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TISSUE ATLAS STOMACH

GENE/PROTEIN

Dictionary

Stomach, lower
Stomach, upper

Tissue proteome

Stomach

STOMACH - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:1.3TPM
GTEx:0.7RPKM

STOMACH - Annotated protein expression

Pending normal tissue analysis


STOMACH - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

1.3

overview Female, age 33 Sample 1
TPM: 0.7
Cell types%
Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35
N/A Male, age 82 Sample 2
TPM: 1.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30
overview Male, age 71 Sample 3
TPM: 2.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45
overview Female, age 66 Sample 4
TPM: 0.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

0.7

GTEx sample id

Sample description

RPKM

Stomach
RPKM: 0.7
Samples: 193

Max RPKM: 3.6
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.5
GTEX-XV7Q-1326-SM-4BRWM 40-49 years, female 3.6
GTEX-145MO-2226-SM-5Q5BN 60-69 years, male 3.1
GTEX-UPK5-2126-SM-4JBJK 40-49 years, male 3.1
GTEX-14BMV-2226-SM-5RQHX 50-59 years, male 2.9
GTEX-13PVQ-2126-SM-5L3FW 50-59 years, male 2.6
GTEX-Y9LG-1026-SM-5IFJN 30-39 years, male 2.5
GTEX-WHPG-0426-SM-4M1XW 50-59 years, male 2.1
GTEX-ZYY3-1726-SM-5EGH3 60-69 years, female 2.1
GTEX-12WSD-2326-SM-59HKQ 60-69 years, female 1.9
GTEX-139YR-1926-SM-5LZXM 50-59 years, male 1.9
GTEX-T8EM-1226-SM-4DM5J 40-49 years, male 1.9
GTEX-S341-0626-SM-4AD5T 40-49 years, female 1.8
GTEX-VJYA-1026-SM-4KL21 60-69 years, male 1.7
GTEX-ZVP2-1626-SM-5GU5D 50-59 years, male 1.6
GTEX-11NUK-2426-SM-5BC4U 50-59 years, male 1.5
GTEX-13U4I-2526-SM-5SI8Z 40-49 years, female 1.5
GTEX-POMQ-0826-SM-3P61H 20-29 years, female 1.5
GTEX-11DXX-1326-SM-5GIDZ 60-69 years, female 1.4
GTEX-P78B-1826-SM-3P5YX 40-49 years, female 1.4
GTEX-Q734-1026-SM-48U16 40-49 years, female 1.4
GTEX-V1D1-1726-SM-4JBHB 50-59 years, male 1.4
GTEX-ZF2S-1426-SM-57WET 50-59 years, female 1.4
GTEX-ZVT3-2126-SM-59HL2 60-69 years, female 1.4
GTEX-1399S-1626-SM-5P9GI 30-39 years, female 1.3
GTEX-WFG8-1326-SM-4LVN3 20-29 years, male 1.3
GTEX-QMRM-1126-SM-447BN 50-59 years, male 1.2
GTEX-U3ZN-2026-SM-4DXUC 30-39 years, female 1.2
GTEX-Y3I4-1626-SM-4TT7W 50-59 years, male 1.2
GTEX-Y3IK-1426-SM-4YCES 50-59 years, female 1.2
GTEX-13OW6-2526-SM-5IJEC 50-59 years, male 1.1
GTEX-13RTK-0226-SM-5RQHR 20-29 years, male 1.1
GTEX-PW2O-1226-SM-48TCH 20-29 years, male 1.1
GTEX-Q2AH-1126-SM-48TZM 40-49 years, male 1.1
GTEX-S3XE-1026-SM-4AD4O 50-59 years, male 1.1
GTEX-T6MO-0726-SM-4DM58 40-49 years, female 1.1
GTEX-UJMC-1226-SM-4IHLI 50-59 years, male 1.1
GTEX-Y8E4-1526-SM-4WWDI 40-49 years, male 1.1
GTEX-ZYVF-2726-SM-5GID4 50-59 years, female 1.1
GTEX-12WSJ-0926-SM-5P9JD 40-49 years, female 1.0
GTEX-132QS-1826-SM-5IFFN 60-69 years, male 1.0
GTEX-1399R-1126-SM-5IFIO 30-39 years, male 1.0
GTEX-13FTW-1726-SM-5KM2B 40-49 years, male 1.0
GTEX-OHPK-1526-SM-3MJGM 50-59 years, female 1.0
GTEX-QLQW-0726-SM-447AA 30-39 years, male 1.0
GTEX-WRHK-0626-SM-4MVOE 20-29 years, female 1.0
GTEX-WZTO-2126-SM-4PQYW 40-49 years, male 1.0
GTEX-X15G-1126-SM-4PQZG 50-59 years, female 1.0
GTEX-XBED-1226-SM-4AT5V 60-69 years, male 1.0
GTEX-YJ8A-1526-SM-5P9FT 20-29 years, male 1.0
GTEX-ZPU1-1626-SM-4WWB2 40-49 years, male 1.0
GTEX-ZY6K-0726-SM-5A5L8 50-59 years, male 1.0
GTEX-11NSD-1426-SM-5HL67 20-29 years, male 0.9
GTEX-XUJ4-1226-SM-4BOPD 60-69 years, female 0.9
GTEX-OOBJ-1526-SM-3NB1Q 60-69 years, male 0.8
GTEX-QCQG-0526-SM-48U2A 50-59 years, female 0.8
GTEX-QDVJ-1426-SM-48U1Y 50-59 years, male 0.8
GTEX-QLQ7-0826-SM-447B3 60-69 years, male 0.8
GTEX-SNOS-0826-SM-4DM5N 40-49 years, male 0.8
GTEX-T5JC-1926-SM-4DM6Q 20-29 years, male 0.8
GTEX-111CU-0926-SM-5EGIK 50-59 years, male 0.7
GTEX-111YS-1126-SM-5GZYQ 60-69 years, male 0.7
GTEX-11EI6-2426-SM-5PNVS 60-69 years, male 0.7
GTEX-132AR-2426-SM-5IFFD 50-59 years, female 0.7
GTEX-133LE-1326-SM-5IFGO 20-29 years, female 0.7
GTEX-13D11-2126-SM-5IFH2 50-59 years, female 0.7
GTEX-13O3Q-2126-SM-5KM4C 50-59 years, male 0.7
GTEX-13S7M-1826-SM-5RQK6 60-69 years, female 0.7
GTEX-144GM-1726-SM-5O9AS 20-29 years, male 0.7
GTEX-144GN-1226-SM-5O991 50-59 years, male 0.7
GTEX-QV31-0626-SM-447C5 30-39 years, male 0.7
GTEX-WHWD-1426-SM-4OORU 50-59 years, male 0.7
GTEX-ZV7C-1626-SM-5NQ7E 50-59 years, male 0.7
GTEX-ZYFG-1326-SM-5GICJ 60-69 years, female 0.7
GTEX-1122O-1926-SM-5EGIQ 60-69 years, female 0.6
GTEX-117YX-1026-SM-5H11V 50-59 years, male 0.6
GTEX-11GSP-2126-SM-5HL5E 60-69 years, female 0.6
GTEX-146FH-2126-SM-5SI9U 50-59 years, female 0.6
GTEX-P4PP-1526-SM-3P61M 30-39 years, female 0.6
GTEX-PWCY-0926-SM-48TD7 20-29 years, female 0.6
GTEX-PWOO-1226-SM-48TCO 40-49 years, female 0.6
GTEX-SIU7-1426-SM-4BRWT 50-59 years, male 0.6
GTEX-SNMC-0626-SM-4DM6H 20-29 years, male 0.6
GTEX-Y8LW-0826-SM-4WWDO 50-59 years, female 0.6
GTEX-ZLFU-1326-SM-4WWET 40-49 years, male 0.6
GTEX-11EM3-1026-SM-5A5KL 20-29 years, female 0.5
GTEX-11WQK-2626-SM-5EQ4K 50-59 years, male 0.5
GTEX-12BJ1-1726-SM-5HL9B 60-69 years, male 0.5
GTEX-13113-0726-SM-5LZUF 60-69 years, female 0.5
GTEX-131XE-2226-SM-5PNYX 50-59 years, male 0.5
GTEX-139D8-2326-SM-5IFGE 30-39 years, female 0.5
GTEX-13CF3-1926-SM-5K7WF 60-69 years, female 0.5
GTEX-145ME-1026-SM-5O9B4 40-49 years, female 0.5
GTEX-PWN1-1526-SM-48TDA 40-49 years, female 0.5
GTEX-Q2AI-0826-SM-48TZO 40-49 years, male 0.5
GTEX-RM2N-0826-SM-48FD3 50-59 years, male 0.5
GTEX-S7SF-0626-SM-4AD4V 20-29 years, female 0.5
GTEX-S95S-0826-SM-4B64N 60-69 years, male 0.5
GTEX-YEC4-1426-SM-5IFHS 40-49 years, male 0.5
GTEX-ZA64-0826-SM-5HL9U 20-29 years, male 0.5
GTEX-ZLV1-0826-SM-4WWEQ 60-69 years, female 0.5
GTEX-ZVZP-1726-SM-5GZWY 50-59 years, male 0.5
GTEX-ZXES-1426-SM-5NQ8S 30-39 years, female 0.5
GTEX-ZZ64-0426-SM-5E43F 20-29 years, male 0.5
GTEX-11I78-1726-SM-5A5M3 50-59 years, female 0.4
GTEX-131XF-1226-SM-5HL8V 60-69 years, male 0.4
GTEX-131XG-1226-SM-5EGH9 50-59 years, female 0.4
GTEX-13O21-0926-SM-5IFGT 50-59 years, male 0.4
GTEX-13QBU-1126-SM-5LU44 40-49 years, female 0.4
GTEX-13QJ3-2726-SM-5SI6L 50-59 years, male 0.4
GTEX-145MN-1326-SM-5NQ9S 30-39 years, male 0.4
GTEX-146FR-2026-SM-5NQAI 60-69 years, female 0.4
GTEX-14BMU-1126-SM-5RQJ8 20-29 years, female 0.4
GTEX-QDVN-1226-SM-48TZ5 50-59 years, male 0.4
GTEX-QV44-1226-SM-4R1KE 50-59 years, male 0.4
GTEX-R55C-1026-SM-48FCM 40-49 years, male 0.4
GTEX-S4UY-1626-SM-4AD55 40-49 years, female 0.4
GTEX-S4Z8-1226-SM-4AD6W 60-69 years, male 0.4
GTEX-UJHI-1026-SM-4IHJP 50-59 years, female 0.4
GTEX-WEY5-1226-SM-4LMIQ 40-49 years, female 0.4
GTEX-XBEW-1826-SM-4RTWX 40-49 years, male 0.4
GTEX-XUZC-0726-SM-4BOPH 30-39 years, female 0.4
GTEX-XXEK-0826-SM-4BRWG 50-59 years, male 0.4
GTEX-11VI4-0326-SM-5EQ6L 40-49 years, female 0.3
GTEX-12696-1726-SM-5EQLH 60-69 years, male 0.3
GTEX-13111-1226-SM-5GCNC 50-59 years, male 0.3
GTEX-1339X-1426-SM-5K7YO 40-49 years, male 0.3
GTEX-13FTX-0726-SM-5N9BI 20-29 years, female 0.3
GTEX-13N1W-2026-SM-5K7YU 70-79 years, male 0.3
GTEX-P4QT-1526-SM-3NMCT 50-59 years, female 0.3
GTEX-PLZ6-0826-SM-3P61K 30-39 years, male 0.3
GTEX-PX3G-1526-SM-48U11 20-29 years, female 0.3
GTEX-QXCU-1926-SM-48FE4 50-59 years, male 0.3
GTEX-R53T-1226-SM-48FCT 50-59 years, female 0.3
GTEX-R55D-1526-SM-48FEJ 50-59 years, male 0.3
GTEX-RTLS-2626-SM-46MUJ 60-69 years, female 0.3
GTEX-S4Q7-0726-SM-4AD5F 20-29 years, male 0.3
GTEX-T5JW-0926-SM-4DM5K 20-29 years, female 0.3
GTEX-WFG7-1326-SM-4LMK1 20-29 years, male 0.3
GTEX-XAJ8-0326-SM-47JYI 40-49 years, male 0.3
GTEX-XQ8I-2026-SM-4BOOL 50-59 years, male 0.3
GTEX-YFCO-0826-SM-5LUAG 40-49 years, male 0.3
GTEX-ZP4G-1226-SM-4WWCJ 20-29 years, female 0.3
GTEX-ZT9W-1526-SM-4YCDE 50-59 years, male 0.3
GTEX-11EQ9-1226-SM-5987E 30-39 years, male 0.2
GTEX-11TT1-0726-SM-5GU5A 20-29 years, male 0.2
GTEX-12WSG-2026-SM-5FQUU 50-59 years, female 0.2
GTEX-12WSK-1426-SM-5CVNN 40-49 years, female 0.2
GTEX-O5YW-1526-SM-3MJGL 50-59 years, male 0.2
GTEX-R55G-1126-SM-48FDG 40-49 years, female 0.2
GTEX-RU1J-0526-SM-46MUT 20-29 years, female 0.2
GTEX-S4P3-0726-SM-4AD57 50-59 years, female 0.2
GTEX-SUCS-0926-SM-4DM4Z 70-79 years, male 0.2
GTEX-TKQ2-0926-SM-4DXU5 50-59 years, male 0.2
GTEX-U4B1-1026-SM-4DXT1 40-49 years, male 0.2
GTEX-U8T8-1226-SM-4E3IH 60-69 years, male 0.2
GTEX-UPIC-1826-SM-4IHKC 20-29 years, female 0.2
GTEX-WFON-1126-SM-4LVMA 40-49 years, male 0.2
GTEX-Y114-1226-SM-4TT88 50-59 years, female 0.2
GTEX-Y5LM-1326-SM-5RQIS 40-49 years, female 0.2
GTEX-YEC3-1426-101806-SM-5PNXX 50-59 years, male 0.2
GTEX-ZAB4-1526-SM-5CVN7 40-49 years, male 0.2
GTEX-ZPIC-2026-SM-57WG3 40-49 years, female 0.2
GTEX-ZQUD-0826-SM-57WDQ 30-39 years, male 0.2
GTEX-ZTX8-0426-SM-59HLG 20-29 years, male 0.2
GTEX-ZZPU-1426-SM-5GZZ6 50-59 years, female 0.2
GTEX-117YW-2226-SM-5N9DB 50-59 years, male 0.1
GTEX-11P7K-1726-SM-5GU6F 30-39 years, male 0.1
GTEX-11P82-0726-SM-5PNYL 20-29 years, male 0.1
GTEX-1211K-1426-SM-5FQTF 60-69 years, female 0.1
GTEX-12C56-0526-SM-5FQST 20-29 years, male 0.1
GTEX-1399U-1626-SM-5P9J3 50-59 years, female 0.1
GTEX-13FH7-1026-SM-5IJGF 50-59 years, female 0.1
GTEX-13O61-1126-SM-5L3FI 60-69 years, male 0.1
GTEX-13OVI-2426-SM-5KM4J 60-69 years, female 0.1
GTEX-13X6H-1626-SM-5Q5CT 50-59 years, female 0.1
GTEX-145LT-1426-SM-5O9B3 40-49 years, male 0.1
GTEX-OIZH-1526-SM-3NB1J 50-59 years, male 0.1
GTEX-OXRK-1626-SM-3NB17 50-59 years, female 0.1
GTEX-P4PQ-1526-SM-3NMCK 60-69 years, male 0.1
GTEX-RWS6-0926-SM-47JXE 60-69 years, female 0.1
GTEX-TKQ1-0526-SM-4DXTG 30-39 years, male 0.1
GTEX-TMMY-1626-SM-4DXTY 40-49 years, female 0.1
GTEX-V955-1326-SM-4JBHR 60-69 years, male 0.1
GTEX-WFJO-1126-SM-4LVLZ 30-39 years, male 0.1
GTEX-WH7G-1526-SM-4LVMX 40-49 years, male 0.1
GTEX-XPVG-1526-SM-4B66C 50-59 years, male 0.1
GTEX-Y5V6-1326-SM-4VDTF 60-69 years, male 0.1
GTEX-ZDYS-1926-SM-5HL59 50-59 years, male 0.1
GTEX-ZV6S-0926-SM-57WGB 40-49 years, female 0.1
GTEX-ZVT2-1626-SM-51MRC 50-59 years, female 0.1
GTEX-NFK9-1526-SM-3LK7B 40-49 years, male 0.0
GTEX-W5WG-1726-SM-4LMI5 50-59 years, female 0.0
GTEX-ZE7O-3026-SM-51MS4 50-59 years, female 0.0
Show all

STOMACH - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

No Fantom CAGE analysis found for this gene / tissue

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