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ABCA6
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA064878

 

Antibody HPA067180

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA064878   HPA067180  

Host species

Rabbit   Rabbit  

Clonalityi

The antibodies are designated mAB for monoclonal and pAb for polyclonal.

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene matchi

Genes, excluding the target gene, to which the antigen sequence of the antibody is >80% identical.

   

Released in versioni

The release of the Human Protein Atlas in which the antibody was first published.

16   16  

Referencesi

References to publications in which the antibody has been used.

   

Proper citation

Atlas Antibodies Cat#HPA064878, RRID:AB_2685380   Atlas Antibodies Cat#HPA067180, RRID:AB_2685797  

VALIDATION SUMMARYi

Read more

 
 

Antibody HPA064878

 

Antibody HPA067180

 
Immunocytochemistryi
Immunocytochemistry is used to validate the antibody staining and for assessing and validating the protein expression pattern in selected human cell lines.

Read more


Validated
 

Validated
 
Western bloti
A Western blot analysis is performed on a panel of human tissues and cell lines to evaluate antibody specificity. For antibodies with uncertain result a revalidation using an over-expression lysate is performed.

Read more

Uncertain   Uncertain  
Protein arrayi
A protein microarray containing 384 different antigens including the antibody target is used for analysis of antibody specificity.

Read more

Supported   Approved  

IMMUNOCYTOCHEMISTRYi

Immunocytochemistry is used to validate the antibody staining and for assessing and validating the protein expression pattern in selected human cell lines.

Read more

 
 

Antibody HPA064878

 

Antibody HPA067180

 

Formal validation: Independenti

Independent antibodies: the antibody specificity has been validated by comparing two or more antibodies that recognize different epitopes on the target protein.

Read more

Validated

Antibody staining overlaps with antibody HPA067180.
 
Validated

Antibody staining overlaps with antibody HPA064878.
 
 

Standard validationi

For each antibody, the observed staining in the different cell lines is assigned a validation score based on concordance with available experimental gene/protein characterization data in the UniProtKB/Swiss-Prot database. The validation scores for up to three cell lines are merged into one of the main categories; Supported, Approved, or Uncertain to represent the overall antibody staining in all analyzed cell lines.

Read more

Supported   Supported  

   

Figure description

Immunofluorescent staining of human cell line RT4 shows localization to nucleoplasm.   Immunofluorescent staining of human cell line RT4 shows localization to nucleoplasm.  

Antibody dilution

1:137   1:58  

Literature conformityi

The immunostaining patterns is compared for consistency with available experimental gene/protein characterization data in the UniProtKB/Swiss-Prot database and other experimental evidence for location described in scientific literature.

Read more

The subcellular location is supported by literature.   The subcellular location is supported by literature.  

WESTERN BLOTi

A Western blot analysis is performed on a panel of human tissues and cell lines to evaluate antibody specificity. For antibodies with unreliable result a revalidation using an over-expression lysate is performed.

Read more

 
 

Antibody HPA064878

 

Antibody HPA067180

 

Standard validationi

Western Blot is used for quality control of the polyclonal antibodies generated in the project. After purification, the antibodies are used to detect bands in a setup of lysate and different tissues. The result is then scored Supported, Approved, or Uncertain.

Read more

Uncertain

Analysis performed using a standard panel of samples.
Single band larger than predicted size in kDa (+20%) but partly supported by experimental and/or bioinformatic data.
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
   

Target mass (kDa)

184.3   184.3  

Antibody dilution

1:460   1:190  

PROTEIN ARRAYi

A protein microarray containing 384 different antigens including the antibody target is used for analysis of antibody specificity.

Read more

 
 

Antibody HPA064878

 

Antibody HPA067180

 

Standard validationi

A protein array containing 384 different antigens including the antibody target is used to analyse antibody specificity. Depending on the array interaction profile the antibody is scored as Supported, Approved, or Uncertain.

Read more

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:5500   1:2350  

ANTIGEN INFORMATION

 
 

Antibody HPA064878

 

Antibody HPA067180

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

51   61  

Antigen sequence

LYFDKILPYGDERHYSPLFFLNSSSCFQHQRTNAKVIEKEIDAEHPSDDY
F
 
LEGQSTIEQDFEQVEMIRDSESLNEMELAHSSFSEMQTAVSDMGLWRMQV
FAMARLRFLKL
 

Matching transcripts

ABCA6-001 - ENSP00000284425 [100%]
  ABCA6-001 - ENSP00000284425 [100%]
 

Other gene matchi

Genes, excluding the target gene, to which the antigen sequence of the antibody is >80% identical.

   
ANTIGEN VIEW
ABCA6-001
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.