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PATHOLOGY ATLAS COLORECTAL CANCER

GENE/PROTEIN

Antibody validation

Dictionary

Colorectal cancer

COLORECTAL CANCER - Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival, using best separation (to the left) and median separation (to the right). Patients were divided based on level of expression into one of the two groups "low" or "high". Below each Kaplan-Meier plot, corresponding expression cutoff, 5-year survival for patients with high expression, 5-year survival for patients with low expression and log-rank P value are displayed. For melanoma and glioma, 3-year survival is shown. The survival analysis is described in Assays & Annotation.

The tabs at the top of the survival analysis section can be used to switch between the different cancer subtypes.

Colorectal cancer
Colon Adenocarcinoma (COAD)
Rectum Adenocarcinoma (READ)

Best separation

Median separation

Expression cutoffi

5-year survival for patients with higher expression than the expression cutoff.

22.5 FPKM 13.0 FPKM

5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

62% 58%

5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

61% 61%

Log-rank P valuei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

3.92e-1 8.36e-1

Interactive survival scatter plot (individual patient data)i

The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.

Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.




Stage:



TCGA RNA samplesi

RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM

25.8

Number of samples

597

Samples

Sample

Description

FPKM

TCGA-AA-A01P-01A 80 years, female, stage:iii 446.2
TCGA-D5-6534-01A 62 years, female, white, stage:iia 319.9
TCGA-A6-6651-01A 55 years, female, white, stage:iiib 257.8
TCGA-F4-6703-01A 64 years, male, white, stage:iia 242.7
TCGA-AF-2690-01A 77 years, female, white, stage:iiic 239.5
TCGA-AD-6964-01A 58 years, male, white 222.6
TCGA-G4-6302-01A 90 years, female, white, stage:iia 204.6
TCGA-AY-6196-01A 47 years, male, white, stage:iiic 197.5
TCGA-F4-6807-01A 51 years, female, white, stage:iiic 191.4
TCGA-AD-6901-01A 78 years, male, white 184.2
TCGA-AA-3489-01A 75 years, male, stage:ii 166.1
TCGA-EI-7004-01A 37 years, female, white 164.8
TCGA-CM-5348-01A 72 years, male, white, stage:iiib 157.7
TCGA-F4-6569-01A 60 years, male, white, stage:i 150.3
TCGA-F5-6465-01A 64 years, female, white, stage:iia 148.7
TCGA-CM-6162-01A 48 years, female, white, stage:iiib 136.1
TCGA-DC-6158-01A 70 years, male, white, stage:i 129.6
TCGA-AZ-4323-01A 37 years, male, white, stage:iv 127.0
TCGA-CA-6717-01A 57 years, male, asian, stage:iia 122.9
TCGA-AZ-6605-01A 78 years, male, white, stage:iiib 120.2
TCGA-D5-6928-01A 80 years, male, white, stage:iia 113.6
TCGA-DM-A1HB-01A 75 years, male, white, stage:iiib 108.0
TCGA-5M-AAT6-01A 40 years, female, black or african american, stage:iv 100.7
TCGA-CM-6169-01A 67 years, male, black or african american, stage:iia 98.9
TCGA-D5-6529-01A 69 years, male, white, stage:iia 97.0
TCGA-AG-3901-01A 67 years, female, stage:iiib 93.6
TCGA-F4-6704-01A 60 years, male, american indian or alaska native, stage:iiic 92.9
TCGA-CM-6163-01A 74 years, male, white, stage:i 90.2
TCGA-AA-A00D-01A 70 years, male, stage:i 88.8
TCGA-A6-5664-01A 80 years, male, black or african american, stage:iiic 87.3
TCGA-DC-6156-01A 62 years, male, white, stage:iva 86.2
TCGA-F5-6571-01A 62 years, female, white, stage:iia 86.1
TCGA-A6-6782-01A 82 years, male, white, stage:iib 84.6
TCGA-A6-6654-01A 65 years, female, white, stage:iiib 84.2
TCGA-CM-6167-01A 57 years, female, black or african american, stage:iiic 84.2
TCGA-F5-6864-01A 74 years, female, white, stage:iiib 82.2
TCGA-AA-3986-01A 73 years, male, stage:i 82.2
TCGA-F4-6809-01A 52 years, female, white, stage:iva 81.9
TCGA-G4-6625-01A 77 years, female, white, stage:iia 81.0
TCGA-AF-2687-01A 57 years, male, white, stage:iiic 81.0
TCGA-F5-6812-01A 67 years, male, white, stage:iia 75.7
TCGA-CI-6624-01C 53 years, female, white, stage:i 70.4
TCGA-AG-3731-01A 65 years, male, stage:iv 66.7
TCGA-G4-6299-01A 69 years, male, white, stage:iiic 66.6
TCGA-AA-A01R-01A 47 years, male, stage:iii 66.5
TCGA-CM-6168-01A 84 years, female, black or african american, stage:iia 66.2
TCGA-G5-6572-01A 56 years, male, white 65.9
TCGA-A6-6141-01A 31 years, male, black or african american, stage:iia 65.3
TCGA-G4-6303-01A 54 years, female, white, stage:iv 65.1
TCGA-CM-5341-01A 82 years, female, white, stage:iiia 61.9
TCGA-CK-4951-01A 79 years, female, white, stage:iia 61.8
TCGA-A6-2681-01A 73 years, female, white, stage:iia 61.8
TCGA-WS-AB45-01A female, black or african american, stage:iia 60.6
TCGA-A6-3808-01A 73 years, male, white, stage:iia 60.3
TCGA-AA-3966-01A 89 years, female, stage:iia 59.6
TCGA-AH-6547-01A 79 years, female, white 59.4
TCGA-A6-6781-01B 43 years, male, white, stage:iiic 59.1
TCGA-CM-6165-01A 74 years, male, white, stage:iia 59.1
TCGA-D5-6926-01A 65 years, male, white, stage:iiib 58.8
TCGA-A6-2675-01A 78 years, male, white, stage:iia 57.4
TCGA-AG-3882-01A 66 years, female, stage:i 57.2
TCGA-A6-2685-01A 48 years, female, black or african american, stage:iia 57.0
TCGA-A6-4107-01A 57 years, female, white, stage:iiib 55.2
TCGA-AD-6899-01A 84 years, male, white, stage:iiic 53.8
TCGA-D5-6930-01A 67 years, male, white, stage:iia 53.0
TCGA-G4-6627-01A 84 years, male, white, stage:iia 52.4
TCGA-A6-6649-01A 66 years, male, white, stage:iiib 51.9
TCGA-CM-6170-01A 73 years, female, white, stage:i 51.7
TCGA-F5-6813-01A 70 years, male, white, stage:iiic 51.1
TCGA-AA-3672-01A 90 years, female, stage:iii 50.6
TCGA-AA-3514-01A 81 years, female, stage:i 50.1
TCGA-AA-3866-01A 78 years, female, stage:i 49.3
TCGA-A6-2686-01A 81 years, female, white, stage:iia 49.3
TCGA-CM-4747-01A 47 years, male, white, stage:iva 48.6
TCGA-CK-4947-01B 46 years, female, white, stage:iiib 47.8
TCGA-CM-6677-01A 75 years, female, white, stage:iia 47.6
TCGA-A6-2679-01A 73 years, female, white, stage:iib 47.1
TCGA-AG-3890-01A 62 years, male, stage:i 47.1
TCGA-D5-5541-01A 63 years, male, white, stage:iiib 46.2
TCGA-F5-6464-01A 77 years, female, white, stage:iiic 46.0
TCGA-AG-3728-01A 73 years, male, stage:iiib 45.8
TCGA-AA-3715-01A 77 years, male, stage:ii 45.0
TCGA-AG-4022-01A 59 years, female, stage:ii 44.9
TCGA-NH-A50V-01A 69 years, male, black or african american, stage:iiib 44.9
TCGA-AH-6644-01A 73 years, male, white 44.6
TCGA-AG-3575-01A 51 years, male, stage:ii 44.6
TCGA-A6-6138-01A 61 years, male, white, stage:i 44.5
TCGA-AA-3552-01A 85 years, male, stage:iiic 44.2
TCGA-A6-2674-01A 72 years, male, white, stage:iv 44.2
TCGA-F4-6459-01A 61 years, female, white, stage:iiib 43.8
TCGA-AG-3732-01A 78 years, female, stage:i 43.4
TCGA-G4-6314-01A 76 years, female, white, stage:iv 43.3
TCGA-CM-6680-01A 78 years, female, white, stage:iiib 43.1
TCGA-AM-5821-01A 68 years, female, white, stage:iia 42.7
TCGA-CA-6719-01A 77 years, male, asian, stage:iia 42.2
TCGA-AA-3554-01A 62 years, female, stage:iia 42.2
TCGA-F4-6805-01A 58 years, female, white, stage:iia 42.1
TCGA-AA-3496-01A 83 years, female, stage:ii 41.8
TCGA-AD-5900-01A 67 years, male, white, stage:i 41.2
TCGA-D5-6922-01A 76 years, male, white, stage:iiia 41.0
TCGA-CM-5860-01A 44 years, male, white, stage:iia 40.8
TCGA-F5-6811-01A 72 years, female, white, stage:iia 40.2
TCGA-D5-6540-01A 66 years, male, white, stage:i 40.0
TCGA-A6-5657-01A 65 years, male, black or african american, stage:iiib 39.3
TCGA-DC-6681-01A 70 years, female, white, stage:iva 39.2
TCGA-AD-6895-01A 84 years, male, white, stage:iiib 38.9
TCGA-F4-6570-01A 78 years, female, white, stage:iia 38.4
TCGA-A6-5659-01A 82 years, male, white, stage:i 38.1
TCGA-BM-6198-01A 73 years, male, white, stage:iiib 38.1
TCGA-3L-AA1B-01A 61 years, female, black or african american, stage:i 37.7
TCGA-AA-3544-01A 68 years, male, stage:i 37.1
TCGA-A6-3810-01A 63 years, male, white, stage:iia 36.9
TCGA-AA-3982-01A 75 years, male, stage:iiib 36.5
TCGA-D5-6924-01A 68 years, male, white, stage:iia 36.3
TCGA-A6-2671-01A 85 years, male, white, stage:iv 36.3
TCGA-AG-A02G-01A 66 years, male, stage:iv 36.1
TCGA-CM-4752-01A 58 years, male, black or african american, stage:iia 35.7
TCGA-A6-5656-01B 74 years, male, white, stage:i 35.6
TCGA-A6-A5ZU-01A 59 years, male, black or african american, stage:iiib 35.5
TCGA-F4-6855-01A 70 years, female, white, stage:iia 35.4
TCGA-D5-6923-01A 57 years, male, white, stage:i 35.2
TCGA-G4-6628-01A 78 years, male, white, stage:i 35.1
TCGA-AU-3779-01A 80 years, female, white, stage:iia 35.0
TCGA-AG-3881-01A 83 years, female, stage:iia 34.7
TCGA-D5-5539-01A 60 years, male, white, stage:iiia 34.6
TCGA-AA-3856-01A 59 years, male, stage:iia 34.4
TCGA-AA-A01D-01A 47 years, female, stage:iiic 34.3
TCGA-AU-6004-01A 69 years, female, white, stage:i 34.2
TCGA-EI-6507-01A 60 years, male, white, stage:iia 34.2
TCGA-AZ-6607-01A 69 years, male, white, stage:iv 33.9
TCGA-A6-2682-01A 70 years, male, white, stage:iv 33.9
TCGA-G4-6295-01A 70 years, female, white, stage:ii 33.6
TCGA-G4-6297-01A 55 years, female, white, stage:iv 33.5
TCGA-AA-3553-01A 61 years, female, stage:i 33.0
TCGA-D5-6535-01A 80 years, female, white, stage:iiib 32.7
TCGA-F4-6461-01A 41 years, female, white, stage:iiic 32.7
TCGA-AA-A010-01A 46 years, female, stage:iib 32.5
TCGA-AA-3678-01A 60 years, female, stage:iii 32.5
TCGA-AA-3673-01A 53 years, female, stage:ii 32.3
TCGA-AG-4001-01A 74 years, female, stage:iia 32.2
TCGA-AD-6890-01A 65 years, male, white 32.2
TCGA-EI-6511-01A 52 years, male, white, stage:iiib 32.2
TCGA-CM-5861-01A 63 years, female, white, stage:iia 32.1
TCGA-CM-6679-01A 58 years, male, white, stage:iia 31.9
TCGA-D5-6898-01A 51 years, female, white, stage:i 31.7
TCGA-AA-3841-01A 66 years, male, stage:iia 31.6
TCGA-AA-3812-01A 82 years, female, stage:iia 31.6
TCGA-AA-3877-01A 83 years, female, stage:i 31.5
TCGA-CM-4748-01A 53 years, male, white, stage:iiib 31.2
TCGA-F4-6460-01A 51 years, female, white, stage:iiib 30.8
TCGA-AF-A56K-01A 56 years, male, black or african american, stage:iia 30.5
TCGA-AG-3878-01A 64 years, male, stage:i 30.4
TCGA-CM-6161-01A 36 years, female, white, stage:i 30.3
TCGA-NH-A6GA-01A 58 years, male, black or african american, stage:iiic 29.7
TCGA-G4-6311-01A 80 years, male, white, stage:iii 29.7
TCGA-A6-2677-01B 68 years, female, white, stage:iiic 29.6
TCGA-AZ-4684-01A 50 years, male, white, stage:iva 29.4
TCGA-CA-6718-01A 46 years, male, asian, stage:iia 29.2
TCGA-AG-A036-01A 71 years, male, stage:iii 29.0
TCGA-CM-5863-01A 60 years, female, white, stage:iiib 28.8
TCGA-AG-3612-01A 55 years, female, stage:iiib 28.8
TCGA-D5-5538-01A 60 years, female, white, stage:iiib 28.5
TCGA-A6-6142-01A 56 years, female, white, stage:iva 27.8
TCGA-EI-6884-01A 71 years, male, white, stage:iiia 27.4
TCGA-CM-6172-01A 70 years, female, white, stage:iiib 27.3
TCGA-AZ-6601-01A 68 years, male, white, stage:ii 26.7
TCGA-A6-2672-01B 82 years, female, white, stage:iiib 26.7
TCGA-CM-4751-01A 62 years, male, white, stage:iiib 26.4
TCGA-AA-3538-01A 54 years, female, stage:i 26.4
TCGA-AA-A00Q-01A 66 years, female, stage:iiib 26.0
TCGA-AY-4071-01A 63 years, female, white, stage:i 25.7
TCGA-AD-6548-01A 81 years, female, white, stage:i 25.6
TCGA-AA-3870-01A 71 years, female, stage:iv 25.3
TCGA-EI-7002-01A 58 years, male, white, stage:iv 25.2
TCGA-A6-4105-01A 79 years, male, white, stage:iia 25.1
TCGA-F4-6463-01A 51 years, male, white, stage:iia 25.0
TCGA-AG-3609-01A 65 years, female, stage:iiic 25.0
TCGA-AA-A01K-01A 74 years, female, stage:iiic 25.0
TCGA-CK-5916-01A 71 years, female, white, stage:i 25.0
TCGA-AG-4008-01A 63 years, male, stage:iia 25.0
TCGA-AF-6655-01A 66 years, male, white, stage:iiia 24.9
TCGA-EI-6917-01A 33 years, male, white, stage:iiia 24.9
TCGA-AZ-6603-01A 77 years, female, white 24.8
TCGA-D5-6927-01A 34 years, male, white, stage:iia 24.5
TCGA-F5-6702-01A 71 years, male, white, stage:iva 24.5
TCGA-AG-3902-01A 61 years, male, stage:iia 24.3
TCGA-EI-6883-01A 63 years, male, white, stage:iic 24.3
TCGA-A6-A565-01A 34 years, female, black or african american, stage:iiic 24.1
TCGA-AF-2691-01A 48 years, female, white, stage:i 23.9
TCGA-EI-6885-01A 57 years, female, white, stage:iv 23.5
TCGA-CI-6621-01A 63 years, male, white, stage:iiib 23.3
TCGA-DC-6683-01A 43 years, male, white, stage:iiib 23.3
TCGA-AA-A02R-01A 84 years, female, stage:iia 23.2
TCGA-AA-3543-01A 84 years, male, stage:i 23.1
TCGA-D5-6541-01A 49 years, male, white, stage:iia 23.1
TCGA-A6-5667-01A 40 years, female, white, stage:iiib 23.0
TCGA-CM-6166-01A 48 years, female, white, stage:i 22.9
TCGA-AY-4070-01A 51 years, female, black or african american, stage:iiic 22.8
TCGA-AA-3517-01A 60 years, male, stage:iia 22.8
TCGA-DC-5869-01A 62 years, female, black or african american, stage:iiib 22.7
TCGA-D5-6536-01A 73 years, male, white, stage:iia 22.6
TCGA-AA-3869-01A 76 years, male, stage:iv 22.5
TCGA-QG-A5Z1-01A 71 years, male, black or african american, stage:iiib 22.5
TCGA-CI-6619-01B 41 years, male, white, stage:iv 22.5
TCGA-AA-3851-01A 74 years, male, stage:iia 22.2
TCGA-AA-3532-01A 63 years, male, stage:iia 22.2
TCGA-AA-3971-01A 58 years, male, stage:iii 22.2
TCGA-AZ-4308-01A 47 years, female, white, stage:iiib 22.2
TCGA-CK-6747-01A 87 years, female, white, stage:iia 22.1
TCGA-AA-3867-01A 74 years, male, stage:iv 22.1
TCGA-AD-6963-01A 58 years, male, white 21.8
TCGA-CM-4750-01A 34 years, female, white, stage:iiia 21.6
TCGA-AA-3560-01A 72 years, female, stage:iiic 21.4
TCGA-A6-A566-01A 55 years, female, black or african american, stage:iiib 21.2
TCGA-AF-3400-01A 54 years, male, white, stage:iia 21.1
TCGA-F4-6854-01A 77 years, female, white, stage:iia 21.0
TCGA-AG-A00Y-01A 68 years, male, stage:iia 20.9
TCGA-D5-6931-01A 77 years, male, white, stage:iiic 20.8
TCGA-AG-A00H-01A 75 years, male, stage:iia 20.8
TCGA-AA-A02W-01A 73 years, female, stage:i 20.7
TCGA-AA-3989-01A 84 years, male, stage:iv 20.7
TCGA-CM-6676-01A 82 years, male, white, stage:i 20.7
TCGA-AA-A00F-01A 66 years, male, stage:iiic 20.6
TCGA-AZ-4615-01A 84 years, male, white, stage:iiib 20.5
TCGA-AD-6965-01A 62 years, male, white, stage:iiic 20.4
TCGA-AF-A56N-01A 47 years, female, black or african american, stage:iia 20.2
TCGA-F4-6806-01A 59 years, female, white, stage:i 20.1
TCGA-EI-6514-01A 59 years, female, white, stage:iia 20.1
TCGA-AA-3975-01A 80 years, male, stage:i 19.9
TCGA-AA-A00N-01A 75 years, male, stage:iib 19.8
TCGA-AA-3556-01A 78 years, male, stage:i 19.7
TCGA-DM-A0XF-01A 68 years, female, white, stage:iiic 19.6
TCGA-AG-3582-01A 75 years, male, stage:iv 19.5
TCGA-AA-3837-01A 67 years, male, stage:iia 19.3
TCGA-AA-A00O-01A 83 years, female, stage:iiic 19.3
TCGA-CK-5912-01A 82 years, male, white, stage:i 19.1
TCGA-AG-3883-01A 69 years, male, stage:i 19.1
TCGA-D5-6531-01A 75 years, male, white, stage:iia 19.1
TCGA-AA-3968-01A 55 years, female, stage:i 19.0
TCGA-AA-3949-01A 87 years, female, stage:iiib 18.7
TCGA-AG-3584-01A 60 years, male, stage:iv 18.6
TCGA-AA-A00J-01A 80 years, male, stage:iiib 18.2
TCGA-AA-3875-01A 78 years, female, stage:i 17.9
TCGA-DC-6154-01A 57 years, female, white, stage:iva 17.7
TCGA-DC-6157-01A 48 years, male, black or african american, stage:i 17.7
TCGA-AA-A017-01A 57 years, female, stage:iia 17.6
TCGA-AA-A01V-01A 59 years, male, stage:i 17.6
TCGA-AA-3511-01A 64 years, male, stage:ii 17.6
TCGA-AA-3862-01A 82 years, male, stage:iia 17.5
TCGA-AG-3587-01A 65 years, male, stage:i 17.4
TCGA-D5-6530-01A 53 years, male, white, stage:i 17.3
TCGA-AZ-5403-01A 43 years, male, white, stage:ii 17.3
TCGA-AF-6136-01A 72 years, female, white, stage:iiib 17.1
TCGA-AG-3580-01A 67 years, male, stage:i 16.9
TCGA-D5-6929-01A 49 years, female, white, stage:iv 16.8
TCGA-AF-4110-01A 77 years, male, white, stage:iva 16.5
TCGA-AA-3815-01A 65 years, female, stage:iia 16.2
TCGA-DY-A0XA-01A 57 years, female, white, stage:iia 16.2
TCGA-AA-3548-01A 71 years, female, stage:iiic 16.2
TCGA-AA-3506-01A 77 years, male, stage:i 15.9
TCGA-DT-5265-01A 51 years, male, asian, stage:ii 15.7
TCGA-AG-A023-01A 62 years, female, stage:iv 15.7
TCGA-AA-A004-01A 76 years, male, stage:iia 15.5
TCGA-AA-A01X-01A 80 years, female, stage:iii 15.5
TCGA-AA-3860-01A 53 years, female, stage:iiib 15.4
TCGA-D5-7000-01A 79 years, female, white, stage:i 15.3
TCGA-CA-5254-01A 42 years, female, asian, stage:iia 15.3
TCGA-A6-2684-01C 75 years, female, white, stage:i 15.3
TCGA-CK-4948-01B 45 years, female, white, stage:iii 15.3
TCGA-AA-A02O-01A 82 years, male, stage:ii 15.1
TCGA-CM-5349-01A 68 years, female, white, stage:iia 15.1
TCGA-CM-6678-01A 63 years, female, white, stage:iva 15.0
TCGA-NH-A5IV-01A 90 years, female, black or african american, stage:iia 14.9
TCGA-CI-6623-01B 44 years, male, white, stage:i 14.8
TCGA-AA-3510-01A 70 years, male, stage:ii 14.8
TCGA-AA-3956-01A 65 years, male, stage:iia 14.7
TCGA-AA-3520-01A 86 years, female, stage:ii 14.6
TCGA-F5-6861-01A 60 years, female, white, stage:iia 14.6
TCGA-G4-6323-01A 50 years, male, black or african american, stage:ia 14.5
TCGA-AA-3831-01A 66 years, male, stage:iia 14.1
TCGA-AZ-6600-01A 64 years, male, black or african american, stage:iv 14.1
TCGA-AA-A03F-01A 90 years, female, stage:iii 14.0
TCGA-CM-6674-01A 39 years, male, white, stage:iia 14.0
TCGA-AG-3898-01A 61 years, male, stage:iia 13.9
TCGA-A6-6137-01A 55 years, male, white, stage:iiib 13.9
TCGA-AA-A00R-01A 64 years, female, stage:i 13.9
TCGA-A6-2678-01A 43 years, female, white, stage:iiib 13.8
TCGA-AA-3680-01A 67 years, female, stage:iv 13.7
TCGA-CM-6164-01A 46 years, female, white, stage:iia 13.7
TCGA-NH-A6GB-01A 71 years, female, black or african american, stage:iiic 13.7
TCGA-AG-3893-01A 74 years, male, stage:iiib 13.6
TCGA-AA-3530-01A 80 years, male, stage:i 13.5
TCGA-AA-3818-01A 78 years, female, stage:iia 13.4
TCGA-AA-3846-01A 74 years, female, stage:iia 13.3
TCGA-AZ-6598-01A 77 years, female, white, stage:ii 13.3
TCGA-AA-3549-01A 69 years, male, stage:i 13.2
TCGA-AA-3495-01A 79 years, male, stage:i 13.2
TCGA-AA-3534-01A 78 years, female, stage:iia 13.1
TCGA-EF-5831-01A 72 years, male, white, stage:iia 13.0
TCGA-AA-3662-01A 80 years, female, stage:iv 12.9
TCGA-A6-2676-01A 75 years, female, white, stage:iib 12.9
TCGA-AG-4007-01A 87 years, male, stage:iv 12.9
TCGA-AA-3833-01A 63 years, female, stage:iia 12.8
TCGA-AA-A01C-01A 75 years, male, stage:iiia 12.8
TCGA-AG-A011-01A 80 years, male, stage:iia 12.8
TCGA-AD-6888-01A 73 years, male, white, stage:iiib 12.7
TCGA-AA-A00E-01A 65 years, male, stage:iia 12.5
TCGA-NH-A8F8-01A 79 years, male, black or african american, stage:iv 12.4
TCGA-G4-6294-01A 76 years, male, white, stage:iv 12.3
TCGA-QL-A97D-01A 84 years, female, black or african american, stage:i 12.2
TCGA-CK-6751-01A 88 years, female, white, stage:i 12.2
TCGA-5M-AATE-01A 76 years, male, black or african american, stage:iia 12.2
TCGA-DM-A28G-01A 75 years, male, white, stage:iia 12.1
TCGA-AA-3858-01A 67 years, male, stage:i 12.1
TCGA-AA-3710-01A 80 years, female, stage:iia 12.1
TCGA-AA-3950-01A 79 years, female, stage:iia 12.1
TCGA-AA-3821-01A 81 years, female, stage:i 11.9
TCGA-AA-3685-01A 69 years, male, stage:ii 11.9
TCGA-AA-A02E-01A 82 years, female, stage:iv 11.7
TCGA-AG-A025-01A 62 years, female, stage:i 11.7
TCGA-AA-3509-01A 54 years, female, stage:ii 11.7
TCGA-AA-3980-01A 89 years, female, stage:i 11.4
TCGA-D5-5537-01A 83 years, male, white 11.4
TCGA-AA-3562-01A 82 years, male, stage:iiic 11.4
TCGA-A6-3807-01A 53 years, female, white, stage:iiic 11.4
TCGA-A6-2680-01A 72 years, female, black or african american, stage:ii 11.4
TCGA-AA-3502-01A 73 years, male, stage:i 11.3
TCGA-A6-6653-01A 82 years, male, white, stage:i 11.2
TCGA-CM-5864-01A 60 years, male, white, stage:i 11.1
TCGA-G4-6293-01A 49 years, female, white, stage:iii 11.1
TCGA-AA-3675-01A 84 years, male, stage:ii 11.0
TCGA-AG-3608-01A 79 years, female, stage:iia 11.0
TCGA-AA-3666-01A 68 years, male, stage:iii 11.0
TCGA-A6-6780-01A 74 years, male, white, stage:iia 11.0
TCGA-G4-6321-01A 60 years, female, white, stage:iii 10.9
TCGA-AZ-4315-01A 61 years, male, white, stage:iia 10.8
TCGA-CI-6620-01A 41 years, female, white, stage:iva 10.7
TCGA-DY-A1DC-01A 72 years, female, white, stage:iia 10.6
TCGA-EI-6508-01A 48 years, female, white, stage:iiib 10.6
TCGA-AG-3578-01A 76 years, female, stage:iia 10.5
TCGA-AA-3655-01A 68 years, male, stage:ii 10.5
TCGA-AH-6643-01A 50 years, male, white, stage:iiic 10.4
TCGA-F4-6856-01A 45 years, male, white, stage:i 10.4
TCGA-CM-5344-01A 39 years, female, white, stage:iiib 10.3
TCGA-AA-3713-01A 68 years, male, stage:iv 10.3
TCGA-AA-A00Z-01A 70 years, male, stage:iia 10.3
TCGA-QG-A5YW-01A 55 years, female, black or african american, stage:iiic 10.3
TCGA-AA-3973-01A 69 years, male, stage:iv 10.2
TCGA-AA-3667-01A 36 years, female, stage:i 10.2
TCGA-AA-3518-01A 81 years, female, stage:iia 10.2
TCGA-AA-3664-01A 74 years, female, stage:ii 10.1
TCGA-D5-6932-01A 69 years, male, white, stage:iia 10.1
TCGA-AG-3727-01A 78 years, female, stage:iii 10.1
TCGA-G4-6310-01A 69 years, male, white, stage:iiib 10.0
TCGA-AA-A00A-01A 80 years, male, stage:iia 9.9
TCGA-AA-A01Q-01A 48 years, female, stage:ii 9.9
TCGA-AG-3574-01A 89 years, female, stage:ii 9.8
TCGA-AG-3592-01A 68 years, male, stage:iia 9.8
TCGA-DM-A1D8-01A 50 years, female, white 9.7
TCGA-AG-A032-01A 68 years, male, stage:iiib 9.6
TCGA-AF-3911-01A 48 years, male, white, stage:iiic 9.6
TCGA-AA-3526-01A 57 years, male, stage:i 9.6
TCGA-AA-3977-01A 65 years, male 9.5
TCGA-AG-3885-01A 71 years, female, stage:iiib 9.5
TCGA-AA-3861-01A 72 years, male, stage:iia 9.5
TCGA-AG-3581-01A 63 years, male, stage:i 9.4
TCGA-AG-A01N-01A 68 years, female, stage:iv 9.4
TCGA-AH-6549-01A 66 years, male, white 9.3
TCGA-AG-3594-01A 77 years, male, stage:iia 9.3
TCGA-AA-3848-01A 82 years, female, stage:iiic 9.3
TCGA-QG-A5Z2-01A 61 years, male, black or african american, stage:i 9.3
TCGA-AG-3909-01A 69 years, female, stage:iiib 9.2
TCGA-AG-3600-01A 62 years, male, stage:iiic 9.1
TCGA-AG-3593-01A 72 years, female, stage:iia 9.1
TCGA-CM-5868-01A 59 years, female, white, stage:iva 9.1
TCGA-CA-5256-01A 54 years, female, asian, stage:iia 9.0
TCGA-AF-2693-01A 75 years, male, white, stage:i 8.9
TCGA-AA-3994-01A 69 years, male, stage:iiib 8.8
TCGA-AA-3930-01A 66 years, male, stage:iv 8.7
TCGA-A6-3809-01A 71 years, female, white, stage:iib 8.7
TCGA-AZ-6606-01A 81 years, male, white, stage:iv 8.5
TCGA-AA-A01I-01A 76 years, male, stage:i 8.4
TCGA-AA-3522-01A 67 years, male, stage:iia 8.4
TCGA-G4-6588-01A 58 years, female, white, stage:iia 8.3
TCGA-DM-A28A-01A 78 years, male, white, stage:iiic 8.2
TCGA-A6-5661-01A 80 years, female, black or african american, stage:iia 8.2
TCGA-AG-3887-01A 68 years, male, stage:iia 8.1
TCGA-AA-3692-01A 47 years, female, stage:iv 8.1
TCGA-F5-6863-01A 71 years, female, white, stage:iiib 8.1
TCGA-G4-6586-01A 74 years, female, white, stage:iia 7.9
TCGA-CK-5913-01A 58 years, female, white, stage:iia 7.9
TCGA-AA-3555-01A 81 years, female, stage:iia 7.9
TCGA-AA-A03J-01A 65 years, female, stage:i 7.8
TCGA-A6-A56B-01A 57 years, male, black or african american, stage:iiib 7.7
TCGA-AY-6386-01A 66 years, female, black or african american, stage:iiib 7.7
TCGA-EF-5830-01A 54 years, male, white, stage:iib 7.7
TCGA-AF-A56L-01A 48 years, female, black or african american, stage:iiic 7.6
TCGA-AG-3611-01A 72 years, male, stage:iia 7.5
TCGA-AA-3970-01A 65 years, male, stage:iia 7.5
TCGA-DM-A0XD-01A 65 years, male, white, stage:iia 7.5
TCGA-CA-5797-01A 56 years, male, asian, stage:iia 7.5
TCGA-AA-3941-01A 84 years, female, stage:iva 7.4
TCGA-AG-A008-01A 50 years, female, stage:i 7.3
TCGA-AG-4021-01A 84 years, female, stage:iv 7.3
TCGA-AA-3947-01A 60 years, female, stage:iib 7.2
TCGA-AF-6672-01A 43 years, male, white, stage:iv 7.2
TCGA-CM-5862-01A 80 years, male, white, stage:iva 7.1
TCGA-AG-3742-01A 85 years, female, stage:i 7.1
TCGA-EI-6510-01A 77 years, female, white 7.1
TCGA-A6-2683-01A 57 years, female, white, stage:iv 7.1
TCGA-G4-6298-01A 90 years, male, black or african american, stage:iiib 7.1
TCGA-CK-6748-01A 45 years, female, white, stage:iv 7.0
TCGA-AZ-4616-01A 82 years, female, white, stage:iv 6.9
TCGA-AA-A02Y-01A 73 years, male, stage:i 6.9
TCGA-AG-3892-01A 57 years, female, stage:i 6.7
TCGA-AA-3494-01A 55 years, male, stage:iv 6.6
TCGA-DY-A1DE-01A 56 years, female, white, stage:iia 6.5
TCGA-DM-A280-01A 70 years, female, white, stage:iia 6.4
TCGA-AA-3688-01A 80 years, male, stage:iv 6.4
TCGA-AA-3681-01A 77 years, female, stage:iii 6.4
TCGA-AA-A02K-01A 50 years, male, stage:iv 6.4
TCGA-AG-3896-01A 85 years, female, stage:i 6.3
TCGA-AA-3939-01A 83 years, male, stage:iia 6.2
TCGA-AA-A00K-01A 79 years, male, stage:iia 6.2
TCGA-AA-3660-01A 51 years, female, stage:ii 6.2
TCGA-AG-A026-01A 66 years, male, stage:ii 6.2
TCGA-CA-5796-01A 53 years, female, asian, stage:iia 6.2
TCGA-AA-3516-01A 74 years, female, stage:iii 6.1
TCGA-CK-4950-01A 68 years, female, black or african american, stage:iiib 6.1
TCGA-AA-A02H-01A 74 years, female, stage:iv 6.1
TCGA-AG-3599-01A 70 years, male, stage:i 6.1
TCGA-EI-6881-01A 60 years, male, white, stage:iiia 6.0
TCGA-AA-A01Z-01A 68 years, male, stage:ii 6.0
TCGA-D5-6533-01A 68 years, female, white 6.0
TCGA-AG-A02X-01A 77 years, male, stage:i 6.0
TCGA-AG-4005-01A 64 years, male, stage:iv 5.9
TCGA-DM-A1D7-01A 82 years, male, white, stage:iia 5.9
TCGA-A6-5660-01A 73 years, male, black or african american, stage:iiic 5.8
TCGA-A6-6652-01A 59 years, male, black or african american, stage:iva 5.8
TCGA-AA-3697-01A 77 years, male, stage:ii 5.8
TCGA-DM-A1D9-01A 67 years, female, white, stage:iia 5.8
TCGA-AF-2692-01A 54 years, female, white, stage:iia 5.7
TCGA-DM-A0X9-01A 71 years, female, white, stage:iia 5.7
TCGA-AG-A02N-01A 67 years, male, stage:ii 5.7
TCGA-AA-3842-01A 51 years, male, stage:iiia 5.7
TCGA-AG-3999-01A 61 years, female, stage:iiic 5.7
TCGA-AG-A014-01A 86 years, male, stage:i 5.7
TCGA-AG-A01J-01A 59 years, female, stage:iia 5.6
TCGA-AA-3811-01A 84 years, female, stage:iii 5.6
TCGA-EI-6512-01A 64 years, female, white, stage:iiib 5.6
TCGA-DC-4749-01A 57 years, male, white, stage:i 5.5
TCGA-AA-3976-01A 70 years, male, stage:iiia 5.5
TCGA-AA-A00U-01A 50 years, male, stage:iiib 5.4
TCGA-AA-3864-01A 71 years, male, stage:ii 5.4
TCGA-4N-A93T-01A 67 years, male, black or african american, stage:iiib 5.3
TCGA-NH-A6GC-01A 66 years, female, black or african american, stage:ivb 5.2
TCGA-QG-A5YV-01A 64 years, female, black or african american, stage:iiic 5.2
TCGA-AA-3952-01A 68 years, male, stage:iiic 5.2
TCGA-DC-5337-01A 69 years, male, white, stage:i 5.2
TCGA-AA-3492-01A 90 years, female, stage:ii 5.2
TCGA-AG-A00C-01A 49 years, female, stage:iiib 5.1
TCGA-AA-3855-01A 72 years, male, stage:i 5.1
TCGA-DC-6155-01A 31 years, female, white, stage:iiia 5.1
TCGA-CM-6171-01A 77 years, female, white, stage:i 5.1
TCGA-EI-6513-01A 59 years, male, white, stage:iiib 5.1
TCGA-AG-3725-01A 90 years, female, stage:iii 5.1
TCGA-AG-3598-01A 69 years, male, stage:iia 4.9
TCGA-AA-3819-01A 41 years, female, stage:iia 4.9
TCGA-AA-A01F-01A 72 years, male, stage:iiib 4.9
TCGA-5M-AAT4-01A 74 years, male, black or african american, stage:iv 4.8
TCGA-G4-6322-01A 65 years, male, white, stage:iiib 4.8
TCGA-CK-5914-01A 81 years, male, white, stage:iiib 4.7
TCGA-CL-5917-01A 71 years, female, white, stage:iiic 4.7
TCGA-AG-3586-01A 72 years, female, stage:iii 4.7
TCGA-CM-4744-01A 69 years, male, white, stage:i 4.7
TCGA-NH-A50U-01A 42 years, male, black or african american, stage:iva 4.6
TCGA-AG-3894-01A 65 years, male, stage:iia 4.5
TCGA-AM-5820-01A 60 years, female, white, stage:iva 4.4
TCGA-AF-5654-01A 73 years, female, white, stage:i 4.3
TCGA-EI-6506-01A 78 years, female, white, stage:iia 4.3
TCGA-AZ-6599-01A 72 years, male, white, stage:i 4.3
TCGA-DC-4745-01A 49 years, female, white, stage:iiib 4.3
TCGA-AF-3913-01A 60 years, male, black or african american, stage:iv 4.3
TCGA-EI-6882-01A 59 years, male, white, stage:iia 4.2
TCGA-G5-6235-01A 72 years, male, white, stage:iiib 4.2
TCGA-A6-5665-01A 84 years, female, white, stage:iia 4.1
TCGA-AA-A024-01A 81 years, male, stage:ii 4.1
TCGA-A6-A567-01A 56 years, male, black or african american, stage:iv 4.1
TCGA-AY-5543-01A 65 years, female, black or african american, stage:iva 4.0
TCGA-AA-3844-01A 78 years, female, stage:iiic 4.0
TCGA-AA-3955-01A 38 years, male, stage:iiib 4.0
TCGA-DM-A28F-01A 73 years, male, white, stage:iiib 3.9
TCGA-AA-A00L-01A 66 years, male, stage:iia 3.9
TCGA-AA-3531-01A 75 years, female, stage:iia 3.8
TCGA-G4-6320-01A 73 years, male, white, stage:iii 3.8
TCGA-G4-6309-01A 40 years, female, black or african american, stage:iiib 3.8
TCGA-AG-3605-01A 85 years, female, stage:iv 3.7
TCGA-AY-A69D-01A 55 years, female, black or african american, stage:iia 3.7
TCGA-F5-6814-01A 57 years, male, white, stage:iia 3.7
TCGA-CL-5918-01A 90 years, female, white, stage:iia 3.7
TCGA-AY-6197-01A 60 years, male, white, stage:iia 3.6
TCGA-G4-6306-01A 71 years, male, white 3.6
TCGA-AA-3696-01A 75 years, female, stage:iv 3.5
TCGA-DY-A1DD-01A 77 years, female, white, stage:iiib 3.5
TCGA-AZ-5407-01A 51 years, female, white, stage:i 3.5
TCGA-AA-A00W-01A 80 years, male, stage:i 3.5
TCGA-F4-6808-01A 54 years, female, white, stage:i 3.4
TCGA-AH-6903-01A 46 years, male, white, stage:iiib 3.3
TCGA-AG-3726-01A 63 years, female, stage:i 3.3
TCGA-AH-6897-01A 48 years, male, white, stage:i 3.2
TCGA-AA-A02F-01A 68 years, female, stage:iv 3.2
TCGA-DM-A1DB-01A 68 years, male, white, stage:iia 3.2
TCGA-AA-3679-01A 59 years, male, stage:iv 3.2
TCGA-CA-6716-01A 65 years, male, asian, stage:iia 3.2
TCGA-AA-3542-01A 69 years, male, stage:iiic 3.2
TCGA-AG-A015-01A 64 years, female, stage:i 3.1
TCGA-A6-5662-01A 46 years, male, white, stage:iva 3.1
TCGA-G4-6626-01A 90 years, male, white, stage:iia 3.1
TCGA-AG-A002-01A 35 years, male, stage:i 3.1
TCGA-AA-3488-01A 58 years, male, stage:iv 3.1
TCGA-G4-6307-01A 37 years, female, white, stage:iiib 3.1
TCGA-AA-3519-01A 63 years, male, stage:iii 3.1
TCGA-DC-6160-01A 68 years, male, white, stage:i 3.1
TCGA-CI-6622-01A 74 years, male, white, stage:iib 3.1
TCGA-AY-A71X-01A 54 years, female, black or african american, stage:i 2.9
TCGA-AZ-4313-01A 51 years, female, white, stage:i 2.9
TCGA-D5-6532-01A 61 years, male, white, stage:iia 2.8
TCGA-D5-6537-01A 64 years, male, white, stage:iiib 2.8
TCGA-D5-6920-01A 77 years, female, white, stage:iia 2.6
TCGA-AA-3524-01A 85 years, male, stage:ii 2.6
TCGA-DM-A285-01A 71 years, female, white, stage:iv 2.5
TCGA-AG-3583-01A 66 years, male, stage:iv 2.5
TCGA-AY-A8YK-01A 44 years, male, black or african american, stage:iva 2.5
TCGA-CM-4743-01A 69 years, male, white, stage:iia 2.5
TCGA-DY-A1H8-01A 77 years, female, white, stage:iiia 2.4
TCGA-CK-4952-01A 48 years, female, white, stage:iiic 2.4
TCGA-CA-6715-01A 63 years, male, asian, stage:iiib 2.4
TCGA-EI-6509-01A 53 years, male, white, stage:iiic 2.3
TCGA-A6-6140-01A 62 years, male, white, stage:iia 2.3
TCGA-D5-5540-01A 73 years, male, white, stage:iia 2.3
TCGA-AZ-4614-01A 71 years, female, white, stage:iva 2.3
TCGA-AZ-4682-01B 61 years, male, white, stage:iva 2.3
TCGA-AG-3591-01A 66 years, female, stage:iia 2.2
TCGA-DM-A28E-01A 72 years, female, white, stage:iia 2.1
TCGA-AD-A5EK-01A 51 years, male, black or african american, stage:i 2.1
TCGA-AA-A029-01A 67 years, male, stage:ii 2.1
TCGA-A6-5666-01A 78 years, male, white, stage:iic 2.1
TCGA-DM-A282-01A 61 years, female, white, stage:iia 2.0
TCGA-AA-A02J-01A 70 years, female, stage:iv 2.0
TCGA-AA-3561-01A 72 years, male, stage:iia 2.0
TCGA-AH-6544-01A 60 years, male, white 2.0
TCGA-AA-A01G-01A 63 years, male, stage:iia 2.0
TCGA-CL-4957-01A 79 years, female 1.9
TCGA-G5-6641-01A 67 years, male, white, stage:iiia 1.9
TCGA-AA-A01T-01A 63 years, female, stage:iii 1.9
TCGA-DM-A1D4-01A 80 years, male, white, stage:iia 1.8
TCGA-A6-6650-01A 69 years, female, black or african american, stage:iia 1.8
TCGA-SS-A7HO-01A 44 years, female, black or african american, stage:iib 1.8
TCGA-G5-6233-01A 74 years, male, white 1.7
TCGA-DY-A1DG-01A 75 years, male, white, stage:iva 1.7
TCGA-DC-6682-01A 57 years, male, white, stage:iia 1.7
TCGA-CA-5255-01A 45 years, male, asian, stage:iia 1.7
TCGA-D5-6539-01A 45 years, female, white 1.7
TCGA-DM-A1D6-01A 88 years, male, white, stage:iia 1.7
TCGA-DM-A28K-01A 75 years, male, white, stage:iia 1.7
TCGA-AZ-6608-01A 55 years, female, white, stage:iiia 1.6
TCGA-AA-3979-01A 84 years, male, stage:iia 1.6
TCGA-CM-6675-01A 35 years, male, black or african american, stage:ivb 1.6
TCGA-AA-3525-01A 90 years, male, stage:iiib 1.6
TCGA-AD-6889-01A male, asian, stage:iia 1.6
TCGA-G4-6315-01A 66 years, male, white, stage:iv 1.6
TCGA-AA-3854-01A 71 years, female, stage:i 1.5
TCGA-DY-A1DF-01A 73 years, female, white, stage:iiic 1.5
TCGA-DM-A28H-01A 50 years, male, white, stage:iiic 1.5
TCGA-CM-4746-01A 61 years, male, black or african american, stage:i 1.4
TCGA-AA-3972-01A 72 years, male, stage:iv 1.4
TCGA-AA-3663-01A 42 years, male, stage:ii 1.4
TCGA-NH-A50T-01A 68 years, female, black or african american, stage:iia 1.3
TCGA-DM-A28C-01A 74 years, male, white, stage:iia 1.3
TCGA-NH-A8F7-01A 53 years, female, black or african american, stage:iia 1.3
TCGA-QG-A5YX-01A 61 years, female, black or african american, stage:iia 1.3
TCGA-RU-A8FL-01A 51 years, male, black or african american, stage:iiib 1.3
TCGA-T9-A92H-01A 82 years, male, black or african american, stage:iia 1.3
TCGA-AG-A016-01A 55 years, male, stage:iv 1.3
TCGA-DM-A28M-01A 63 years, male, white, stage:iia 1.2
TCGA-DM-A288-01A 68 years, male, white, stage:iiic 1.1
TCGA-G4-6304-01A 66 years, female, white, stage:iib 1.1
TCGA-DM-A1HA-01A 82 years, male, white, stage:iiic 1.1
TCGA-4T-AA8H-01A 42 years, female, black or african american, stage:iia 1.1
TCGA-D5-6538-01A 79 years, female, white, stage:iiib 1.0
TCGA-A6-6648-01A 56 years, male, white, stage:iva 1.0
TCGA-DM-A1DA-01A 71 years, female, white, stage:iiic 1.0
TCGA-AY-A54L-01A 74 years, female, black or african american, stage:i 1.0
TCGA-AA-A01S-01A 47 years, female, stage:iii 1.0
TCGA-AG-A020-01A 57 years, female, stage:iii 0.9
TCGA-G4-6317-01A 51 years, female, white, stage:iiic 0.9
TCGA-DM-A1D0-01A 79 years, female, white, stage:iia 0.9
Show all

Best separation

Median separation

Expression cutoffi

5-year survival for patients with higher expression than the expression cutoff.

4.2 FPKM 13.7 FPKM

5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

59% 60%

5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

72% 64%

Log-rank P valuei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

1.92e-1 8.73e-1

Interactive survival scatter plot (individual patient data)i

The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.

Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.




Stage:



TCGA RNA samplesi

RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM

27.1

Number of samples

438

Samples

Sample

Description

FPKM

TCGA-AA-A01P-01A 80 years, female, stage:iii 446.2
TCGA-D5-6534-01A 62 years, female, white, stage:iia 319.9
TCGA-A6-6651-01A 55 years, female, white, stage:iiib 257.8
TCGA-F4-6703-01A 64 years, male, white, stage:iia 242.7
TCGA-AD-6964-01A 58 years, male, white 222.6
TCGA-G4-6302-01A 90 years, female, white, stage:iia 204.6
TCGA-AY-6196-01A 47 years, male, white, stage:iiic 197.5
TCGA-F4-6807-01A 51 years, female, white, stage:iiic 191.4
TCGA-AD-6901-01A 78 years, male, white 184.2
TCGA-AA-3489-01A 75 years, male, stage:ii 166.1
TCGA-CM-5348-01A 72 years, male, white, stage:iiib 157.7
TCGA-F4-6569-01A 60 years, male, white, stage:i 150.3
TCGA-CM-6162-01A 48 years, female, white, stage:iiib 136.1
TCGA-AZ-4323-01A 37 years, male, white, stage:iv 127.0
TCGA-CA-6717-01A 57 years, male, asian, stage:iia 122.9
TCGA-AZ-6605-01A 78 years, male, white, stage:iiib 120.2
TCGA-D5-6928-01A 80 years, male, white, stage:iia 113.6
TCGA-DM-A1HB-01A 75 years, male, white, stage:iiib 108.0
TCGA-5M-AAT6-01A 40 years, female, black or african american, stage:iv 100.7
TCGA-CM-6169-01A 67 years, male, black or african american, stage:iia 98.9
TCGA-D5-6529-01A 69 years, male, white, stage:iia 97.0
TCGA-F4-6704-01A 60 years, male, american indian or alaska native, stage:iiic 92.9
TCGA-CM-6163-01A 74 years, male, white, stage:i 90.2
TCGA-AA-A00D-01A 70 years, male, stage:i 88.8
TCGA-A6-5664-01A 80 years, male, black or african american, stage:iiic 87.3
TCGA-A6-6782-01A 82 years, male, white, stage:iib 84.6
TCGA-A6-6654-01A 65 years, female, white, stage:iiib 84.2
TCGA-CM-6167-01A 57 years, female, black or african american, stage:iiic 84.2
TCGA-AA-3986-01A 73 years, male, stage:i 82.2
TCGA-F4-6809-01A 52 years, female, white, stage:iva 81.9
TCGA-G4-6625-01A 77 years, female, white, stage:iia 81.0
TCGA-G4-6299-01A 69 years, male, white, stage:iiic 66.6
TCGA-AA-A01R-01A 47 years, male, stage:iii 66.5
TCGA-CM-6168-01A 84 years, female, black or african american, stage:iia 66.2
TCGA-A6-6141-01A 31 years, male, black or african american, stage:iia 65.3
TCGA-G4-6303-01A 54 years, female, white, stage:iv 65.1
TCGA-CM-5341-01A 82 years, female, white, stage:iiia 61.9
TCGA-CK-4951-01A 79 years, female, white, stage:iia 61.8
TCGA-A6-2681-01A 73 years, female, white, stage:iia 61.8
TCGA-WS-AB45-01A female, black or african american, stage:iia 60.6
TCGA-A6-3808-01A 73 years, male, white, stage:iia 60.3
TCGA-AA-3966-01A 89 years, female, stage:iia 59.6
TCGA-A6-6781-01B 43 years, male, white, stage:iiic 59.1
TCGA-CM-6165-01A 74 years, male, white, stage:iia 59.1
TCGA-D5-6926-01A 65 years, male, white, stage:iiib 58.8
TCGA-A6-2675-01A 78 years, male, white, stage:iia 57.4
TCGA-A6-2685-01A 48 years, female, black or african american, stage:iia 57.0
TCGA-A6-4107-01A 57 years, female, white, stage:iiib 55.2
TCGA-AD-6899-01A 84 years, male, white, stage:iiic 53.8
TCGA-D5-6930-01A 67 years, male, white, stage:iia 53.0
TCGA-G4-6627-01A 84 years, male, white, stage:iia 52.4
TCGA-A6-6649-01A 66 years, male, white, stage:iiib 51.9
TCGA-CM-6170-01A 73 years, female, white, stage:i 51.7
TCGA-AA-3672-01A 90 years, female, stage:iii 50.6
TCGA-AA-3514-01A 81 years, female, stage:i 50.1
TCGA-AA-3866-01A 78 years, female, stage:i 49.3
TCGA-A6-2686-01A 81 years, female, white, stage:iia 49.3
TCGA-CM-4747-01A 47 years, male, white, stage:iva 48.6
TCGA-CK-4947-01B 46 years, female, white, stage:iiib 47.8
TCGA-CM-6677-01A 75 years, female, white, stage:iia 47.6
TCGA-A6-2679-01A 73 years, female, white, stage:iib 47.1
TCGA-D5-5541-01A 63 years, male, white, stage:iiib 46.2
TCGA-AA-3715-01A 77 years, male, stage:ii 45.0
TCGA-NH-A50V-01A 69 years, male, black or african american, stage:iiib 44.9
TCGA-A6-6138-01A 61 years, male, white, stage:i 44.5
TCGA-AA-3552-01A 85 years, male, stage:iiic 44.2
TCGA-A6-2674-01A 72 years, male, white, stage:iv 44.2
TCGA-F4-6459-01A 61 years, female, white, stage:iiib 43.8
TCGA-G4-6314-01A 76 years, female, white, stage:iv 43.3
TCGA-CM-6680-01A 78 years, female, white, stage:iiib 43.1
TCGA-AM-5821-01A 68 years, female, white, stage:iia 42.7
TCGA-CA-6719-01A 77 years, male, asian, stage:iia 42.2
TCGA-AA-3554-01A 62 years, female, stage:iia 42.2
TCGA-F4-6805-01A 58 years, female, white, stage:iia 42.1
TCGA-AA-3496-01A 83 years, female, stage:ii 41.8
TCGA-AD-5900-01A 67 years, male, white, stage:i 41.2
TCGA-D5-6922-01A 76 years, male, white, stage:iiia 41.0
TCGA-CM-5860-01A 44 years, male, white, stage:iia 40.8
TCGA-D5-6540-01A 66 years, male, white, stage:i 40.0
TCGA-A6-5657-01A 65 years, male, black or african american, stage:iiib 39.3
TCGA-AD-6895-01A 84 years, male, white, stage:iiib 38.9
TCGA-F4-6570-01A 78 years, female, white, stage:iia 38.4
TCGA-A6-5659-01A 82 years, male, white, stage:i 38.1
TCGA-3L-AA1B-01A 61 years, female, black or african american, stage:i 37.7
TCGA-AA-3544-01A 68 years, male, stage:i 37.1
TCGA-A6-3810-01A 63 years, male, white, stage:iia 36.9
TCGA-AA-3982-01A 75 years, male, stage:iiib 36.5
TCGA-D5-6924-01A 68 years, male, white, stage:iia 36.3
TCGA-A6-2671-01A 85 years, male, white, stage:iv 36.3
TCGA-CM-4752-01A 58 years, male, black or african american, stage:iia 35.7
TCGA-A6-5656-01B 74 years, male, white, stage:i 35.6
TCGA-A6-A5ZU-01A 59 years, male, black or african american, stage:iiib 35.5
TCGA-F4-6855-01A 70 years, female, white, stage:iia 35.4
TCGA-D5-6923-01A 57 years, male, white, stage:i 35.2
TCGA-G4-6628-01A 78 years, male, white, stage:i 35.1
TCGA-AU-3779-01A 80 years, female, white, stage:iia 35.0
TCGA-D5-5539-01A 60 years, male, white, stage:iiia 34.6
TCGA-AA-3856-01A 59 years, male, stage:iia 34.4
TCGA-AA-A01D-01A 47 years, female, stage:iiic 34.3
TCGA-AU-6004-01A 69 years, female, white, stage:i 34.2
TCGA-AZ-6607-01A 69 years, male, white, stage:iv 33.9
TCGA-A6-2682-01A 70 years, male, white, stage:iv 33.9
TCGA-G4-6295-01A 70 years, female, white, stage:ii 33.6
TCGA-G4-6297-01A 55 years, female, white, stage:iv 33.5
TCGA-AA-3553-01A 61 years, female, stage:i 33.0
TCGA-D5-6535-01A 80 years, female, white, stage:iiib 32.7
TCGA-F4-6461-01A 41 years, female, white, stage:iiic 32.7
TCGA-AA-A010-01A 46 years, female, stage:iib 32.5
TCGA-AA-3678-01A 60 years, female, stage:iii 32.5
TCGA-AA-3673-01A 53 years, female, stage:ii 32.3
TCGA-AD-6890-01A 65 years, male, white 32.2
TCGA-CM-5861-01A 63 years, female, white, stage:iia 32.1
TCGA-CM-6679-01A 58 years, male, white, stage:iia 31.9
TCGA-D5-6898-01A 51 years, female, white, stage:i 31.7
TCGA-AA-3841-01A 66 years, male, stage:iia 31.6
TCGA-AA-3812-01A 82 years, female, stage:iia 31.6
TCGA-AA-3877-01A 83 years, female, stage:i 31.5
TCGA-CM-4748-01A 53 years, male, white, stage:iiib 31.2
TCGA-F4-6460-01A 51 years, female, white, stage:iiib 30.8
TCGA-CM-6161-01A 36 years, female, white, stage:i 30.3
TCGA-NH-A6GA-01A 58 years, male, black or african american, stage:iiic 29.7
TCGA-G4-6311-01A 80 years, male, white, stage:iii 29.7
TCGA-A6-2677-01B 68 years, female, white, stage:iiic 29.6
TCGA-AZ-4684-01A 50 years, male, white, stage:iva 29.4
TCGA-CA-6718-01A 46 years, male, asian, stage:iia 29.2
TCGA-CM-5863-01A 60 years, female, white, stage:iiib 28.8
TCGA-D5-5538-01A 60 years, female, white, stage:iiib 28.5
TCGA-A6-6142-01A 56 years, female, white, stage:iva 27.8
TCGA-CM-6172-01A 70 years, female, white, stage:iiib 27.3
TCGA-AZ-6601-01A 68 years, male, white, stage:ii 26.7
TCGA-A6-2672-01B 82 years, female, white, stage:iiib 26.7
TCGA-CM-4751-01A 62 years, male, white, stage:iiib 26.4
TCGA-AA-3538-01A 54 years, female, stage:i 26.4
TCGA-AA-A00Q-01A 66 years, female, stage:iiib 26.0
TCGA-AY-4071-01A 63 years, female, white, stage:i 25.7
TCGA-AD-6548-01A 81 years, female, white, stage:i 25.6
TCGA-AA-3870-01A 71 years, female, stage:iv 25.3
TCGA-A6-4105-01A 79 years, male, white, stage:iia 25.1
TCGA-F4-6463-01A 51 years, male, white, stage:iia 25.0
TCGA-AA-A01K-01A 74 years, female, stage:iiic 25.0
TCGA-CK-5916-01A 71 years, female, white, stage:i 25.0
TCGA-AZ-6603-01A 77 years, female, white 24.8
TCGA-D5-6927-01A 34 years, male, white, stage:iia 24.5
TCGA-A6-A565-01A 34 years, female, black or african american, stage:iiic 24.1
TCGA-AA-A02R-01A 84 years, female, stage:iia 23.2
TCGA-AA-3543-01A 84 years, male, stage:i 23.1
TCGA-D5-6541-01A 49 years, male, white, stage:iia 23.1
TCGA-A6-5667-01A 40 years, female, white, stage:iiib 23.0
TCGA-CM-6166-01A 48 years, female, white, stage:i 22.9
TCGA-AY-4070-01A 51 years, female, black or african american, stage:iiic 22.8
TCGA-AA-3517-01A 60 years, male, stage:iia 22.8
TCGA-D5-6536-01A 73 years, male, white, stage:iia 22.6
TCGA-AA-3869-01A 76 years, male, stage:iv 22.5
TCGA-QG-A5Z1-01A 71 years, male, black or african american, stage:iiib 22.5
TCGA-AA-3851-01A 74 years, male, stage:iia 22.2
TCGA-AA-3532-01A 63 years, male, stage:iia 22.2
TCGA-AA-3971-01A 58 years, male, stage:iii 22.2
TCGA-AZ-4308-01A 47 years, female, white, stage:iiib 22.2
TCGA-CK-6747-01A 87 years, female, white, stage:iia 22.1
TCGA-AA-3867-01A 74 years, male, stage:iv 22.1
TCGA-AD-6963-01A 58 years, male, white 21.8
TCGA-CM-4750-01A 34 years, female, white, stage:iiia 21.6
TCGA-AA-3560-01A 72 years, female, stage:iiic 21.4
TCGA-A6-A566-01A 55 years, female, black or african american, stage:iiib 21.2
TCGA-F4-6854-01A 77 years, female, white, stage:iia 21.0
TCGA-D5-6931-01A 77 years, male, white, stage:iiic 20.8
TCGA-AA-A02W-01A 73 years, female, stage:i 20.7
TCGA-AA-3989-01A 84 years, male, stage:iv 20.7
TCGA-CM-6676-01A 82 years, male, white, stage:i 20.7
TCGA-AA-A00F-01A 66 years, male, stage:iiic 20.6
TCGA-AZ-4615-01A 84 years, male, white, stage:iiib 20.5
TCGA-AD-6965-01A 62 years, male, white, stage:iiic 20.4
TCGA-F4-6806-01A 59 years, female, white, stage:i 20.1
TCGA-AA-3975-01A 80 years, male, stage:i 19.9
TCGA-AA-A00N-01A 75 years, male, stage:iib 19.8
TCGA-AA-3556-01A 78 years, male, stage:i 19.7
TCGA-DM-A0XF-01A 68 years, female, white, stage:iiic 19.6
TCGA-AA-3837-01A 67 years, male, stage:iia 19.3
TCGA-AA-A00O-01A 83 years, female, stage:iiic 19.3
TCGA-CK-5912-01A 82 years, male, white, stage:i 19.1
TCGA-D5-6531-01A 75 years, male, white, stage:iia 19.1
TCGA-AA-3968-01A 55 years, female, stage:i 19.0
TCGA-AA-3949-01A 87 years, female, stage:iiib 18.7
TCGA-AA-A00J-01A 80 years, male, stage:iiib 18.2
TCGA-AA-3875-01A 78 years, female, stage:i 17.9
TCGA-AA-A017-01A 57 years, female, stage:iia 17.6
TCGA-AA-A01V-01A 59 years, male, stage:i 17.6
TCGA-AA-3511-01A 64 years, male, stage:ii 17.6
TCGA-AA-3862-01A 82 years, male, stage:iia 17.5
TCGA-D5-6530-01A 53 years, male, white, stage:i 17.3
TCGA-AZ-5403-01A 43 years, male, white, stage:ii 17.3
TCGA-D5-6929-01A 49 years, female, white, stage:iv 16.8
TCGA-AA-3815-01A 65 years, female, stage:iia 16.2
TCGA-AA-3548-01A 71 years, female, stage:iiic 16.2
TCGA-AA-3506-01A 77 years, male, stage:i 15.9
TCGA-AA-A004-01A 76 years, male, stage:iia 15.5
TCGA-AA-A01X-01A 80 years, female, stage:iii 15.5
TCGA-AA-3860-01A 53 years, female, stage:iiib 15.4
TCGA-D5-7000-01A 79 years, female, white, stage:i 15.3
TCGA-CA-5254-01A 42 years, female, asian, stage:iia 15.3
TCGA-A6-2684-01C 75 years, female, white, stage:i 15.3
TCGA-CK-4948-01B 45 years, female, white, stage:iii 15.3
TCGA-AA-A02O-01A 82 years, male, stage:ii 15.1
TCGA-CM-5349-01A 68 years, female, white, stage:iia 15.1
TCGA-CM-6678-01A 63 years, female, white, stage:iva 15.0
TCGA-NH-A5IV-01A 90 years, female, black or african american, stage:iia 14.9
TCGA-AA-3510-01A 70 years, male, stage:ii 14.8
TCGA-AA-3956-01A 65 years, male, stage:iia 14.7
TCGA-AA-3520-01A 86 years, female, stage:ii 14.6
TCGA-G4-6323-01A 50 years, male, black or african american, stage:ia 14.5
TCGA-AA-3831-01A 66 years, male, stage:iia 14.1
TCGA-AZ-6600-01A 64 years, male, black or african american, stage:iv 14.1
TCGA-AA-A03F-01A 90 years, female, stage:iii 14.0
TCGA-CM-6674-01A 39 years, male, white, stage:iia 14.0
TCGA-A6-6137-01A 55 years, male, white, stage:iiib 13.9
TCGA-AA-A00R-01A 64 years, female, stage:i 13.9
TCGA-A6-2678-01A 43 years, female, white, stage:iiib 13.8
TCGA-AA-3680-01A 67 years, female, stage:iv 13.7
TCGA-CM-6164-01A 46 years, female, white, stage:iia 13.7
TCGA-NH-A6GB-01A 71 years, female, black or african american, stage:iiic 13.7
TCGA-AA-3530-01A 80 years, male, stage:i 13.5
TCGA-AA-3818-01A 78 years, female, stage:iia 13.4
TCGA-AA-3846-01A 74 years, female, stage:iia 13.3
TCGA-AZ-6598-01A 77 years, female, white, stage:ii 13.3
TCGA-AA-3549-01A 69 years, male, stage:i 13.2
TCGA-AA-3495-01A 79 years, male, stage:i 13.2
TCGA-AA-3534-01A 78 years, female, stage:iia 13.1
TCGA-AA-3662-01A 80 years, female, stage:iv 12.9
TCGA-A6-2676-01A 75 years, female, white, stage:iib 12.9
TCGA-AA-3833-01A 63 years, female, stage:iia 12.8
TCGA-AA-A01C-01A 75 years, male, stage:iiia 12.8
TCGA-AD-6888-01A 73 years, male, white, stage:iiib 12.7
TCGA-AA-A00E-01A 65 years, male, stage:iia 12.5
TCGA-NH-A8F8-01A 79 years, male, black or african american, stage:iv 12.4
TCGA-G4-6294-01A 76 years, male, white, stage:iv 12.3
TCGA-QL-A97D-01A 84 years, female, black or african american, stage:i 12.2
TCGA-CK-6751-01A 88 years, female, white, stage:i 12.2
TCGA-5M-AATE-01A 76 years, male, black or african american, stage:iia 12.2
TCGA-DM-A28G-01A 75 years, male, white, stage:iia 12.1
TCGA-AA-3858-01A 67 years, male, stage:i 12.1
TCGA-AA-3710-01A 80 years, female, stage:iia 12.1
TCGA-AA-3950-01A 79 years, female, stage:iia 12.1
TCGA-AA-3821-01A 81 years, female, stage:i 11.9
TCGA-AA-3685-01A 69 years, male, stage:ii 11.9
TCGA-AA-A02E-01A 82 years, female, stage:iv 11.7
TCGA-AA-3509-01A 54 years, female, stage:ii 11.7
TCGA-AA-3980-01A 89 years, female, stage:i 11.4
TCGA-D5-5537-01A 83 years, male, white 11.4
TCGA-AA-3562-01A 82 years, male, stage:iiic 11.4
TCGA-A6-3807-01A 53 years, female, white, stage:iiic 11.4
TCGA-A6-2680-01A 72 years, female, black or african american, stage:ii 11.4
TCGA-AA-3502-01A 73 years, male, stage:i 11.3
TCGA-A6-6653-01A 82 years, male, white, stage:i 11.2
TCGA-CM-5864-01A 60 years, male, white, stage:i 11.1
TCGA-G4-6293-01A 49 years, female, white, stage:iii 11.1
TCGA-AA-3675-01A 84 years, male, stage:ii 11.0
TCGA-AA-3666-01A 68 years, male, stage:iii 11.0
TCGA-A6-6780-01A 74 years, male, white, stage:iia 11.0
TCGA-G4-6321-01A 60 years, female, white, stage:iii 10.9
TCGA-AZ-4315-01A 61 years, male, white, stage:iia 10.8
TCGA-AA-3655-01A 68 years, male, stage:ii 10.5
TCGA-F4-6856-01A 45 years, male, white, stage:i 10.4
TCGA-CM-5344-01A 39 years, female, white, stage:iiib 10.3
TCGA-AA-3713-01A 68 years, male, stage:iv 10.3
TCGA-AA-A00Z-01A 70 years, male, stage:iia 10.3
TCGA-QG-A5YW-01A 55 years, female, black or african american, stage:iiic 10.3
TCGA-AA-3973-01A 69 years, male, stage:iv 10.2
TCGA-AA-3667-01A 36 years, female, stage:i 10.2
TCGA-AA-3518-01A 81 years, female, stage:iia 10.2
TCGA-AA-3664-01A 74 years, female, stage:ii 10.1
TCGA-D5-6932-01A 69 years, male, white, stage:iia 10.1
TCGA-G4-6310-01A 69 years, male, white, stage:iiib 10.0
TCGA-AA-A00A-01A 80 years, male, stage:iia 9.9
TCGA-AA-A01Q-01A 48 years, female, stage:ii 9.9
TCGA-DM-A1D8-01A 50 years, female, white 9.7
TCGA-AA-3526-01A 57 years, male, stage:i 9.6
TCGA-AA-3977-01A 65 years, male 9.5
TCGA-AA-3861-01A 72 years, male, stage:iia 9.5
TCGA-AA-3848-01A 82 years, female, stage:iiic 9.3
TCGA-QG-A5Z2-01A 61 years, male, black or african american, stage:i 9.3
TCGA-CM-5868-01A 59 years, female, white, stage:iva 9.1
TCGA-CA-5256-01A 54 years, female, asian, stage:iia 9.0
TCGA-AA-3994-01A 69 years, male, stage:iiib 8.8
TCGA-AA-3930-01A 66 years, male, stage:iv 8.7
TCGA-A6-3809-01A 71 years, female, white, stage:iib 8.7
TCGA-AZ-6606-01A 81 years, male, white, stage:iv 8.5
TCGA-AA-A01I-01A 76 years, male, stage:i 8.4
TCGA-AA-3522-01A 67 years, male, stage:iia 8.4
TCGA-G4-6588-01A 58 years, female, white, stage:iia 8.3
TCGA-DM-A28A-01A 78 years, male, white, stage:iiic 8.2
TCGA-A6-5661-01A 80 years, female, black or african american, stage:iia 8.2
TCGA-AA-3692-01A 47 years, female, stage:iv 8.1
TCGA-G4-6586-01A 74 years, female, white, stage:iia 7.9
TCGA-CK-5913-01A 58 years, female, white, stage:iia 7.9
TCGA-AA-3555-01A 81 years, female, stage:iia 7.9
TCGA-AA-A03J-01A 65 years, female, stage:i 7.8
TCGA-A6-A56B-01A 57 years, male, black or african american, stage:iiib 7.7
TCGA-AY-6386-01A 66 years, female, black or african american, stage:iiib 7.7
TCGA-AA-3970-01A 65 years, male, stage:iia 7.5
TCGA-DM-A0XD-01A 65 years, male, white, stage:iia 7.5
TCGA-CA-5797-01A 56 years, male, asian, stage:iia 7.5
TCGA-AA-3941-01A 84 years, female, stage:iva 7.4
TCGA-AA-3947-01A 60 years, female, stage:iib 7.2
TCGA-CM-5862-01A 80 years, male, white, stage:iva 7.1
TCGA-A6-2683-01A 57 years, female, white, stage:iv 7.1
TCGA-G4-6298-01A 90 years, male, black or african american, stage:iiib 7.1
TCGA-CK-6748-01A 45 years, female, white, stage:iv 7.0
TCGA-AZ-4616-01A 82 years, female, white, stage:iv 6.9
TCGA-AA-A02Y-01A 73 years, male, stage:i 6.9
TCGA-AA-3494-01A 55 years, male, stage:iv 6.6
TCGA-DM-A280-01A 70 years, female, white, stage:iia 6.4
TCGA-AA-3688-01A 80 years, male, stage:iv 6.4
TCGA-AA-3681-01A 77 years, female, stage:iii 6.4
TCGA-AA-A02K-01A 50 years, male, stage:iv 6.4
TCGA-AA-3939-01A 83 years, male, stage:iia 6.2
TCGA-AA-A00K-01A 79 years, male, stage:iia 6.2
TCGA-AA-3660-01A 51 years, female, stage:ii 6.2
TCGA-CA-5796-01A 53 years, female, asian, stage:iia 6.2
TCGA-AA-3516-01A 74 years, female, stage:iii 6.1
TCGA-CK-4950-01A 68 years, female, black or african american, stage:iiib 6.1
TCGA-AA-A02H-01A 74 years, female, stage:iv 6.1
TCGA-AA-A01Z-01A 68 years, male, stage:ii 6.0
TCGA-D5-6533-01A 68 years, female, white 6.0
TCGA-DM-A1D7-01A 82 years, male, white, stage:iia 5.9
TCGA-A6-5660-01A 73 years, male, black or african american, stage:iiic 5.8
TCGA-A6-6652-01A 59 years, male, black or african american, stage:iva 5.8
TCGA-AA-3697-01A 77 years, male, stage:ii 5.8
TCGA-DM-A1D9-01A 67 years, female, white, stage:iia 5.8
TCGA-DM-A0X9-01A 71 years, female, white, stage:iia 5.7
TCGA-AA-3842-01A 51 years, male, stage:iiia 5.7
TCGA-AA-3811-01A 84 years, female, stage:iii 5.6
TCGA-AA-3976-01A 70 years, male, stage:iiia 5.5
TCGA-AA-A00U-01A 50 years, male, stage:iiib 5.4
TCGA-AA-3864-01A 71 years, male, stage:ii 5.4
TCGA-4N-A93T-01A 67 years, male, black or african american, stage:iiib 5.3
TCGA-NH-A6GC-01A 66 years, female, black or african american, stage:ivb 5.2
TCGA-QG-A5YV-01A 64 years, female, black or african american, stage:iiic 5.2
TCGA-AA-3952-01A 68 years, male, stage:iiic 5.2
TCGA-AA-3492-01A 90 years, female, stage:ii 5.2
TCGA-AA-3855-01A 72 years, male, stage:i 5.1
TCGA-CM-6171-01A 77 years, female, white, stage:i 5.1
TCGA-AA-3819-01A 41 years, female, stage:iia 4.9
TCGA-AA-A01F-01A 72 years, male, stage:iiib 4.9
TCGA-5M-AAT4-01A 74 years, male, black or african american, stage:iv 4.8
TCGA-G4-6322-01A 65 years, male, white, stage:iiib 4.8
TCGA-CK-5914-01A 81 years, male, white, stage:iiib 4.7
TCGA-CM-4744-01A 69 years, male, white, stage:i 4.7
TCGA-NH-A50U-01A 42 years, male, black or african american, stage:iva 4.6
TCGA-AM-5820-01A 60 years, female, white, stage:iva 4.4
TCGA-AZ-6599-01A 72 years, male, white, stage:i 4.3
TCGA-A6-5665-01A 84 years, female, white, stage:iia 4.1
TCGA-AA-A024-01A 81 years, male, stage:ii 4.1
TCGA-A6-A567-01A 56 years, male, black or african american, stage:iv 4.1
TCGA-AY-5543-01A 65 years, female, black or african american, stage:iva 4.0
TCGA-AA-3844-01A 78 years, female, stage:iiic 4.0
TCGA-AA-3955-01A 38 years, male, stage:iiib 4.0
TCGA-DM-A28F-01A 73 years, male, white, stage:iiib 3.9
TCGA-AA-A00L-01A 66 years, male, stage:iia 3.9
TCGA-AA-3531-01A 75 years, female, stage:iia 3.8
TCGA-G4-6320-01A 73 years, male, white, stage:iii 3.8
TCGA-G4-6309-01A 40 years, female, black or african american, stage:iiib 3.8
TCGA-AY-A69D-01A 55 years, female, black or african american, stage:iia 3.7
TCGA-AY-6197-01A 60 years, male, white, stage:iia 3.6
TCGA-G4-6306-01A 71 years, male, white 3.6
TCGA-AA-3696-01A 75 years, female, stage:iv 3.5
TCGA-AZ-5407-01A 51 years, female, white, stage:i 3.5
TCGA-AA-A00W-01A 80 years, male, stage:i 3.5
TCGA-F4-6808-01A 54 years, female, white, stage:i 3.4
TCGA-AA-A02F-01A 68 years, female, stage:iv 3.2
TCGA-DM-A1DB-01A 68 years, male, white, stage:iia 3.2
TCGA-AA-3679-01A 59 years, male, stage:iv 3.2
TCGA-CA-6716-01A 65 years, male, asian, stage:iia 3.2
TCGA-AA-3542-01A 69 years, male, stage:iiic 3.2
TCGA-A6-5662-01A 46 years, male, white, stage:iva 3.1
TCGA-G4-6626-01A 90 years, male, white, stage:iia 3.1
TCGA-AA-3488-01A 58 years, male, stage:iv 3.1
TCGA-G4-6307-01A 37 years, female, white, stage:iiib 3.1
TCGA-AA-3519-01A 63 years, male, stage:iii 3.1
TCGA-AY-A71X-01A 54 years, female, black or african american, stage:i 2.9
TCGA-AZ-4313-01A 51 years, female, white, stage:i 2.9
TCGA-D5-6532-01A 61 years, male, white, stage:iia 2.8
TCGA-D5-6537-01A 64 years, male, white, stage:iiib 2.8
TCGA-D5-6920-01A 77 years, female, white, stage:iia 2.6
TCGA-AA-3524-01A 85 years, male, stage:ii 2.6
TCGA-DM-A285-01A 71 years, female, white, stage:iv 2.5
TCGA-AY-A8YK-01A 44 years, male, black or african american, stage:iva 2.5
TCGA-CM-4743-01A 69 years, male, white, stage:iia 2.5
TCGA-CK-4952-01A 48 years, female, white, stage:iiic 2.4
TCGA-CA-6715-01A 63 years, male, asian, stage:iiib 2.4
TCGA-A6-6140-01A 62 years, male, white, stage:iia 2.3
TCGA-D5-5540-01A 73 years, male, white, stage:iia 2.3
TCGA-AZ-4614-01A 71 years, female, white, stage:iva 2.3
TCGA-AZ-4682-01B 61 years, male, white, stage:iva 2.3
TCGA-DM-A28E-01A 72 years, female, white, stage:iia 2.1
TCGA-AD-A5EK-01A 51 years, male, black or african american, stage:i 2.1
TCGA-AA-A029-01A 67 years, male, stage:ii 2.1
TCGA-A6-5666-01A 78 years, male, white, stage:iic 2.1
TCGA-DM-A282-01A 61 years, female, white, stage:iia 2.0
TCGA-AA-A02J-01A 70 years, female, stage:iv 2.0
TCGA-AA-3561-01A 72 years, male, stage:iia 2.0
TCGA-AA-A01G-01A 63 years, male, stage:iia 2.0
TCGA-AA-A01T-01A 63 years, female, stage:iii 1.9
TCGA-DM-A1D4-01A 80 years, male, white, stage:iia 1.8
TCGA-A6-6650-01A 69 years, female, black or african american, stage:iia 1.8
TCGA-SS-A7HO-01A 44 years, female, black or african american, stage:iib 1.8
TCGA-CA-5255-01A 45 years, male, asian, stage:iia 1.7
TCGA-D5-6539-01A 45 years, female, white 1.7
TCGA-DM-A1D6-01A 88 years, male, white, stage:iia 1.7
TCGA-DM-A28K-01A 75 years, male, white, stage:iia 1.7
TCGA-AZ-6608-01A 55 years, female, white, stage:iiia 1.6
TCGA-AA-3979-01A 84 years, male, stage:iia 1.6
TCGA-CM-6675-01A 35 years, male, black or african american, stage:ivb 1.6
TCGA-AA-3525-01A 90 years, male, stage:iiib 1.6
TCGA-AD-6889-01A male, asian, stage:iia 1.6
TCGA-G4-6315-01A 66 years, male, white, stage:iv 1.6
TCGA-AA-3854-01A 71 years, female, stage:i 1.5
TCGA-DM-A28H-01A 50 years, male, white, stage:iiic 1.5
TCGA-CM-4746-01A 61 years, male, black or african american, stage:i 1.4
TCGA-AA-3972-01A 72 years, male, stage:iv 1.4
TCGA-AA-3663-01A 42 years, male, stage:ii 1.4
TCGA-NH-A50T-01A 68 years, female, black or african american, stage:iia 1.3
TCGA-DM-A28C-01A 74 years, male, white, stage:iia 1.3
TCGA-NH-A8F7-01A 53 years, female, black or african american, stage:iia 1.3
TCGA-QG-A5YX-01A 61 years, female, black or african american, stage:iia 1.3
TCGA-RU-A8FL-01A 51 years, male, black or african american, stage:iiib 1.3
TCGA-T9-A92H-01A 82 years, male, black or african american, stage:iia 1.3
TCGA-DM-A28M-01A 63 years, male, white, stage:iia 1.2
TCGA-DM-A288-01A 68 years, male, white, stage:iiic 1.1
TCGA-G4-6304-01A 66 years, female, white, stage:iib 1.1
TCGA-DM-A1HA-01A 82 years, male, white, stage:iiic 1.1
TCGA-4T-AA8H-01A 42 years, female, black or african american, stage:iia 1.1
TCGA-D5-6538-01A 79 years, female, white, stage:iiib 1.0
TCGA-A6-6648-01A 56 years, male, white, stage:iva 1.0
TCGA-DM-A1DA-01A 71 years, female, white, stage:iiic 1.0
TCGA-AY-A54L-01A 74 years, female, black or african american, stage:i 1.0
TCGA-AA-A01S-01A 47 years, female, stage:iii 1.0
TCGA-G4-6317-01A 51 years, female, white, stage:iiic 0.9
TCGA-DM-A1D0-01A 79 years, female, white, stage:iia 0.9
Show all

Best separation

Median separation

Expression cutoffi

5-year survival for patients with higher expression than the expression cutoff.

4.7 FPKM 10.5 FPKM

5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

62% 56%

5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

0% 47%

Log-rank P valuei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

4.39e-2 2.55e-1

Interactive survival scatter plot (individual patient data)i

The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.

Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.




Stage:


TCGA RNA samplesi

RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM

22.3

Number of samples

159

Samples

Sample

Description

FPKM

TCGA-AF-2690-01A 77 years, female, white, stage:iiic 239.5
TCGA-EI-7004-01A 37 years, female, white 164.8
TCGA-F5-6465-01A 64 years, female, white, stage:iia 148.7
TCGA-DC-6158-01A 70 years, male, white, stage:i 129.6
TCGA-AG-3901-01A 67 years, female, stage:iiib 93.6
TCGA-DC-6156-01A 62 years, male, white, stage:iva 86.2
TCGA-F5-6571-01A 62 years, female, white, stage:iia 86.1
TCGA-F5-6864-01A 74 years, female, white, stage:iiib 82.2
TCGA-AF-2687-01A 57 years, male, white, stage:iiic 81.0
TCGA-F5-6812-01A 67 years, male, white, stage:iia 75.7
TCGA-CI-6624-01C 53 years, female, white, stage:i 70.4
TCGA-AG-3731-01A 65 years, male, stage:iv 66.7
TCGA-G5-6572-01A 56 years, male, white 65.9
TCGA-AH-6547-01A 79 years, female, white 59.4
TCGA-AG-3882-01A 66 years, female, stage:i 57.2
TCGA-F5-6813-01A 70 years, male, white, stage:iiic 51.1
TCGA-AG-3890-01A 62 years, male, stage:i 47.1
TCGA-F5-6464-01A 77 years, female, white, stage:iiic 46.0
TCGA-AG-3728-01A 73 years, male, stage:iiib 45.8
TCGA-AG-4022-01A 59 years, female, stage:ii 44.9
TCGA-AH-6644-01A 73 years, male, white 44.6
TCGA-AG-3575-01A 51 years, male, stage:ii 44.6
TCGA-AG-3732-01A 78 years, female, stage:i 43.4
TCGA-F5-6811-01A 72 years, female, white, stage:iia 40.2
TCGA-DC-6681-01A 70 years, female, white, stage:iva 39.2
TCGA-BM-6198-01A 73 years, male, white, stage:iiib 38.1
TCGA-AG-A02G-01A 66 years, male, stage:iv 36.1
TCGA-AG-3881-01A 83 years, female, stage:iia 34.7
TCGA-EI-6507-01A 60 years, male, white, stage:iia 34.2
TCGA-AG-4001-01A 74 years, female, stage:iia 32.2
TCGA-EI-6511-01A 52 years, male, white, stage:iiib 32.2
TCGA-AF-A56K-01A 56 years, male, black or african american, stage:iia 30.5
TCGA-AG-3878-01A 64 years, male, stage:i 30.4
TCGA-AG-A036-01A 71 years, male, stage:iii 29.0
TCGA-AG-3612-01A 55 years, female, stage:iiib 28.8
TCGA-EI-6884-01A 71 years, male, white, stage:iiia 27.4
TCGA-EI-7002-01A 58 years, male, white, stage:iv 25.2
TCGA-AG-3609-01A 65 years, female, stage:iiic 25.0
TCGA-AG-4008-01A 63 years, male, stage:iia 25.0
TCGA-AF-6655-01A 66 years, male, white, stage:iiia 24.9
TCGA-EI-6917-01A 33 years, male, white, stage:iiia 24.9
TCGA-F5-6702-01A 71 years, male, white, stage:iva 24.5
TCGA-AG-3902-01A 61 years, male, stage:iia 24.3
TCGA-EI-6883-01A 63 years, male, white, stage:iic 24.3
TCGA-AF-2691-01A 48 years, female, white, stage:i 23.9
TCGA-EI-6885-01A 57 years, female, white, stage:iv 23.5
TCGA-CI-6621-01A 63 years, male, white, stage:iiib 23.3
TCGA-DC-6683-01A 43 years, male, white, stage:iiib 23.3
TCGA-DC-5869-01A 62 years, female, black or african american, stage:iiib 22.7
TCGA-CI-6619-01B 41 years, male, white, stage:iv 22.5
TCGA-AF-3400-01A 54 years, male, white, stage:iia 21.1
TCGA-AG-A00Y-01A 68 years, male, stage:iia 20.9
TCGA-AG-A00H-01A 75 years, male, stage:iia 20.8
TCGA-AF-A56N-01A 47 years, female, black or african american, stage:iia 20.2
TCGA-EI-6514-01A 59 years, female, white, stage:iia 20.1
TCGA-AG-3582-01A 75 years, male, stage:iv 19.5
TCGA-AG-3883-01A 69 years, male, stage:i 19.1
TCGA-AG-3584-01A 60 years, male, stage:iv 18.6
TCGA-DC-6154-01A 57 years, female, white, stage:iva 17.7
TCGA-DC-6157-01A 48 years, male, black or african american, stage:i 17.7
TCGA-AG-3587-01A 65 years, male, stage:i 17.4
TCGA-AF-6136-01A 72 years, female, white, stage:iiib 17.1
TCGA-AG-3580-01A 67 years, male, stage:i 16.9
TCGA-AF-4110-01A 77 years, male, white, stage:iva 16.5
TCGA-DY-A0XA-01A 57 years, female, white, stage:iia 16.2
TCGA-DT-5265-01A 51 years, male, asian, stage:ii 15.7
TCGA-AG-A023-01A 62 years, female, stage:iv 15.7
TCGA-CI-6623-01B 44 years, male, white, stage:i 14.8
TCGA-F5-6861-01A 60 years, female, white, stage:iia 14.6
TCGA-AG-3898-01A 61 years, male, stage:iia 13.9
TCGA-AG-3893-01A 74 years, male, stage:iiib 13.6
TCGA-EF-5831-01A 72 years, male, white, stage:iia 13.0
TCGA-AG-4007-01A 87 years, male, stage:iv 12.9
TCGA-AG-A011-01A 80 years, male, stage:iia 12.8
TCGA-AG-A025-01A 62 years, female, stage:i 11.7
TCGA-AG-3608-01A 79 years, female, stage:iia 11.0
TCGA-CI-6620-01A 41 years, female, white, stage:iva 10.7
TCGA-DY-A1DC-01A 72 years, female, white, stage:iia 10.6
TCGA-EI-6508-01A 48 years, female, white, stage:iiib 10.6
TCGA-AG-3578-01A 76 years, female, stage:iia 10.5
TCGA-AH-6643-01A 50 years, male, white, stage:iiic 10.4
TCGA-AG-3727-01A 78 years, female, stage:iii 10.1
TCGA-AG-3574-01A 89 years, female, stage:ii 9.8
TCGA-AG-3592-01A 68 years, male, stage:iia 9.8
TCGA-AG-A032-01A 68 years, male, stage:iiib 9.6
TCGA-AF-3911-01A 48 years, male, white, stage:iiic 9.6
TCGA-AG-3885-01A 71 years, female, stage:iiib 9.5
TCGA-AG-3581-01A 63 years, male, stage:i 9.4
TCGA-AG-A01N-01A 68 years, female, stage:iv 9.4
TCGA-AH-6549-01A 66 years, male, white 9.3
TCGA-AG-3594-01A 77 years, male, stage:iia 9.3
TCGA-AG-3909-01A 69 years, female, stage:iiib 9.2
TCGA-AG-3600-01A 62 years, male, stage:iiic 9.1
TCGA-AG-3593-01A 72 years, female, stage:iia 9.1
TCGA-AF-2693-01A 75 years, male, white, stage:i 8.9
TCGA-AG-3887-01A 68 years, male, stage:iia 8.1
TCGA-F5-6863-01A 71 years, female, white, stage:iiib 8.1
TCGA-EF-5830-01A 54 years, male, white, stage:iib 7.7
TCGA-AF-A56L-01A 48 years, female, black or african american, stage:iiic 7.6
TCGA-AG-3611-01A 72 years, male, stage:iia 7.5
TCGA-AG-A008-01A 50 years, female, stage:i 7.3
TCGA-AG-4021-01A 84 years, female, stage:iv 7.3
TCGA-AF-6672-01A 43 years, male, white, stage:iv 7.2
TCGA-AG-3742-01A 85 years, female, stage:i 7.1
TCGA-EI-6510-01A 77 years, female, white 7.1
TCGA-AG-3892-01A 57 years, female, stage:i 6.7
TCGA-DY-A1DE-01A 56 years, female, white, stage:iia 6.5
TCGA-AG-3896-01A 85 years, female, stage:i 6.3
TCGA-AG-A026-01A 66 years, male, stage:ii 6.2
TCGA-AG-3599-01A 70 years, male, stage:i 6.1
TCGA-EI-6881-01A 60 years, male, white, stage:iiia 6.0
TCGA-AG-A02X-01A 77 years, male, stage:i 6.0
TCGA-AG-4005-01A 64 years, male, stage:iv 5.9
TCGA-AF-2692-01A 54 years, female, white, stage:iia 5.7
TCGA-AG-A02N-01A 67 years, male, stage:ii 5.7
TCGA-AG-3999-01A 61 years, female, stage:iiic 5.7
TCGA-AG-A014-01A 86 years, male, stage:i 5.7
TCGA-AG-A01J-01A 59 years, female, stage:iia 5.6
TCGA-EI-6512-01A 64 years, female, white, stage:iiib 5.6
TCGA-DC-4749-01A 57 years, male, white, stage:i 5.5
TCGA-DC-5337-01A 69 years, male, white, stage:i 5.2
TCGA-AG-A00C-01A 49 years, female, stage:iiib 5.1
TCGA-DC-6155-01A 31 years, female, white, stage:iiia 5.1
TCGA-EI-6513-01A 59 years, male, white, stage:iiib 5.1
TCGA-AG-3725-01A 90 years, female, stage:iii 5.1
TCGA-AG-3598-01A 69 years, male, stage:iia 4.9
TCGA-CL-5917-01A 71 years, female, white, stage:iiic 4.7
TCGA-AG-3586-01A 72 years, female, stage:iii 4.7
TCGA-AG-3894-01A 65 years, male, stage:iia 4.5
TCGA-AF-5654-01A 73 years, female, white, stage:i 4.3
TCGA-EI-6506-01A 78 years, female, white, stage:iia 4.3
TCGA-DC-4745-01A 49 years, female, white, stage:iiib 4.3
TCGA-AF-3913-01A 60 years, male, black or african american, stage:iv 4.3
TCGA-EI-6882-01A 59 years, male, white, stage:iia 4.2
TCGA-G5-6235-01A 72 years, male, white, stage:iiib 4.2
TCGA-AG-3605-01A 85 years, female, stage:iv 3.7
TCGA-F5-6814-01A 57 years, male, white, stage:iia 3.7
TCGA-CL-5918-01A 90 years, female, white, stage:iia 3.7
TCGA-DY-A1DD-01A 77 years, female, white, stage:iiib 3.5
TCGA-AH-6903-01A 46 years, male, white, stage:iiib 3.3
TCGA-AG-3726-01A 63 years, female, stage:i 3.3
TCGA-AH-6897-01A 48 years, male, white, stage:i 3.2
TCGA-AG-A015-01A 64 years, female, stage:i 3.1
TCGA-AG-A002-01A 35 years, male, stage:i 3.1
TCGA-DC-6160-01A 68 years, male, white, stage:i 3.1
TCGA-CI-6622-01A 74 years, male, white, stage:iib 3.1
TCGA-AG-3583-01A 66 years, male, stage:iv 2.5
TCGA-DY-A1H8-01A 77 years, female, white, stage:iiia 2.4
TCGA-EI-6509-01A 53 years, male, white, stage:iiic 2.3
TCGA-AG-3591-01A 66 years, female, stage:iia 2.2
TCGA-AH-6544-01A 60 years, male, white 2.0
TCGA-CL-4957-01A 79 years, female 1.9
TCGA-G5-6641-01A 67 years, male, white, stage:iiia 1.9
TCGA-G5-6233-01A 74 years, male, white 1.7
TCGA-DY-A1DG-01A 75 years, male, white, stage:iva 1.7
TCGA-DC-6682-01A 57 years, male, white, stage:iia 1.7
TCGA-DY-A1DF-01A 73 years, female, white, stage:iiic 1.5
TCGA-AG-A016-01A 55 years, male, stage:iv 1.3
TCGA-AG-A020-01A 57 years, female, stage:iii 0.9
Show all

COLORECTAL CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody HPA003563

Antibody HPA020432

Antibody CAB004209

 Antibody staining
  High
  Medium
  Low
  Not detected
    
 Intensity
  Strong
  Moderate
  Weak
  Negative
    
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
    
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
    

Click images for details

























































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