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TISSUE ATLAS VAGINA

GENE/PROTEIN

Dictionary

Vagina

VAGINA - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

GTEx:21.3RPKM
FANTOM5:45.2Tags Per Million

VAGINA - Annotated protein expression

Pending normal tissue analysis


VAGINA - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Pending HPA RNA-seq analysis


VAGINA - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

21.3

GTEx sample id

Sample description

RPKM

Vagina
RPKM: 21.3
Samples: 96

Max RPKM: 59.5
Min RPKM: 8.6
Std RPKM: 8.4
Median RPKM: 20.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 59.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 48.6
GTEX-12WSB-2426-SM-5EGJC 60-69 years, female 39.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 38.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 37.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 36.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 35.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 35.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 34.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 32.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 29.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 29.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 28.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 28.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 27.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 27.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 26.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 26.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 26.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 26.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 26.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 25.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 25.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 25.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 24.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 24.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 24.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 24.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 24.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 24.1
GTEX-Q734-1426-SM-48TZQ 40-49 years, female 23.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 23.5
GTEX-XUJ4-1626-SM-4BONV 60-69 years, female 23.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 23.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 22.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 22.5
GTEX-UPIC-1426-SM-4IHLQ 20-29 years, female 22.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 22.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 21.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 21.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 21.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 21.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 21.3
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 21.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 21.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 20.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 20.6
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 20.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 20.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 19.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 19.7
GTEX-ZYWO-2026-SM-5GIDA 40-49 years, female 19.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 19.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 19.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 19.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 19.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 19.2
GTEX-QVJO-2526-SM-4R1KB 60-69 years, female 19.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 18.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 18.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 17.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 17.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 17.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 17.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 16.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 16.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 16.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 15.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 15.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 15.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 15.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 15.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 15.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 15.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 14.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 14.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 14.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 14.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 13.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 13.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 13.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 13.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 13.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 13.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 13.3
GTEX-NL3G-2526-SM-4SOIE 60-69 years, female 13.2
GTEX-PWOO-2026-SM-48TDE 40-49 years, female 13.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 12.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 12.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 10.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 9.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 9.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 9.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 8.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 8.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 8.6
Show all

VAGINA - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

45.2

FANTOM5 sample id

Sample description

Tags Per Million

Vagina
Tags Per Million: 45.2
FF:10204-103F6 68 years, female 45.2

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