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PATHOLOGY ATLAS LIVER CANCER

GENE/PROTEIN

Antibody validation

Dictionary

Liver cancer

LIVER CANCER - Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival, using best separation (to the left) and median separation (to the right). Patients were divided based on level of expression into one of the two groups "low" or "high". Below each Kaplan-Meier plot, corresponding expression cutoff, 5-year survival for patients with high expression, 5-year survival for patients with low expression and log-rank P value are displayed. For melanoma and glioma, 3-year survival is shown. The survival analysis is described in Assays & Annotation.

The tabs at the top of the survival analysis section can be used to switch between the different cancer subtypes.

Best separation

Median separation

Expression cutoffi

5-year survival for patients with higher expression than the expression cutoff.

1592.7 FPKM 1154.4 FPKM

5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

61% 51%

5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

40% 42%

Log-rank P valuei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

8.11e-4 (Prognostic, favourable) 8.38e-3

Interactive survival scatter plot (individual patient data)i

The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.

Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.




Stage:


TCGA RNA samplesi

RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM

1213.6

Number of samples

365

Samples

Sample

Description

FPKM

TCGA-2Y-A9GU-01A 55 years, female, white, stage:i 3130.2
TCGA-CC-A123-01A 24 years, female, asian, stage:iiia 2923.3
TCGA-ZP-A9D0-01A 67 years, female, black or african american 2826.3
TCGA-DD-AADY-01A 55 years, female, asian, stage:i 2756.4
TCGA-2Y-A9GV-01A 54 years, female, white, stage:i 2703.6
TCGA-DD-AADV-01A 50 years, male, asian, stage:i 2667.8
TCGA-LG-A6GG-01A 79 years, female, white, stage:ii 2665.5
TCGA-DD-AADI-01A 43 years, female, asian, stage:i 2659.6
TCGA-BC-A5W4-01A 69 years, male, white, stage:iiia 2640.3
TCGA-DD-AADP-01A 45 years, male, asian, stage:i 2610.1
TCGA-DD-A4NL-01A 46 years, male, white, stage:i 2588.2
TCGA-DD-AACF-01A 68 years, male, asian, stage:i 2542.3
TCGA-DD-A4NO-01A 66 years, male, white, stage:i 2539.7
TCGA-DD-A3A5-01A 66 years, female, white, stage:iii 2503.0
TCGA-GJ-A9DB-01A 68 years, male, white, stage:i 2487.7
TCGA-ZP-A9D1-01A 56 years, female, white 2486.8
TCGA-DD-AAC9-01A 51 years, male, asian, stage:i 2428.5
TCGA-2Y-A9GT-01A 51 years, male, white, stage:i 2423.2
TCGA-G3-AAV0-01A 58 years, male, asian, stage:i 2411.8
TCGA-2Y-A9H9-01A 70 years, male, white, stage:i 2383.0
TCGA-G3-A5SI-01A 44 years, male, asian, stage:ii 2365.7
TCGA-ZP-A9CY-01A 66 years, female, white 2281.9
TCGA-XR-A8TG-01A 59 years, male, white, stage:i 2270.4
TCGA-DD-A11B-01A 73 years, male, white, stage:i 2261.9
TCGA-DD-A39Z-01A 43 years, female, stage:ii 2217.7
TCGA-KR-A7K2-01A 64 years, male, white, stage:i 2210.7
TCGA-DD-AAD3-01A 43 years, male, asian, stage:i 2210.6
TCGA-DD-AACY-01A 61 years, male, asian, stage:i 2209.9
TCGA-3K-AAZ8-01A 65 years, male, black or african american, stage:iiib 2182.5
TCGA-G3-A3CJ-01A 52 years, male, american indian or alaska native, stage:ii 2167.6
TCGA-DD-AACT-01A 69 years, female, asian, stage:i 2150.8
TCGA-2Y-A9GW-01A 64 years, male, white, stage:i 2148.5
TCGA-DD-AADO-01A 55 years, male, asian, stage:i 2140.2
TCGA-DD-A11D-01A 57 years, female, white, stage:i 2117.8
TCGA-ED-A7XP-01A 53 years, female, asian, stage:ii 2112.1
TCGA-BD-A3EP-01A 76 years, female, black or african american, stage:i 2104.5
TCGA-DD-AAEI-01A 72 years, male, asian, stage:i 2089.3
TCGA-2Y-A9H1-01A 58 years, male, white, stage:i 2084.4
TCGA-2Y-A9GZ-01A 82 years, female, white, stage:ii 2078.4
TCGA-DD-AACI-01A 69 years, male, asian, stage:ii 2077.4
TCGA-ZS-A9CE-01A 79 years, female, white, stage:ii 2075.3
TCGA-DD-AAW0-01A 54 years, male, asian, stage:i 2045.6
TCGA-DD-AACV-01A 53 years, male, asian, stage:i 2038.8
TCGA-RC-A7SK-01A 59 years, male, asian, stage:i 2016.0
TCGA-DD-A1EK-01A 64 years, female, white, stage:ivb 2007.5
TCGA-BC-A10X-01A 52 years, female, white, stage:iiia 1962.4
TCGA-DD-AAE4-01A 49 years, female, asian, stage:i 1962.2
TCGA-DD-AACS-01A 39 years, male, asian, stage:i 1943.3
TCGA-2Y-A9HB-01A 66 years, male, stage:i 1902.5
TCGA-DD-AAVZ-01A 38 years, male, asian, stage:i 1882.2
TCGA-BC-A217-01A 75 years, female, white, stage:ii 1880.3
TCGA-DD-AAVQ-01A 38 years, male, asian, stage:i 1879.5
TCGA-FV-A496-01A 84 years, female, white, stage:i 1865.4
TCGA-QA-A7B7-01A 48 years, male, black or african american, stage:ii 1863.4
TCGA-ED-A627-01A 74 years, male, white, stage:i 1856.7
TCGA-DD-A1ED-01A 68 years, male, white, stage:i 1852.5
TCGA-DD-AAVY-01A 56 years, male, asian, stage:iiia 1849.8
TCGA-DD-A1EA-01A 68 years, male, asian, stage:ii 1845.2
TCGA-ES-A2HT-01A 54 years, male, black or african american, stage:i 1828.1
TCGA-MI-A75E-01A 61 years, male, white, stage:iiic 1827.5
TCGA-DD-A1EH-01A 23 years, male, white, stage:iii 1821.7
TCGA-DD-AAD2-01A 66 years, male, asian, stage:i 1800.5
TCGA-DD-A11C-01A 69 years, male, white, stage:i 1799.2
TCGA-DD-A4ND-01A 56 years, female, white, stage:i 1796.3
TCGA-DD-A4NE-01A 75 years, female, white, stage:iiia 1792.6
TCGA-HP-A5N0-01A 88 years, female 1763.0
TCGA-ZS-A9CF-01A 64 years, male, white, stage:ii 1759.2
TCGA-BC-A10T-01A 76 years, male, white 1745.1
TCGA-DD-AAVW-01A 35 years, male, asian, stage:i 1744.8
TCGA-G3-A6UC-01A 65 years, male, white, stage:iiib 1729.9
TCGA-FV-A2QQ-01A 80 years, male, white, stage:i 1715.5
TCGA-XR-A8TC-01A 43 years, female, white, stage:i 1709.3
TCGA-DD-AAVX-01A 38 years, male, asian, stage:ii 1708.2
TCGA-DD-AADK-01A 68 years, female, asian, stage:ii 1706.3
TCGA-O8-A75V-01A 54 years, male, stage:i 1705.7
TCGA-ES-A2HS-01A 80 years, male, white, stage:i 1699.9
TCGA-5R-AAAM-01A 65 years, female, white, stage:ii 1696.6
TCGA-DD-A73G-01A 73 years, female, white, stage:i 1682.4
TCGA-DD-AADJ-01A 70 years, female, asian, stage:i 1677.0
TCGA-DD-AADQ-01A 59 years, male, asian, stage:ii 1661.0
TCGA-CC-5262-01A 67 years, male, asian, stage:iiic 1659.9
TCGA-ED-A7PY-01A 20 years, female, asian, stage:ii 1655.4
TCGA-BC-A110-01A 51 years, female, black or african american 1653.3
TCGA-ED-A459-01A 47 years, male, asian, stage:ii 1653.2
TCGA-G3-A3CG-01A 80 years, male, white, stage:i 1649.0
TCGA-5C-A9VH-01A 70 years, male, white, stage:i 1633.2
TCGA-2Y-A9H7-01A 81 years, female, white, stage:i 1622.7
TCGA-DD-A118-01A 77 years, female, white, stage:ii 1621.8
TCGA-FV-A3R2-01A 75 years, male, white, stage:i 1620.9
TCGA-DD-A73C-01A 65 years, female, white, stage:iiia 1617.3
TCGA-DD-AAVU-01A 46 years, male, asian, stage:ii 1616.5
TCGA-FV-A3R3-01A 38 years, female, white, stage:i 1610.2
TCGA-DD-AADS-01A 63 years, male, asian, stage:i 1607.1
TCGA-DD-A1EG-01A 77 years, male, white, stage:i 1604.0
TCGA-G3-A25Z-01A 58 years, male, asian, stage:i 1598.2
TCGA-DD-AACO-01A 40 years, male, asian, stage:i 1596.9
TCGA-DD-A113-01A 55 years, female, white, stage:ii 1594.1
TCGA-DD-AADM-01A 58 years, male, asian, stage:ii 1591.3
TCGA-CC-A9FS-01A 55 years, male, asian, stage:ii 1590.9
TCGA-BD-A3ER-01A 62 years, male, white, stage:ii 1568.8
TCGA-BC-A10S-01A 81 years, male, white 1560.4
TCGA-2Y-A9H6-01A 68 years, female, white, stage:i 1551.3
TCGA-DD-AAE2-01A 51 years, male, asian, stage:i 1549.4
TCGA-BW-A5NO-01A 50 years, male, black or african american, stage:iiia 1546.6
TCGA-DD-A3A1-01A 65 years, male, stage:iiia 1540.5
TCGA-DD-A4NI-01A 67 years, male, white, stage:ii 1540.3
TCGA-ZS-A9CD-01A 73 years, male, white, stage:ii 1539.8
TCGA-BC-A10R-01A 66 years, female, white 1537.3
TCGA-LG-A9QD-01A 68 years, male, white, stage:iiia 1533.8
TCGA-DD-AACN-01A 32 years, male, asian, stage:i 1514.9
TCGA-G3-A7M5-01A 76 years, male, asian, stage:i 1510.4
TCGA-G3-A7M8-01A 31 years, male, asian, stage:i 1509.1
TCGA-EP-A2KA-01A 52 years, female, white, stage:iiia 1506.9
TCGA-T1-A6J8-01A 68 years, male, white 1505.8
TCGA-ZP-A9D2-01A 51 years, male, white 1494.2
TCGA-DD-A3A7-01A 67 years, male, stage:iiib 1481.8
TCGA-DD-A4NK-01A 80 years, female, white, stage:iiia 1481.4
TCGA-EP-A2KC-01A 62 years, male, black or african american, stage:i 1480.8
TCGA-G3-A5SK-01A 58 years, male, white, stage:i 1479.5
TCGA-PD-A5DF-01A 58 years, female, white, stage:iiib 1479.2
TCGA-BD-A2L6-01A 69 years, male, white 1476.0
TCGA-4R-AA8I-01A 66 years, male, white, stage:ii 1469.2
TCGA-DD-A4NP-01A 32 years, male, white, stage:i 1458.8
TCGA-K7-A5RF-01A 64 years, male, white, stage:i 1458.2
TCGA-FV-A495-01A 51 years, female, white, stage:ii 1453.7
TCGA-ED-A4XI-01A 58 years, male, asian, stage:ii 1450.0
TCGA-DD-A73B-01A 72 years, female, white, stage:i 1449.5
TCGA-2Y-A9GX-01A 68 years, male, white, stage:i 1439.7
TCGA-WQ-AB4B-01A 62 years, male, white, stage:ii 1439.2
TCGA-FV-A3I1-01A female, white, stage:ii 1438.0
TCGA-BC-4073-01B 73 years, male, white, stage:iiia 1434.5
TCGA-DD-A73F-01A 77 years, female, white, stage:i 1431.5
TCGA-BC-A69I-01A 69 years, male, white, stage:i 1430.9
TCGA-DD-A4NN-01A 56 years, female, white, stage:i 1429.1
TCGA-DD-A115-01A 53 years, male, white, stage:iiia 1427.0
TCGA-G3-AAV2-01A 50 years, male, white, stage:i 1426.1
TCGA-FV-A23B-01A 70 years, female, white, stage:ii 1425.6
TCGA-YA-A8S7-01A 69 years, male, white, stage:iiia 1423.6
TCGA-DD-A3A9-01A 64 years, female, white, stage:ivb 1422.8
TCGA-DD-A1EE-01A 73 years, male, white, stage:iiia 1408.0
TCGA-BC-A10U-01A 69 years, male, white 1395.4
TCGA-CC-A9FW-01A 68 years, male, asian, stage:iiia 1394.4
TCGA-DD-AAVS-01A 56 years, male, asian, stage:i 1393.5
TCGA-DD-A1EB-01A 72 years, female, stage:i 1393.3
TCGA-DD-AAE7-01A 72 years, male, asian, stage:i 1376.4
TCGA-RC-A6M5-01A 20 years, female, white, stage:iva 1375.6
TCGA-2Y-A9H8-01A 85 years, female, white 1374.7
TCGA-ED-A7XO-01A 29 years, male, asian, stage:iiia 1374.1
TCGA-MR-A520-01A 58 years, male, white, stage:i 1353.7
TCGA-DD-AAE1-01A 52 years, male, asian, stage:i 1336.9
TCGA-GJ-A6C0-01A 75 years, female, white, stage:ii 1333.8
TCGA-MI-A75I-01A 61 years, male, black or african american 1324.8
TCGA-UB-A7ME-01A 51 years, male, asian, stage:i 1313.8
TCGA-G3-A3CI-01A 71 years, male, white, stage:i 1313.4
TCGA-G3-A25V-01A 68 years, male, white, stage:i 1311.4
TCGA-DD-AADF-01A 64 years, female, asian, stage:i 1309.6
TCGA-DD-A3A4-01A 37 years, male, white, stage:iiia 1308.0
TCGA-UB-A7MA-01A 62 years, female, white, stage:ii 1302.6
TCGA-G3-A5SJ-01A 59 years, male, white, stage:i 1302.2
TCGA-DD-AADW-01A 48 years, male, asian, stage:i 1292.7
TCGA-ED-A8O5-01A 59 years, female, asian, stage:iiia 1291.4
TCGA-WX-AA44-01A 64 years, female, white, stage:i 1284.3
TCGA-G3-AAUZ-01A 48 years, male, stage:i 1282.6
TCGA-DD-AACU-01A 59 years, male, asian, stage:i 1273.7
TCGA-DD-AACK-01A 70 years, male, asian, stage:i 1271.6
TCGA-EP-A3JL-01A 76 years, male, white, stage:i 1262.8
TCGA-DD-A114-01A 42 years, male, black or african american, stage:ii 1259.7
TCGA-UB-AA0U-01A 60 years, male, white, stage:ii 1232.5
TCGA-CC-5261-01A 44 years, male, asian, stage:ii 1213.9
TCGA-DD-AAEK-01A 51 years, male, asian, stage:ii 1206.2
TCGA-RC-A7S9-01A 47 years, female, asian, stage:i 1201.0
TCGA-DD-A4NA-01A 67 years, female, white, stage:iiic 1198.2
TCGA-DD-AAEH-01A 73 years, male, asian, stage:i 1198.1
TCGA-XR-A8TF-01A 74 years, male, white, stage:i 1198.0
TCGA-EP-A26S-01A 70 years, male, white, stage:i 1194.2
TCGA-DD-AADA-01A 66 years, female, asian, stage:i 1189.8
TCGA-FV-A2QR-01A male, white, stage:i 1189.4
TCGA-DD-AADR-01A 58 years, male, asian, stage:i 1179.8
TCGA-KR-A7K0-01A 65 years, male, white, stage:i 1171.4
TCGA-DD-AAD0-01A 73 years, female, asian, stage:i 1168.4
TCGA-BC-A10Y-01A 76 years, male, white 1166.0
TCGA-K7-A5RG-01A 66 years, male, black or african american, stage:i 1165.5
TCGA-BC-A216-01A 62 years, female, white, stage:iiia 1154.4
TCGA-DD-A4NV-01A 61 years, male, white, stage:iiia 1152.2
TCGA-ZP-A9D4-01A 64 years, female, white 1138.8
TCGA-DD-A3A8-01A 75 years, male, white, stage:ii 1131.6
TCGA-UB-AA0V-01A 69 years, female, white, stage:i 1128.0
TCGA-5C-AAPD-01A 61 years, male, asian, stage:ii 1119.9
TCGA-DD-AAW1-01A 55 years, male, asian, stage:iiia 1110.6
TCGA-CC-A8HV-01A 51 years, female, asian, stage:ii 1108.6
TCGA-DD-A3A3-01A 45 years, male, asian, stage:i 1107.8
TCGA-DD-AAD1-01A 51 years, female, asian, stage:i 1100.6
TCGA-DD-A39V-01A 77 years, male, white, stage:ii 1099.9
TCGA-G3-A7M7-01A 65 years, male, white, stage:i 1095.0
TCGA-HP-A5MZ-01A 62 years, male, stage:i 1092.7
TCGA-ZP-A9CV-01A 59 years, male, white 1084.5
TCGA-DD-AAW3-01A 69 years, male, asian, stage:i 1070.9
TCGA-G3-A5SM-01A 58 years, male, white, stage:ii 1068.6
TCGA-DD-A4NB-01A 25 years, male, white, stage:i 1066.3
TCGA-DD-AACD-01A 48 years, male, asian, stage:i 1058.7
TCGA-WJ-A86L-01A 68 years, female, white, stage:i 1053.3
TCGA-CC-5263-01A 35 years, male, asian, stage:iiia 1052.9
TCGA-G3-A25Y-01A 52 years, female, asian, stage:i 1051.4
TCGA-DD-AAE0-01A 45 years, female, asian, stage:iiia 1047.9
TCGA-DD-AADB-01A 51 years, male, asian, stage:i 1044.6
TCGA-MI-A75G-01A 63 years, male, white, stage:ii 1041.7
TCGA-K7-AAU7-01A 61 years, male, white, stage:ii 1038.7
TCGA-CC-A8HS-01A 18 years, male, asian, stage:iiic 1038.0
TCGA-EP-A3RK-01A 73 years, male, white, stage:iiia 1029.7
TCGA-RC-A7SB-01A 53 years, male, asian, stage:ii 1027.9
TCGA-DD-A119-01A 40 years, male, asian, stage:iv 1027.1
TCGA-BC-A3KF-01A 66 years, female, white, stage:i 1024.2
TCGA-G3-A25U-01A 63 years, female, asian, stage:i 1023.9
TCGA-2Y-A9H3-01A 45 years, male, white, stage:ii 1020.3
TCGA-DD-AADG-01A 70 years, male, asian, stage:iiia 1015.1
TCGA-BC-A10Z-01A 62 years, female, white, stage:i 1012.0
TCGA-G3-A7M6-01A 60 years, female, white, stage:i 1006.0
TCGA-WX-AA47-01A 33 years, female, white, stage:iiia 1002.6
TCGA-DD-A4NR-01A 85 years, female, white, stage:i 996.4
TCGA-DD-A73A-01A 71 years, male, white, stage:i 995.6
TCGA-RC-A6M4-01A 74 years, female, white, stage:iiia 993.8
TCGA-DD-AACJ-01A 75 years, male, asian, stage:ii 992.1
TCGA-DD-A4NH-01A 65 years, female, white, stage:iiib 991.5
TCGA-BC-4072-01B 74 years, female, white, stage:iiia 990.2
TCGA-WX-AA46-01A 62 years, male, white, stage:ii 984.4
TCGA-2Y-A9H0-01A 49 years, male, white, stage:iiia 979.6
TCGA-ED-A97K-01A 54 years, male, asian, stage:iiia 975.6
TCGA-K7-A6G5-01A 66 years, male, white, stage:i 973.7
TCGA-BC-A8YO-01A 66 years, female, white, stage:iiic 972.0
TCGA-DD-A39Y-01A 67 years, male, asian, stage:i 968.4
TCGA-2Y-A9H5-01A 59 years, female, white, stage:i 963.4
TCGA-CC-5264-01A 71 years, male, asian, stage:iiia 954.8
TCGA-CC-A7IL-01A 61 years, male, asian, stage:iiia 942.9
TCGA-G3-A5SL-01A 70 years, male, white, stage:ii 942.5
TCGA-DD-AACC-01A 61 years, male, asian, stage:i 934.5
TCGA-DD-A11A-01A 67 years, male, black or african american, stage:i 931.3
TCGA-DD-AACW-01A 43 years, male, asian, stage:i 931.3
TCGA-DD-AAEB-01A 60 years, male, asian, stage:i 924.7
TCGA-G3-AAV3-01A 58 years, female, white, stage:ii 903.5
TCGA-UB-A7MC-01A 59 years, male, white, stage:iiia 899.8
TCGA-UB-A7MD-01A 67 years, male, black or african american, stage:i 895.5
TCGA-XR-A8TE-01A 16 years, male, white, stage:iiia 895.5
TCGA-UB-A7MF-01A 57 years, male, white, stage:iiia 895.4
TCGA-DD-A4NS-01A 62 years, female, white, stage:i 895.2
TCGA-DD-A1EC-01A 20 years, female, white, stage:i 888.4
TCGA-ZP-A9CZ-01A 72 years, male, asian 886.9
TCGA-ED-A66Y-01A 51 years, female, asian, stage:iiia 872.6
TCGA-DD-AAED-01A 51 years, male, asian, stage:i 861.2
TCGA-DD-AAW2-01A 69 years, male, asian, stage:i 857.9
TCGA-DD-A4NF-01A 72 years, male, white, stage:i 854.5
TCGA-2Y-A9GS-01A 58 years, male, white 853.0
TCGA-DD-A4NJ-01A 54 years, female, white, stage:ii 851.9
TCGA-MI-A75H-01A 77 years, male, white 846.5
TCGA-BC-A112-01A 80 years, male, white 839.5
TCGA-DD-AAVV-01A 56 years, male, asian, stage:ii 836.6
TCGA-UB-A7MB-01A 24 years, male, white, stage:ii 835.8
TCGA-EP-A12J-01A 63 years, male, black or african american, stage:i 833.2
TCGA-RC-A7SF-01A 66 years, male, asian, stage:i 832.7
TCGA-DD-AAD8-01A 73 years, female, asian, stage:i 810.4
TCGA-CC-A3MB-01A 36 years, male, asian, stage:iiia 809.3
TCGA-ED-A5KG-01A 60 years, female, asian, stage:ii 809.0
TCGA-DD-AADL-01A 58 years, male, asian, stage:i 804.7
TCGA-KR-A7K7-01A 61 years, female, white, stage:ii 800.3
TCGA-2Y-A9H4-01A 68 years, male, black or african american, stage:i 775.2
TCGA-DD-A1EJ-01A 71 years, female, white, stage:iiic 773.4
TCGA-DD-A4NG-01A 77 years, male, white, stage:iiia 768.4
TCGA-DD-AACH-01A 69 years, male, asian, stage:ii 768.2
TCGA-FV-A4ZP-01A 78 years, male, white, stage:iiia 755.8
TCGA-DD-AACG-01A 52 years, male, asian, stage:ii 740.2
TCGA-CC-A7IH-01A 58 years, male, asian, stage:iiia 735.6
TCGA-CC-A3MC-01A 54 years, male, asian, stage:iiia 733.9
TCGA-G3-AAV5-01A 67 years, male, white, stage:ii 729.4
TCGA-DD-AA3A-01A 81 years, female, white, stage:i 722.8
TCGA-G3-A3CH-01A 53 years, male, asian, stage:iiia 721.5
TCGA-G3-A3CK-01A 61 years, male, asian, stage:i 716.9
TCGA-G3-AAV1-01A 51 years, male, asian, stage:iiic 710.5
TCGA-EP-A2KB-01A 46 years, female, white, stage:i 698.7
TCGA-DD-AAVR-01A 44 years, male, asian, stage:i 693.9
TCGA-DD-AAEE-01A 55 years, male, asian, stage:i 692.9
TCGA-G3-A25X-01A 73 years, male, asian, stage:ii 677.5
TCGA-LG-A9QC-01A 48 years, male, white, stage:i 669.6
TCGA-DD-AACX-01A 66 years, male, asian, stage:ii 665.3
TCGA-CC-A7IF-01A 59 years, male, asian, stage:iiia 662.2
TCGA-DD-AACE-01A 62 years, male, asian, stage:i 654.2
TCGA-CC-A8HT-01A 74 years, male, asian, stage:iiia 650.7
TCGA-DD-AAEG-01A 59 years, female, asian, stage:i 649.4
TCGA-BC-A69H-01A 64 years, male, white, stage:ii 648.2
TCGA-DD-A73E-01A 66 years, male, white, stage:i 645.5
TCGA-G3-A25S-01A 64 years, male, white, stage:i 645.0
TCGA-DD-A3A2-01A 76 years, female, white, stage:i 644.7
TCGA-CC-5259-01A 60 years, female, asian, stage:iiic 644.4
TCGA-CC-A7IG-01A 47 years, male, asian, stage:ii 629.6
TCGA-BC-A3KG-01A 68 years, female, white, stage:ii 629.5
TCGA-CC-A5UE-01A 48 years, male, asian, stage:iiib 615.5
TCGA-2Y-A9HA-01A 70 years, male, white, stage:ii 614.5
TCGA-DD-AAEA-01A 65 years, male, asian, stage:i 605.0
TCGA-G3-AAV4-01A 83 years, female, white, stage:i 603.1
TCGA-ZS-A9CG-01A 55 years, male, white, stage:ii 586.6
TCGA-FV-A4ZQ-01A 52 years, male, white, stage:i 580.7
TCGA-CC-A3MA-01A 61 years, male, asian, stage:iiia 569.7
TCGA-CC-A1HT-01A 50 years, male, asian, stage:iiia 564.2
TCGA-DD-AACB-01A 74 years, female, asian, stage:i 563.7
TCGA-DD-A73D-01A 68 years, female, white, stage:ii 555.2
TCGA-DD-A4NQ-01A 60 years, male, white, stage:ii 550.8
TCGA-2Y-A9H2-01A 64 years, female, white, stage:i 549.1
TCGA-NI-A4U2-01A 71 years, male, white, stage:iiia 540.4
TCGA-CC-A8HU-01A 39 years, female, asian, stage:iiia 538.9
TCGA-KR-A7K8-01A 57 years, male, stage:i 538.3
TCGA-DD-AADN-01A 59 years, male, asian, stage:i 532.6
TCGA-DD-AAE3-01A 50 years, male, asian, stage:i 532.1
TCGA-DD-AAC8-01A 72 years, male, asian, stage:i 526.3
TCGA-5R-AA1D-01A 17 years, female, white, stage:iiia 525.3
TCGA-ED-A82E-01A 60 years, female, asian, stage:iiia 524.2
TCGA-ED-A66X-01A 35 years, male, asian, stage:iiia 520.7
TCGA-NI-A8LF-01A 74 years, male, white, stage:i 500.7
TCGA-DD-AADD-01A 51 years, male, asian, stage:i 498.8
TCGA-DD-A39X-01A 78 years, female, white, stage:i 490.8
TCGA-BC-A10W-01A 50 years, male, asian 489.8
TCGA-DD-A1EI-01A 46 years, male, asian, stage:i 489.5
TCGA-G3-A7M9-01A 70 years, male, white, stage:iiib 488.2
TCGA-XR-A8TD-01A 49 years, female, white, stage:iiib 486.6
TCGA-5R-AA1C-01A 57 years, male, white, stage:ii 480.3
TCGA-CC-A5UC-01A 63 years, male, asian, stage:iiia 467.9
TCGA-MI-A75C-01A 64 years, male, white, stage:i 459.8
TCGA-DD-AADU-01A 60 years, male, asian, stage:ii 444.4
TCGA-ED-A8O6-01A 50 years, female, asian, stage:iiia 440.8
TCGA-ED-A7PX-01A 48 years, female, asian, stage:ii 427.5
TCGA-DD-AACQ-01A 50 years, male, asian, stage:ii 426.7
TCGA-DD-A1EF-01A 57 years, female, white, stage:i 424.7
TCGA-DD-A39W-01A 29 years, female, white, stage:iii 417.6
TCGA-DD-AAD5-01A 54 years, male, asian, stage:i 415.2
TCGA-DD-AACL-01A 66 years, female, asian, stage:i 414.4
TCGA-DD-AAVP-01A 48 years, male, asian, stage:i 411.2
TCGA-DD-AADC-01A 53 years, male, asian, stage:i 398.8
TCGA-DD-AACA-01A 65 years, male, asian, stage:i 393.4
TCGA-CC-A7IK-01A 59 years, male, asian, stage:iiia 375.1
TCGA-RG-A7D4-01A 69 years, male, black or african american, stage:ii 374.3
TCGA-G3-AAV7-01A 38 years, male, asian, stage:ii 366.2
TCGA-DD-AACP-01A 65 years, male, asian, stage:i 362.2
TCGA-RC-A7SH-01A 42 years, male, asian, stage:ii 356.4
TCGA-FV-A3I0-01A 76 years, female, white, stage:ii 355.0
TCGA-DD-AAD6-01A 66 years, male, asian, stage:iiia 354.2
TCGA-CC-A7II-01A 55 years, male, asian, stage:iiia 352.2
TCGA-ED-A7PZ-01A 61 years, male, asian, stage:ii 324.7
TCGA-G3-AAV6-01A 53 years, female, white, stage:iiia 319.1
TCGA-BC-A10Q-01A 72 years, female, white 302.7
TCGA-2Y-A9GY-01A 64 years, female, white, stage:ii 302.5
TCGA-MR-A8JO-01A 34 years, male, white, stage:i 301.8
TCGA-WQ-A9G7-01A female, white 299.4
TCGA-5C-A9VG-01A 58 years, male, white, stage:ii 297.6
TCGA-GJ-A3OU-01A 59 years, male, white, stage:i 281.9
TCGA-DD-AAE6-01A 59 years, female, asian, stage:i 271.2
TCGA-CC-5260-01A 61 years, female, asian, stage:iiic 267.5
TCGA-DD-AACZ-01A 63 years, female, asian, stage:i 265.1
TCGA-DD-A1EL-01A 23 years, male, black or african american, stage:ii 261.6
TCGA-DD-A116-01A 68 years, male, asian, stage:iiia 251.3
TCGA-CC-A7IE-01A 57 years, male, asian, stage:iiia 242.6
TCGA-CC-A5UD-01A 45 years, male, asian, stage:iiia 238.4
TCGA-G3-A25T-01A 45 years, female, white, stage:iiia 230.5
TCGA-RC-A6M6-01A 75 years, male, white, stage:ii 160.3
TCGA-DD-AAE9-01A 69 years, male, asian, stage:i 68.5
TCGA-CC-A7IJ-01A 56 years, male, asian, stage:ii 35.1
TCGA-CC-A3M9-01A 45 years, male, asian, stage:iiia 8.5
TCGA-DD-A3A6-01A 72 years, female, white, stage:ii 3.0
TCGA-CC-5258-01A 48 years, male, asian, stage:ii 2.9
Show all

LIVER CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody HPA003563

Antibody HPA020432

Antibody CAB004209

 Antibody staining
  High
  Medium
  Low
  Not detected
    
 Intensity
  Strong
  Moderate
  Weak
  Negative
    
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
    
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
    

Click images for details
































































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