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Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival, using best separation (to the left) and median separation (to the right). Patients were divided based on level of expression into one of the two groups "low" or "high". Below each Kaplan-Meier plot, corresponding expression cutoff, 5-year survival for patients with high expression, 5-year survival for patients with low expression and log-rank P value are displayed. For melanoma and glioma, 3-year survival is shown. The survival analysis is described in Assays & Annotation.
The tabs at the top of the survival analysis section can be used to switch between the different cancer subtypes.
Best separation
Median separation
Expression cutoffi
5-year survival for patients with higher expression than the expression cutoff.
36.7 FPKM
28.6 FPKM
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
15%
14%
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
2%
0%
Log-rank P valuei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.
Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
Stage:
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
30.7
Number of samples
153
Samples
Sample
Description
FPKM
TCGA-26-5133-01A
59 years, male, white
93.2
TCGA-16-1045-01B
49 years, female, white
65.2
TCGA-15-1444-01A
21 years, male, white
62.8
TCGA-26-1442-01A
43 years, male, white
57.7
TCGA-28-5215-01A
62 years, female, white
56.6
TCGA-06-0184-01A
63 years, male, white
56.2
TCGA-02-0047-01A
78 years, male, white
55.9
TCGA-28-1747-01C
44 years, male, white
51.5
TCGA-76-4931-01A
70 years, female, white
50.1
TCGA-19-1787-01B
49 years, male, white
49.1
TCGA-32-1980-01A
72 years, male, white
48.7
TCGA-06-0646-01A
61 years, male, white
48.2
TCGA-06-2561-01A
53 years, female, white
47.0
TCGA-28-5220-01A
67 years, male, white
46.7
TCGA-06-0132-01A
49 years, male, white
45.2
TCGA-32-2616-01A
48 years, female, white
44.6
TCGA-27-1834-01A
56 years, male, white
42.7
TCGA-06-5411-01A
51 years, male, white
42.5
TCGA-28-5216-01A
52 years, male, white
42.0
TCGA-28-5209-01A
66 years, female, white
41.9
TCGA-16-0846-01A
85 years, male, white
41.6
TCGA-06-5858-01A
45 years, female, white
41.2
TCGA-19-2619-01A
55 years, female, black or african american
41.2
TCGA-06-0157-01A
63 years, female, white
41.0
TCGA-06-2557-01A
76 years, male, black or african american
40.8
TCGA-28-2499-01A
59 years, male, white
40.8
TCGA-27-1837-01A
36 years, male, white
40.7
TCGA-19-2629-01A
60 years, male, white
40.4
TCGA-28-2513-01A
69 years, female, white
40.3
TCGA-06-0125-01A
63 years, female, white
40.3
TCGA-32-2638-01A
67 years, male, white
39.9
TCGA-12-5299-01A
56 years, female, white
39.8
TCGA-27-2521-01A
34 years, male, white
39.5
TCGA-12-1597-01B
62 years, female, white
39.2
TCGA-28-5204-01A
72 years, male, white
39.1
TCGA-19-1390-01A
63 years, female, white
39.0
TCGA-14-1825-01A
70 years, male, white
38.0
TCGA-26-5135-01A
72 years, female, white
37.6
TCGA-06-0187-01A
69 years, male, white
37.3
TCGA-06-0749-01A
50 years, male, black or african american
37.2
TCGA-76-4932-01A
50 years, female, white
37.2
TCGA-28-2514-01A
45 years, male, asian
36.9
TCGA-06-2564-01A
50 years, male, white
36.9
TCGA-12-0618-01A
49 years, male, white
36.5
TCGA-41-5651-01A
59 years, female, black or african american
36.4
TCGA-14-0790-01B
64 years, female, white
36.3
TCGA-41-2572-01A
67 years, male, white
36.0
TCGA-06-0174-01A
54 years, male, white
35.3
TCGA-06-2563-01A
72 years, female, white
34.4
TCGA-12-0616-01A
36 years, female, white
34.4
TCGA-06-0644-01A
71 years, male, black or african american
33.6
TCGA-41-2571-01A
89 years, male, white
33.3
TCGA-06-0750-01A
43 years, male, white
33.2
TCGA-06-0211-01B
47 years, male, white
32.9
TCGA-28-1753-01A
53 years, male, white
32.8
TCGA-06-0686-01A
53 years, male, white
32.4
TCGA-27-2528-01A
62 years, male, white
32.4
TCGA-06-0190-01A
62 years, male, white
32.3
TCGA-06-0645-01A
56 years, female, white
32.1
TCGA-06-5414-01A
61 years, male, white
32.0
TCGA-06-2570-01A
21 years, female, white
31.7
TCGA-26-5139-01A
65 years, female, white
31.6
TCGA-32-4213-01A
47 years, female, white
31.6
TCGA-27-2526-01A
79 years, female, white
31.2
TCGA-06-5856-01A
58 years, male, white
31.0
TCGA-06-5859-01A
63 years, male, white
30.8
TCGA-12-3653-01A
34 years, female, white
30.8
TCGA-06-5412-01A
78 years, female, white
30.2
TCGA-41-4097-01A
63 years, female, white
30.0
TCGA-02-2485-01A
53 years, male, black or african american
30.0
TCGA-28-5207-01A
71 years, male, white
29.6
TCGA-32-2632-01A
80 years, male, white
29.4
TCGA-06-0178-01A
39 years, male, white
29.1
TCGA-06-0168-01A
59 years, female, white
29.0
TCGA-12-3650-01A
46 years, male, white
28.9
TCGA-06-5410-01A
72 years, female, white
28.7
TCGA-06-0649-01B
73 years, female, black or african american
28.6
TCGA-19-2624-01A
51 years, male, white
28.6
TCGA-28-2509-01A
77 years, female, white
28.4
TCGA-06-5416-01A
23 years, female, white
28.4
TCGA-32-1982-01A
76 years, female, white
27.9
TCGA-14-0817-01A
69 years, female, white
27.9
TCGA-06-0138-01A
43 years, male, white
27.6
TCGA-27-1832-01A
59 years, female, white
27.5
TCGA-06-2569-01A
24 years, female, black or african american
27.5
TCGA-06-0743-01A
69 years, male, white
27.4
TCGA-06-0238-01A
46 years, male, white
27.3
TCGA-06-0210-01A
72 years, female, white
27.2
TCGA-06-2565-01A
59 years, male, asian
26.8
TCGA-14-1823-01A
58 years, female, white
26.7
TCGA-26-5134-01A
74 years, male, white
26.5
TCGA-76-4929-01A
76 years, female, white
26.2
TCGA-06-0745-01A
59 years, male, white
26.2
TCGA-32-2615-01A
62 years, male, white
26.2
TCGA-32-1970-01A
59 years, male, white
26.1
TCGA-06-2559-01A
83 years, male, white
26.1
TCGA-06-0129-01A
30 years, male, asian
26.1
TCGA-76-4928-01B
85 years, female, white
26.1
TCGA-14-0789-01A
54 years, male, white
26.0
TCGA-76-4927-01A
58 years, male, white
25.9
TCGA-06-0158-01A
73 years, male, white
25.5
TCGA-32-5222-01A
66 years, male, white
25.2
TCGA-06-0882-01A
30 years, male, white
25.1
TCGA-08-0386-01A
74 years, male, white
24.7
TCGA-12-0619-01A
60 years, male, white
24.4
TCGA-28-5218-01A
63 years, male, white
24.4
TCGA-27-2524-01A
56 years, male, white
24.3
TCGA-32-2634-01A
82 years, male, white
23.7
TCGA-14-0781-01B
49 years, male, black or african american
22.9
TCGA-41-3915-01A
48 years, male, white
22.9
TCGA-02-2483-01A
43 years, male, asian
22.4
TCGA-76-4926-01B
68 years, male, white
22.4
TCGA-06-5417-01A
45 years, female, white
22.1
TCGA-06-2558-01A
75 years, female, white
22.0
TCGA-12-3652-01A
60 years, male, white
21.7
TCGA-27-2519-01A
48 years, male, white
21.5
TCGA-19-2625-01A
76 years, female, white
21.3
TCGA-28-5213-01A
72 years, male, white
20.9
TCGA-27-1830-01A
57 years, male, white
20.8
TCGA-14-1829-01A
57 years, male, black or african american
20.7
TCGA-06-2567-01A
65 years, male, white
20.6
TCGA-19-2620-01A
70 years, male, white
20.6
TCGA-06-0130-01A
54 years, male, white
20.5
TCGA-19-5960-01A
56 years, male, white
20.5
TCGA-12-5295-01A
60 years, female, white
20.4
TCGA-14-1034-01A
60 years, female
20.4
TCGA-19-4065-01A
36 years, male, white
20.4
TCGA-02-0055-01A
62 years, female, white
20.3
TCGA-06-0747-01A
53 years, male, white
20.1
TCGA-06-1804-01A
81 years, female, white
19.7
TCGA-06-0219-01A
67 years, male, white
19.4
TCGA-12-0821-01A
62 years, male, white
19.3
TCGA-06-5408-01A
54 years, female, white
19.3
TCGA-06-0878-01A
74 years, male, white
18.8
TCGA-06-5413-01A
67 years, male, white
18.5
TCGA-26-5136-01B
78 years, female, white
18.5
TCGA-76-4925-01A
76 years, male, white
18.3
TCGA-27-1835-01A
53 years, female, white
17.9
TCGA-14-0871-01A
75 years, female, white
17.8
TCGA-28-5208-01A
52 years, male, white
17.7
TCGA-02-2486-01A
64 years, male, white
17.4
TCGA-06-0141-01A
62 years, male, white
17.0
TCGA-06-0156-01A
57 years, male, white
16.5
TCGA-26-5132-01A
74 years, male, white
16.3
TCGA-06-5418-01A
75 years, female, white
16.3
TCGA-06-2562-01A
81 years, male, white
15.9
TCGA-06-0139-01A
40 years, male, white
14.8
TCGA-27-2523-01A
63 years, male, white
14.4
TCGA-06-0744-01A
67 years, male, white
14.3
TCGA-15-0742-01A
65 years, male, white
13.1
TCGA-14-0787-01A
69 years, male, asian
13.0
TCGA-14-2554-01A
52 years, female, white
11.2
TCGA-27-1831-01A
66 years, male, white
10.3
Show all
GLIOMA - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
