSL 20-29 years, male 10.7
GTEX-13FHO-2826-SM-5K7ZA 60-69 years, male 10.1
GTEX-Y8E4-2126-SM-5RQHO 40-49 years, male 9.7
GTEX-XPVG-2026-SM-4B65E 50-59 years, male 9.5
GTEX-11TUW-2126-SM-5GU7B 60-69 years, male 9.2
GTEX-QEG4-2226-SM-4R1JM 30-39 years, male 8.4
GTEX-ZTX8-1026-SM-5EGHD 20-29 years, male 8.3
GTEX-13O61-1726-SM-5KM46 60-69 years, male 7.7
GTEX-12C56-1326-SM-5FQSV 20-29 years, male 7.6
GTEX-WFON-1626-SM-4LVMV 40-49 years, male 7.6
GTEX-11O72-2726-SM-5HL6K 40-49 years, male 7.3
GTEX-14E6E-1126-SM-5S2R4 30-39 years, male 7.2
GTEX-S95S-1026-SM-4B64M 60-69 years, male 6.9
GTEX-111YS-1726-SM-5GIED 60-69 years, male 6.8
GTEX-11ZUS-2126-SM-5N9E6 30-39 years, male 6.7
GTEX-XMK1-1026-SM-4B65H 40-49 years, male 6.6
GTEX-13FTW-1226-SM-5LZZ1 40-49 years, male 6.5
GTEX-QV44-1526-SM-4R1KI 50-59 years, male 6.4
GTEX-145LT-0626-SM-5O99E 40-49 years, male 6.3
GTEX-12BJ1-1226-SM-5LUAE 60-69 years, male 6.2
GTEX-RM2N-1126-SM-48FCY 50-59 years, male 6.2
GTEX-ZTTD-2726-SM-57WFA 50-59 years, male 6.0
GTEX-ZZ64-0926-SM-5E44L 20-29 years, male 6.0
GTEX-OIZH-2026-SM-3NB1M 50-59 years, male 5.9
GTEX-QMRM-1426-SM-4R1K8 50-59 years, male 5.9
GTEX-148VJ-1826-SM-5Q5DV 70-79 years, male 5.7
GTEX-Q2AI-1126-SM-48U19 40-49 years, male 5.6
GTEX-11P82-1126-SM-5BC5K 20-29 years, male 5.5
GTEX-V1D1-1926-SM-4JBGX 50-59 years, male 5.5
GTEX-YF7O-1926-SM-4W1YQ 50-59 years, male 5.5
GTEX-ZLFU-1726-SM-4WWBU 40-49 years, male 5.4
GTEX-U4B1-1426-SM-4DXTX 40-49 years, male 5.3
GTEX-YB5E-1826-SM-5IFI4 40-49 years, male 5.2
GTEX-S3XE-1326-SM-4AD4H 50-59 years, male 5.1
GTEX-QV31-1026-SM-4R1K3 30-39 years, male 5.0
GTEX-11NSD-0826-SM-5986S 20-29 years, male 4.9
GTEX-131XF-1926-SM-5DUW4 60-69 years, male 4.9
GTEX-WH7G-1726-SM-4LVKY 40-49 years, male 4.9
GTEX-Y9LG-1826-SM-4VBQC 30-39 years, male 4.9
GTEX-ZDYS-1226-SM-5IJF3 50-59 years, male 4.9
GTEX-QLQ7-1326-SM-4R1JY 60-69 years, male 4.8
GTEX-SJXC-2026-SM-4DM6N 60-69 years, male 4.7
GTEX-U3ZM-0926-SM-4DXSW 40-49 years, male 4.7
GTEX-117YX-1526-SM-5H12T 50-59 years, male 4.6
GTEX-REY6-2126-SM-48FD9 60-69 years, male 4.5
GTEX-13OW8-0426-SM-5J2NR 60-69 years, male 4.4
GTEX-RWSA-2026-SM-47JX8 40-49 years, male 4.4
GTEX-13N2G-1826-SM-5KM1I 60-69 years, male 4.3
GTEX-SNMC-0926-SM-4DM5U 20-29 years, male 4.3
GTEX-OOBK-2025-SM-3LK5S 40-49 years, male 4.2
GTEX-UTHO-2726-SM-4JBH9 60-69 years, male 4.2
GTEX-XQ3S-2526-SM-4BOOG 20-29 years, male 4.2
GTEX-11DYG-2526-SM-5N9BB 60-69 years, male 4.1
GTEX-13G51-2326-SM-5LZXV 60-69 years, male 4.1
GTEX-SNOS-1026-SM-4DM4Y 40-49 years, male 4.1
GTEX-11OF3-1726-SM-5GU5Q 60-69 years, male 4.0
GTEX-NFK9-2226-SM-3MJGP 40-49 years, male 4.0
GTEX-XOTO-2826-SM-4B65I 50-59 years, male 4.0
GTEX-14BMV-2326-SM-5RQJ4 50-59 years, male 3.9
GTEX-S4Q7-1026-SM-4AD75 20-29 years, male 3.9
GTEX-132QS-1126-SM-5P9GC 60-69 years, male 3.8
GTEX-11EQ9-1726-SM-5HL6U 30-39 years, male 3.7
GTEX-145LV-1226-SM-5S2QH 50-59 years, male 3.7
GTEX-ZPU1-2026-SM-57WFI 40-49 years, male 3.6
GTEX-11TT1-2026-SM-5EQM8 20-29 years, male 3.5
GTEX-12696-2226-SM-5EQ65 60-69 years, male 3.5
GTEX-1399T-1226-SM-5P9J5 60-69 years, male 3.5
GTEX-13NYS-1026-SM-5KLZT 60-69 years, male 3.5
GTEX-VJYA-1226-SM-3GIJ6 60-69 years, male 3.5
GTEX-WFG7-1826-SM-3GIL1 20-29 years, male 3.5
GTEX-14ABY-0726-SM-5Q5DF 50-59 years, male 3.3
GTEX-XAJ8-0626-SM-47JY4 40-49 years, male 3.3
GTEX-132NY-2826-SM-5P9G2 60-69 years, male 3.1
GTEX-PLZ6-1126-SM-3P5ZR 30-39 years, male 3.1
GTEX-111FC-2026-SM-5GZYO 60-69 years, male 2.9
GTEX-U8XE-2526-SM-4E3IT 30-39 years, male 2.9
GTEX-NPJ8-2426-SM-3MJHL 40-49 years, male 2.8
GTEX-117YW-1426-SM-5EGGO 50-59 years, male 2.7
GTEX-U412-2026-SM-4DXSI 60-69 years, male 2.7
GTEX-WZTO-0926-SM-4PQZ3 40-49 years, male 2.7
GTEX-ZT9W-1626-SM-4YCDQ 50-59 years, male 2.7
GTEX-ZVP2-0826-SM-59HJ6 50-59 years, male 2.7
GTEX-14C5O-2826-SM-5RQI6 60-69 years, male 2.4
GTEX-13FXS-2826-SM-5LZYC 50-59 years, male 2.3
GTEX-T8EM-1826-SM-4DM7F 40-49 years, male 2.3
GTEX-146FQ-1726-SM-5QGPX 30-39 years, male 2.2
GTEX-OOBJ-2026-SM-3NB1R 60-69 years, male 2.2
GTEX-12ZZZ-2026-SM-5LZWJ 60-69 years, male 1.9
GTEX-ZUA1-2826-SM-59HLE 40-49 years, male 1.9
GTEX-XGQ4-1826-SM-4AT6F 50-59 years, male 1.8
GTEX-V955-1826-SM-4JBIL 60-69 years, male 1.7
GTEX-13111-1326-SM-5GCNO 50-59 years, male 1.6
GTEX-WK11-2626-SM-4OOSK 50-59 years, male 1.6
GTEX-1399R-0526-SM-5IJEF 30-39 years, male 1.3
GTEX-11P7K-0626-SM-5985Z 30-39 years, male 1.1
GTEX-13O21-1126-SM-5N9EV 50-59 years, male 1.0
GTEX-13RTJ-2126-SM-5S2PZ 60-69 years, male 0.9
Show all

PROSTATE - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

5.7

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 5.7
FF:10022-101D4 73,79,93 years, male 5.7

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The Human Protein Atlas project is funded
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