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TISSUE ATLAS PRIMARY DATA PANCREAS

GENE/PROTEIN

Antibody validation


Dictionary

Pancreas

Tissue proteome

Pancreas

PANCREAS - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:5.8TPM
GTEx:14.1RPKM
FANTOM5:36.6Tags Per Million

PANCREAS - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Exocrine glandular cells:Not detected
Islets of Langerhans:Not detected
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA001383

 

Antibody CAB000043

 

Antibody CAB020416

 

Antibody CAB062555

 

Exocrine glandular cells

Medium   Not detected   Not detected   Not detected  

Islets of Langerhans

Low   Not detected   Not detected   Not detected  
       
       
       

PANCREAS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

5.8

overview Female, age 59 Sample 1
TPM: 6.4
Cell types%
Exocrine glandular cells: 75
Islets of Langerhans: 10
Ductal cells: 5
Other cell types: 10
overview Male, age 60 Sample 2
TPM: 5.2
Cell types%
Exocrine glandular cells: 90
Islets of Langerhans: 5
Ductal cells: 5

PANCREAS - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

14.1

GTEx sample id

Sample description

RPKM

Pancreas
RPKM: 14.1
Samples: 171

Max RPKM: 33.4
Min RPKM: 3.9
Std RPKM: 4.8
Median RPKM: 13.0
GTEX-NPJ8-2126-SM-3MJGK 40-49 years, male 33.4
GTEX-144FL-1526-SM-5Q5CA 50-59 years, male 31.1
GTEX-WFON-0626-SM-4LVLX 40-49 years, male 30.4
GTEX-QDVN-0926-SM-2I5GL 50-59 years, male 27.4
GTEX-13N11-0226-SM-5KM3C 50-59 years, female 26.9
GTEX-1497J-0426-SM-5Q5CO 60-69 years, male 26.6
GTEX-ZC5H-0826-SM-5N9FH 40-49 years, female 26.2
GTEX-Y9LG-0726-SM-4VDS3 30-39 years, male 25.3
GTEX-WI4N-1826-SM-4OOSF 40-49 years, female 24.7
GTEX-ZF3C-2026-SM-4WWB5 50-59 years, female 24.0
GTEX-O5YT-1026-SM-3MJGF 20-29 years, male 22.3
GTEX-P4QS-1026-SM-3NMCW 60-69 years, male 22.3
GTEX-PWOO-0626-SM-48TZH 40-49 years, female 21.3
GTEX-WFJO-0626-SM-4LVMC 30-39 years, male 21.1
GTEX-QDVJ-1226-SM-48U1V 50-59 years, male 21.0
GTEX-XYKS-1226-SM-4BRVI 60-69 years, female 20.7
GTEX-ZTPG-1026-SM-5DUWP 20-29 years, female 20.6
GTEX-132QS-0926-SM-5P9GB 60-69 years, male 20.3
GTEX-WFG8-0326-SM-4LVN4 20-29 years, male 19.8
GTEX-139YR-1526-SM-5IFJ1 50-59 years, male 19.5
GTEX-Q2AI-0426-SM-48U13 40-49 years, male 19.4
GTEX-XBED-0226-SM-47JY8 60-69 years, male 19.4
GTEX-ZZPU-0726-SM-5N9C8 50-59 years, female 19.2
GTEX-13YAN-2126-SM-5Q5C4 60-69 years, male 18.9
GTEX-V955-0326-SM-4JBGV 60-69 years, male 18.4
GTEX-X5EB-0526-SM-46MVP 40-49 years, male 18.4
GTEX-11TT1-0326-SM-5LUAY 20-29 years, male 18.2
GTEX-XV7Q-0926-SM-4BRVQ 40-49 years, female 18.1
GTEX-S32W-0826-SM-4AD5Z 50-59 years, female 18.0
GTEX-OOBK-1026-SM-48TC2 40-49 years, male 17.9
GTEX-V1D1-0726-SM-4JBH7 50-59 years, male 17.9
GTEX-13FH7-1426-SM-5IFIC 50-59 years, female 17.7
GTEX-R55G-0326-SM-48FDM 40-49 years, female 17.7
GTEX-13VXT-1226-SM-5LU3M 20-29 years, female 17.6
GTEX-PW2O-0826-SM-48TC5 20-29 years, male 17.5
GTEX-VJYA-0826-SM-4KL1M 60-69 years, male 17.3
GTEX-131XE-1926-SM-5IFER 50-59 years, male 17.2
GTEX-144GN-0826-SM-5LU5G 50-59 years, male 17.2
GTEX-Q2AH-0926-SM-48TZK 40-49 years, male 17.2
GTEX-SE5C-0326-SM-4BRWX 40-49 years, female 17.0
GTEX-13PL7-2226-SM-5L3IC 60-69 years, female 16.8
GTEX-Y5LM-0526-SM-4V6G3 40-49 years, female 16.8
GTEX-11XUK-0626-SM-5N9ES 40-49 years, female 16.5
GTEX-WFG7-0426-SM-4LMK5 20-29 years, male 16.5
GTEX-YB5E-0526-SM-4VDSD 40-49 years, male 16.5
GTEX-ZPIC-0926-SM-4WWFK 40-49 years, female 16.4
GTEX-14E6E-1426-SM-5RQI2 30-39 years, male 16.2
GTEX-WHWD-0726-SM-4OORX 50-59 years, male 16.1
GTEX-XPVG-0326-SM-4B653 50-59 years, male 16.0
GTEX-UPIC-0726-SM-3GADW 20-29 years, female 15.8
GTEX-Y3I4-0826-SM-4TT2A 50-59 years, male 15.8
GTEX-1211K-1126-SM-5EGGB 60-69 years, female 15.7
GTEX-SIU7-0926-SM-4BRX1 50-59 years, male 15.7
GTEX-ZYW4-2126-SM-59HJ9 60-69 years, male 15.7
GTEX-13X6H-0626-SM-5LU53 50-59 years, female 15.6
GTEX-S95S-0726-SM-4B64H 60-69 years, male 15.6
GTEX-OHPM-1026-SM-3LK74 50-59 years, male 15.5
GTEX-P4PQ-1026-SM-3NMCN 60-69 years, male 15.3
GTEX-Y8LW-1026-SM-5IFJY 50-59 years, female 15.1
GTEX-14AS3-0326-SM-5Q5DB 40-49 years, female 14.9
GTEX-ZAB5-0826-SM-5P9FU 50-59 years, male 14.8
GTEX-NFK9-1626-SM-3LK5J 40-49 years, male 14.4
GTEX-SUCS-1426-SM-4DM5W 70-79 years, male 14.4
GTEX-13CF3-1026-SM-5LZWY 60-69 years, female 14.3
GTEX-X4LF-0326-SM-4QAS9 50-59 years, male 14.2
GTEX-13W3W-1026-SM-5IFG4 60-69 years, female 14.0
GTEX-11LCK-0226-SM-5A5M6 30-39 years, male 13.9
GTEX-14ICL-1126-SM-5S2RE 30-39 years, male 13.9
GTEX-PSDG-1526-SM-48TCY 50-59 years, male 13.9
GTEX-XMK1-0326-SM-4B652 40-49 years, male 13.9
GTEX-11EQ9-1026-SM-5H134 30-39 years, male 13.8
GTEX-T8EM-0826-SM-4DM76 40-49 years, male 13.8
GTEX-QEL4-1326-SM-447AD 50-59 years, male 13.7
GTEX-132AR-1826-SM-5EGHR 50-59 years, female 13.4
GTEX-OHPL-1026-SM-3MJGI 60-69 years, female 13.3
GTEX-Y3IK-0426-SM-4WWE2 50-59 years, female 13.3
GTEX-1399S-0326-SM-5IFFS 30-39 years, female 13.2
GTEX-ZVZP-0626-SM-59HL5 50-59 years, male 13.2
GTEX-13D11-2226-SM-5IFEO 50-59 years, female 13.1
GTEX-13FTX-1226-SM-5IFGN 20-29 years, female 13.1
GTEX-ZVP2-0726-SM-59HKY 50-59 years, male 13.1
GTEX-117YX-0226-SM-5EGH6 50-59 years, male 13.0
GTEX-12WSL-0426-SM-5GCNX 50-59 years, male 13.0
GTEX-13OVI-0526-SM-5IFFQ 60-69 years, female 13.0
GTEX-SNOS-0926-SM-4DM7A 40-49 years, male 13.0
GTEX-XUW1-1726-SM-4BOOZ 50-59 years, female 13.0
GTEX-ZP4G-0426-SM-4YCER 20-29 years, female 13.0
GTEX-12WSN-0826-SM-5GCOF 40-49 years, male 12.9
GTEX-RWS6-1126-SM-47JXC 60-69 years, female 12.9
GTEX-U4B1-0726-SM-4DXUA 40-49 years, male 12.8
GTEX-X15G-0726-SM-4PQZ5 50-59 years, female 12.7
GTEX-1122O-0726-SM-5GIEV 60-69 years, female 12.6
GTEX-ZG7Y-0326-SM-4WWEY 50-59 years, male 12.6
GTEX-ZYFG-0826-SM-5BC5T 60-69 years, female 12.6
GTEX-111CU-0526-SM-5EGHK 50-59 years, male 12.5
GTEX-XXEK-1726-SM-4BRVB 50-59 years, male 12.5
GTEX-QLQ7-0626-SM-4R1JT 60-69 years, male 12.3
GTEX-WQUQ-2126-SM-4OOSO 60-69 years, male 12.3
GTEX-QMRM-0326-SM-4R1K5 50-59 years, male 12.1
GTEX-RM2N-0326-SM-48FD8 50-59 years, male 12.1
GTEX-11I78-0626-SM-5A5LZ 50-59 years, female 12.0
GTEX-PX3G-1026-SM-48TZW 20-29 years, female 12.0
GTEX-UJMC-1126-SM-3GADP 50-59 years, male 12.0
GTEX-UJHI-0626-SM-3DB8T 50-59 years, female 11.8
GTEX-QCQG-0426-SM-48U29 50-59 years, female 11.7
GTEX-X3Y1-0726-SM-3P5YU 40-49 years, male 11.7
GTEX-XGQ4-0226-SM-4GIDS 50-59 years, male 11.7
GTEX-YFCO-1026-SM-5LU9S 40-49 years, male 11.7
GTEX-ZLWG-0326-SM-4WWC7 50-59 years, female 11.7
GTEX-131XF-1426-SM-5BC68 60-69 years, male 11.6
GTEX-1399R-0426-SM-5IJE3 30-39 years, male 11.6
GTEX-TMMY-1326-SM-4DXU9 40-49 years, female 11.5
GTEX-11P7K-0526-SM-5BC5I 30-39 years, male 11.4
GTEX-XQ8I-1926-SM-4BOOK 50-59 years, male 11.4
GTEX-ZV7C-0726-SM-59HKH 50-59 years, male 11.4
GTEX-131XG-1426-SM-5GCMO 50-59 years, female 11.3
GTEX-145ME-0326-SM-5S2QO 40-49 years, female 11.3
GTEX-PLZ6-0726-SM-3P619 30-39 years, male 11.3
GTEX-QV31-0226-SM-447BO 30-39 years, male 11.3
GTEX-R53T-0426-SM-48FEM 50-59 years, female 11.3
GTEX-S4P3-0626-SM-4AD59 50-59 years, female 11.3
GTEX-ZT9W-0926-SM-57WFS 50-59 years, male 11.3
GTEX-1128S-0826-SM-5GZZI 60-69 years, female 11.2
GTEX-XBEW-1626-SM-4SOJP 40-49 years, male 11.2
GTEX-YB5K-1826-SM-5IFJC 40-49 years, female 11.1
GTEX-1339X-1026-SM-5IFH5 40-49 years, male 11.0
GTEX-13FTW-0526-SM-5IFIP 40-49 years, male 11.0
GTEX-QV44-0426-SM-4R1KF 50-59 years, male 11.0
GTEX-13O61-2126-SM-5IJEO 60-69 years, male 10.9
GTEX-145MN-1426-SM-5SI9H 30-39 years, male 10.8
GTEX-TKQ2-0426-SM-4DXUO 50-59 years, male 10.8
GTEX-1399U-0926-SM-5IFHA 50-59 years, female 10.7
GTEX-QLQW-0326-SM-447A8 30-39 years, male 10.7
GTEX-WH7G-0826-SM-4LVMR 40-49 years, male 10.7
GTEX-ZYWO-1326-SM-5SI8X 40-49 years, female 10.7
GTEX-R55D-1426-SM-48FEN 50-59 years, male 10.6
GTEX-S33H-1226-SM-4AD69 30-39 years, male 10.6
GTEX-ZAB4-1726-SM-5HL8C 40-49 years, male 10.6
GTEX-11DXX-0926-SM-5H112 60-69 years, female 10.4
GTEX-11VI4-0426-SM-5EGHZ 40-49 years, female 10.4
GTEX-ZLFU-0726-SM-57WF6 40-49 years, male 10.4
GTEX-W5WG-0826-SM-4RGNE 50-59 years, female 10.3
GTEX-T5JW-0226-SM-4DM7I 20-29 years, female 10.2
GTEX-145MO-2126-SM-5Q5CZ 60-69 years, male 10.1
GTEX-YEC3-0626-SM-5IFHZ 50-59 years, male 10.1
GTEX-ZYY3-0826-SM-5E44R 60-69 years, female 10.1
GTEX-YF7O-1326-SM-4W1ZR 50-59 years, male 9.7
GTEX-13U4I-1526-SM-5IFFF 40-49 years, female 9.6
GTEX-WRHK-0226-SM-4MVOH 20-29 years, female 9.6
GTEX-Y5V5-1026-SM-5LUAH 60-69 years, female 9.6
GTEX-146FR-0126-SM-5Q5F3 60-69 years, female 9.5
GTEX-S3XE-0526-SM-4AD4G 50-59 years, male 9.5
GTEX-Y114-0826-SM-4TT77 50-59 years, female 9.5
GTEX-111YS-1226-SM-5EGGJ 60-69 years, male 9.4
GTEX-P4PP-1026-SM-3NM9O 30-39 years, female 9.4
GTEX-12WSK-0226-SM-5BC62 40-49 years, female 9.3
GTEX-13O1R-1826-SM-5KM3B 60-69 years, male 9.3
GTEX-WYVS-0926-SM-4SOJV 40-49 years, female 9.3
GTEX-12BJ1-1126-SM-5EGGG 60-69 years, male 9.0
GTEX-YEC4-1326-SM-5IFHG 40-49 years, male 8.9
GTEX-Q734-0426-SM-48TZX 40-49 years, female 8.8
GTEX-12WSG-1026-SM-5EGII 50-59 years, female 8.7
GTEX-ZVT2-2026-SM-5NQ8Q 50-59 years, female 8.6
GTEX-Y8E4-1326-SM-5IFIY 40-49 years, male 8.2
GTEX-146FQ-1526-SM-5Q5CX 30-39 years, male 8.1
GTEX-ZPU1-0226-SM-4WWC9 40-49 years, male 8.0
GTEX-TML8-0526-SM-32QOQ 40-49 years, female 7.5
GTEX-OOBJ-1026-SM-3NB2L 60-69 years, male 6.8
GTEX-11NSD-0526-SM-5A5LT 20-29 years, male 5.8
GTEX-11ONC-0526-SM-5BC57 60-69 years, male 4.8
GTEX-13FLV-0626-SM-5IFEY 50-59 years, male 3.9
Show all

PANCREAS - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

36.6

FANTOM5 sample id

Sample description

Tags Per Million

Pancreas
Tags Per Million: 36.6
FF:10049-101G4 52 years, male 36.6

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