We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ACVR1
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA COLON

GENE/PROTEIN

Antibody validation


Dictionary

Colon

Tissue proteome

Colon

COLON - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:12.8TPM
GTEx:7.2RPKM
FANTOM5:29.0Tags Per Million

COLON - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA007505

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 

COLON - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

12.8

overview Male, age 54 Sample 1
TPM: 13
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 25.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

7.2

GTEx sample id

Sample description

RPKM

Colon - Sigmoid
RPKM: 8.7
Samples: 149

Max RPKM: 15.6
Min RPKM: 4.1
Std RPKM: 1.8
Median RPKM: 8.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 15.6
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 12.4
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 12.3
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 12.1
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 11.9
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 11.9
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 11.8
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 11.7
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 11.7
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 11.4
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 11.4
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 11.4
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 11.2
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 11.1
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 10.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 10.9
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 10.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 10.8
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 10.7
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 10.6
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 10.6
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 10.5
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 10.5
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 10.4
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 10.3
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 10.3
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 10.3
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 10.2
GTEX-12696-1926-SM-5EGJT 60-69 years, male 10.1
GTEX-13111-1926-SM-5GCOL 50-59 years, male 10.1
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 10.1
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 10.1
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 10.1
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 10.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 10.0
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 10.0
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 10.0
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 9.9
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 9.9
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 9.9
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 9.8
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 9.8
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 9.8
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 9.7
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 9.6
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 9.6
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 9.6
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 9.6
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 9.5
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 9.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 9.5
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 9.5
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 9.5
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 9.4
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 9.4
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 9.4
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 9.4
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 9.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 9.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 9.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 9.1
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 9.1
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 9.1
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 9.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 9.0
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 9.0
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 9.0
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 9.0
GTEX-1122O-1426-SM-5H11R 60-69 years, female 8.9
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 8.9
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 8.9
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 8.9
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 8.8
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 8.8
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 8.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 8.7
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 8.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 8.7
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 8.6
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 8.6
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 8.6
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 8.5
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 8.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 8.4
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 8.4
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 8.4
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 8.4
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 8.2
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 8.2
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 8.2
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 8.2
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 8.1
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 8.1
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 8.1
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 8.0
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 7.9
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 7.9
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 7.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 7.8
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 7.7
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 7.6
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 7.6
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 7.6
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 7.6
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 7.5
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 7.5
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 7.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 7.5
GTEX-XBED-1726-SM-47JYO 60-69 years, male 7.5
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 7.5
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 7.5
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 7.4
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 7.4
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 7.4
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 7.3
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 7.3
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 7.3
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 7.3
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 7.2
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 7.1
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 7.1
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 7.1
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 7.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 7.0
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 7.0
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 6.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 6.9
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 6.8
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 6.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 6.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 6.7
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 6.7
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 6.7
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 6.6
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 6.5
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 6.3
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 6.3
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 6.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 6.3
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 6.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 6.1
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 5.9
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 5.6
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 5.4
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 5.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 5.0
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 4.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 4.6
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 4.1
Show all
Colon - Transverse
RPKM: 6.1
Samples: 196

Max RPKM: 14.2
Min RPKM: 2.1
Std RPKM: 2.7
Median RPKM: 5.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 14.2
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 13.8
GTEX-117YX-0826-SM-5H11J 50-59 years, male 13.1
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 12.7
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 12.0
GTEX-S341-1426-SM-4AD6U 40-49 years, female 12.0
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 11.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 11.3
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 11.1
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 10.9
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 10.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 10.8
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 10.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 10.5
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 10.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 10.3
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 10.3
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 10.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 10.0
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 9.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 9.9
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 9.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 9.7
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 9.7
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 9.7
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 9.6
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 9.6
GTEX-S3XE-1126-SM-4AD4N 50-59 years, male 9.6
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 9.4
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 9.3
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 9.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 9.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 9.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 9.0
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 8.9
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 8.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 8.8
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 8.8
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 8.7
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 8.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 8.6
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 8.5
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 8.5
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 8.4
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 8.2
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 8.2
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 8.2
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 8.2
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 8.1
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 8.0
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 7.9
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 7.9
GTEX-ZGAY-2126-SM-4YCFB 40-49 years, female 7.8
GTEX-ZZ64-0726-SM-5GZX4 20-29 years, male 7.8
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 7.7
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 7.6
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 7.5
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 7.5
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 7.5
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 7.4
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 7.4
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 7.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 7.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 7.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 7.1
GTEX-144GN-1126-SM-5LU33 50-59 years, male 7.1
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 7.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 7.1
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 6.9
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 6.9
GTEX-Y8E4-2426-SM-4WWDN 40-49 years, male 6.9
GTEX-11GSP-1626-SM-5986N 60-69 years, female 6.6
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 6.6
GTEX-11NSD-1626-SM-5986U 20-29 years, male 6.5
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 6.5
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 6.5
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 6.5
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 6.4
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 6.4
GTEX-YEC3-2426-SM-5IFJR 50-59 years, male 6.4
GTEX-ZPCL-1826-SM-57WF1 60-69 years, female 6.4
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 6.4
GTEX-ZP4G-1726-SM-4WWCM 20-29 years, female 6.3
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 6.1
GTEX-OIZH-1426-SM-3NB1O 50-59 years, male 6.1
GTEX-XUW1-1926-SM-4BOP1 50-59 years, female 6.1
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 6.0
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 6.0
GTEX-Y114-1526-SM-4TT79 50-59 years, female 6.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.9
GTEX-SE5C-1526-SM-4BRWU 40-49 years, female 5.9
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 5.8
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 5.8
GTEX-QMRM-1226-SM-447C6 50-59 years, male 5.8
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 5.6
GTEX-1128S-1626-SM-5H12O 60-69 years, female 5.5
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 5.5
GTEX-139YR-2126-SM-5KM11 50-59 years, male 5.4
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 5.4
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 5.4
GTEX-ZTSS-1126-SM-5985O 40-49 years, male 5.4
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 5.3
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 5.3
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 5.3
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 5.2
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 5.2
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 5.2
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 5.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 4.9
GTEX-ZPU1-1926-SM-57WDT 40-49 years, male 4.8
GTEX-Q734-1126-SM-48TZY 40-49 years, female 4.7
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 4.5
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 4.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 4.5
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 4.5
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 4.5
GTEX-QLQW-0426-SM-447A7 30-39 years, male 4.4
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 4.4
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 4.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 4.3
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 4.3
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 4.3
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 4.2
GTEX-R55C-1126-SM-48FCJ 40-49 years, male 4.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 4.1
GTEX-PLZ6-0926-SM-3P5ZQ 30-39 years, male 4.1
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 4.1
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 4.1
GTEX-S7SF-1926-SM-4AT5B 20-29 years, female 4.1
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 4.1
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 4.0
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 4.0
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 4.0
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 4.0
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 4.0
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 4.0
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 4.0
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 3.9
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 3.9
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 3.9
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 3.9
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 3.9
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 3.8
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 3.8
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 3.8
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 3.8
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 3.8
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 3.8
GTEX-R55G-1226-SM-48FDC 40-49 years, female 3.8
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 3.8
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 3.8
GTEX-11DXX-1826-SM-5H126 60-69 years, female 3.7
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 3.7
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 3.7
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 3.7
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 3.7
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 3.6
GTEX-QCQG-1626-SM-48U26 50-59 years, female 3.6
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 3.6
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 3.6
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 3.6
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 3.5
GTEX-R55D-1826-SM-48FEF 50-59 years, male 3.5
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 3.5
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 3.5
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 3.5
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 3.4
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 3.4
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 3.4
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 3.3
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 3.3
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 3.3
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 3.2
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 3.2
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 3.2
GTEX-139T6-1326-SM-5IFFO 50-59 years, male 3.2
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 3.2
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 3.2
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 3.2
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 3.1
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 3.1
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 3.0
GTEX-13111-0726-SM-5DUVE 50-59 years, male 3.0
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 3.0
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 3.0
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 2.9
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 2.7
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 2.7
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 2.6
GTEX-144GM-1226-SM-5LU52 20-29 years, male 2.6
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 2.6
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 2.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 2.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 2.4
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 2.4
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 2.1
Show all

COLON - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

29.0

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 29.0
FF:10014-101C5 62,83,84 years, mixed 29.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.