We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ABCD3
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA COLON

GENE/PROTEIN

Antibody validation


Dictionary

Colon

Tissue proteome

Colon

COLON - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:45.7TPM
GTEx:8.9RPKM
FANTOM5:33.0Tags Per Million

COLON - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA032026

 

Antibody HPA032027

 

Antibody CAB032516

 

Antibody CAB075749

 

Endothelial cells

Low   Medium   Medium   Not detected  

Glandular cells

High   High   High   High  

Peripheral nerve/ganglion

Medium   Medium   Medium   Not detected  
       
       
       

COLON - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

45.7

overview Male, age 54 Sample 1
TPM: 42.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 39.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 51.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 75.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 26.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 32.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 51.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 51.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 33.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 57.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 48.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 49.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 35.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

8.9

GTEx sample id

Sample description

RPKM

Colon - Sigmoid
RPKM: 6.3
Samples: 149

Max RPKM: 9.7
Min RPKM: 3.2
Std RPKM: 1.3
Median RPKM: 6.2
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 9.7
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 9.7
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 9.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 9.5
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 9.1
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 9.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 8.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 8.9
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 8.8
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 8.6
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 8.6
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 8.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.4
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 8.4
GTEX-XBED-1726-SM-47JYO 60-69 years, male 8.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 8.3
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 8.1
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 8.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 8.0
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 8.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 8.0
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 8.0
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 7.8
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 7.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 7.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 7.5
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 7.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 7.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 7.4
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 7.4
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 7.3
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 7.3
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 7.3
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 7.2
GTEX-12696-1926-SM-5EGJT 60-69 years, male 7.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 7.2
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 7.2
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 7.2
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 7.1
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 7.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 7.1
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 7.1
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 7.0
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 7.0
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 7.0
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 7.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 7.0
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 6.9
GTEX-1122O-1426-SM-5H11R 60-69 years, female 6.8
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 6.8
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 6.7
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 6.7
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 6.7
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 6.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 6.7
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 6.7
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 6.7
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 6.7
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 6.6
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 6.6
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 6.6
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 6.5
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 6.5
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 6.4
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 6.4
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 6.4
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 6.4
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 6.4
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 6.4
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 6.3
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 6.3
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 6.3
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 6.3
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 6.3
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 6.2
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 6.2
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 6.2
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 6.1
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 6.1
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 6.1
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 6.0
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 6.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 6.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 6.0
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 6.0
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 6.0
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 5.9
GTEX-13111-1926-SM-5GCOL 50-59 years, male 5.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 5.9
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 5.9
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 5.9
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 5.8
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 5.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 5.8
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 5.8
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 5.8
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 5.8
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 5.7
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 5.7
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 5.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 5.7
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 5.7
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 5.6
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 5.6
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 5.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 5.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 5.6
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 5.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 5.5
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 5.5
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 5.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 5.5
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 5.5
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 5.4
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 5.4
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 5.3
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 5.3
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 5.3
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 5.3
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 5.3
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 5.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 5.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 5.2
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 5.2
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 5.2
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 5.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 5.0
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 4.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 4.9
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 4.8
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 4.8
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 4.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 4.7
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 4.7
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 4.7
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 4.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 4.6
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 4.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 4.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 4.3
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 4.2
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 4.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 4.0
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 3.9
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 3.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 3.7
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 3.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 3.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 3.2
Show all
Colon - Transverse
RPKM: 10.9
Samples: 196

Max RPKM: 25.5
Min RPKM: 3.0
Std RPKM: 4.2
Median RPKM: 10.5
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 25.5
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 24.0
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 20.8
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 20.4
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 20.2
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 19.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 19.3
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 19.3
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 18.9
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 18.9
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 18.3
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 18.2
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 18.1
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 18.1
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 17.9
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 17.7
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 17.6
GTEX-13111-0726-SM-5DUVE 50-59 years, male 17.0
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 17.0
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 16.5
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 16.4
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 16.3
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 16.3
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 16.2
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 16.2
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 16.1
GTEX-R55G-1226-SM-48FDC 40-49 years, female 15.8
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 15.6
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 15.5
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 15.4
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 15.3
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 15.3
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 15.3
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 15.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 15.0
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 14.8
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 14.8
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 14.7
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 14.7
GTEX-R55D-1826-SM-48FEF 50-59 years, male 14.5
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 14.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 14.4
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 14.3
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 14.3
GTEX-QLQW-0426-SM-447A7 30-39 years, male 14.2
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 14.0
GTEX-ZTSS-1126-SM-5985O 40-49 years, male 14.0
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 13.9
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 13.9
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 13.7
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 13.7
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 13.5
GTEX-139YR-2126-SM-5KM11 50-59 years, male 13.5
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 13.3
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 13.1
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 13.1
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 13.1
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 13.0
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 13.0
GTEX-ZP4G-1726-SM-4WWCM 20-29 years, female 13.0
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 12.9
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 12.9
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 12.8
GTEX-144GN-1126-SM-5LU33 50-59 years, male 12.6
GTEX-ZGAY-2126-SM-4YCFB 40-49 years, female 12.6
GTEX-ZPCL-1826-SM-57WF1 60-69 years, female 12.6
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 12.5
GTEX-OIZH-1426-SM-3NB1O 50-59 years, male 12.4
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 12.4
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 12.3
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 12.3
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 12.3
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 12.3
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 12.2
GTEX-S7SF-1926-SM-4AT5B 20-29 years, female 11.9
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 11.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 11.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 11.8
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 11.8
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 11.8
GTEX-144GM-1226-SM-5LU52 20-29 years, male 11.6
GTEX-139T6-1326-SM-5IFFO 50-59 years, male 11.5
GTEX-11DXX-1826-SM-5H126 60-69 years, female 11.4
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 11.4
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 11.4
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 11.4
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 11.3
GTEX-QCQG-1626-SM-48U26 50-59 years, female 11.2
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 11.2
GTEX-ZPU1-1926-SM-57WDT 40-49 years, male 11.2
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 11.1
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 11.0
GTEX-Y8E4-2426-SM-4WWDN 40-49 years, male 11.0
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 10.9
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 10.9
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 10.8
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 10.6
GTEX-SE5C-1526-SM-4BRWU 40-49 years, female 10.6
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 10.5
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 10.4
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 10.4
GTEX-PLZ6-0926-SM-3P5ZQ 30-39 years, male 10.4
GTEX-Q734-1126-SM-48TZY 40-49 years, female 10.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 10.3
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 10.2
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 10.1
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 10.0
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 10.0
GTEX-1128S-1626-SM-5H12O 60-69 years, female 9.9
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 9.9
GTEX-S3XE-1126-SM-4AD4N 50-59 years, male 9.9
GTEX-QMRM-1226-SM-447C6 50-59 years, male 9.7
GTEX-R55C-1126-SM-48FCJ 40-49 years, male 9.7
GTEX-XUW1-1926-SM-4BOP1 50-59 years, female 9.6
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 9.5
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 9.5
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 9.2
GTEX-ZZ64-0726-SM-5GZX4 20-29 years, male 9.0
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 8.7
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 8.7
GTEX-YEC3-2426-SM-5IFJR 50-59 years, male 8.7
GTEX-S341-1426-SM-4AD6U 40-49 years, female 8.6
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 8.6
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 8.6
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 8.6
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 8.5
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 8.4
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 8.3
GTEX-11NSD-1626-SM-5986U 20-29 years, male 8.2
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 8.2
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 8.2
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 8.1
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 8.1
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 8.1
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 8.0
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 7.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 7.8
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 7.8
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 7.7
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 7.7
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 7.6
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 7.6
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 7.4
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 7.3
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 7.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 7.2
GTEX-Y114-1526-SM-4TT79 50-59 years, female 7.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 7.1
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 7.0
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 6.9
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 6.9
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 6.9
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 6.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 6.8
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 6.8
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 6.7
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 6.7
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 6.7
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 6.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 6.5
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 6.5
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 6.4
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 6.4
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 6.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 6.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 6.2
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 6.2
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 6.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 6.1
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 6.1
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 6.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 6.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 6.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 6.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 5.9
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 5.9
GTEX-117YX-0826-SM-5H11J 50-59 years, male 5.8
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 5.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 5.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 5.8
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 5.7
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 5.7
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 5.6
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 5.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 5.3
GTEX-11GSP-1626-SM-5986N 60-69 years, female 5.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 5.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 5.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 5.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 5.1
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 5.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 4.9
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 4.6
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 4.3
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 4.3
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 3.0
Show all

COLON - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

33.0

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 33.0
FF:10014-101C5 62,83,84 years, mixed 33.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.