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ABCA6

COLON - Expression summary

RNA expressioni
HPA:3.5TPM
GTEx:4.6RPKM
FANTOM5:27.2Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seqi

Average TPM

3.5
overview Male, age 54 Sample 1
TPM: 3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi

Average RPKM

4.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.4
Samples: 149

Max RPKM: 19.8
Min RPKM: 0.6
Std RPKM: 3.3
Median RPKM: 4.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 19.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 17.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 15.2
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 15.1
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 14.8
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 12.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 12.7
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 12.0
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 11.8
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 11.8
Show all
Colon - Transverse
RPKM: 3.9
Samples: 196

Max RPKM: 19.4
Min RPKM: 0.1
Std RPKM: 3.3
Median RPKM: 2.9
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 19.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 16.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 16.2
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 15.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 15.4
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 15.3
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 11.9
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 11.4
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 10.8
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 10.3
Show all

COLON - FANTOM5 CAGEi

Average Tags Per Million

27.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 27.2
FF:10014-101C5 62,83,84 years, mixed 27.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.