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TISSUE ATLAS PRIMARY DATA PANCREAS

GENE/PROTEIN

Antibody validation


Dictionary

Pancreas

Tissue proteome

Pancreas

PANCREAS - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:3.7TPM
GTEx:13.4RPKM
FANTOM5:69.6Tags Per Million

PANCREAS - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Exocrine glandular cells:Medium
Islets of Langerhans:Medium
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA022032

 

Exocrine glandular cells

Medium  

Islets of Langerhans

Medium  
 
 
 

PANCREAS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

3.7

overview Female, age 59 Sample 1
TPM: 3.5
Cell types%
Exocrine glandular cells: 75
Islets of Langerhans: 10
Ductal cells: 5
Other cell types: 10
overview Male, age 60 Sample 2
TPM: 3.9
Cell types%
Exocrine glandular cells: 90
Islets of Langerhans: 5
Ductal cells: 5

PANCREAS - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

13.4

GTEx sample id

Sample description

RPKM

Pancreas
RPKM: 13.4
Samples: 171

Max RPKM: 43.7
Min RPKM: 4.0
Std RPKM: 5.3
Median RPKM: 12.6
GTEX-13YAN-2126-SM-5Q5C4 60-69 years, male 43.7
GTEX-ZYW4-2126-SM-59HJ9 60-69 years, male 39.4
GTEX-Q2AH-0926-SM-48TZK 40-49 years, male 33.2
GTEX-145ME-0326-SM-5S2QO 40-49 years, female 25.4
GTEX-131XE-1926-SM-5IFER 50-59 years, male 24.8
GTEX-13W3W-1026-SM-5IFG4 60-69 years, female 23.2
GTEX-P4PQ-1026-SM-3NMCN 60-69 years, male 22.5
GTEX-Y8LW-1026-SM-5IFJY 50-59 years, female 22.4
GTEX-13X6H-0626-SM-5LU53 50-59 years, female 21.8
GTEX-NPJ8-2126-SM-3MJGK 40-49 years, male 21.6
GTEX-ZV7C-0726-SM-59HKH 50-59 years, male 21.4
GTEX-X5EB-0526-SM-46MVP 40-49 years, male 21.3
GTEX-13FH7-1426-SM-5IFIC 50-59 years, female 21.1
GTEX-P4QS-1026-SM-3NMCW 60-69 years, male 21.0
GTEX-XYKS-1226-SM-4BRVI 60-69 years, female 20.3
GTEX-UJMC-1126-SM-3GADP 50-59 years, male 19.6
GTEX-OOBK-1026-SM-48TC2 40-49 years, male 19.5
GTEX-O5YT-1026-SM-3MJGF 20-29 years, male 19.2
GTEX-S95S-0726-SM-4B64H 60-69 years, male 19.1
GTEX-12WSL-0426-SM-5GCNX 50-59 years, male 18.8
GTEX-SIU7-0926-SM-4BRX1 50-59 years, male 18.3
GTEX-ZC5H-0826-SM-5N9FH 40-49 years, female 18.3
GTEX-UPIC-0726-SM-3GADW 20-29 years, female 18.2
GTEX-X3Y1-0726-SM-3P5YU 40-49 years, male 17.9
GTEX-Y114-0826-SM-4TT77 50-59 years, female 17.8
GTEX-ZLFU-0726-SM-57WF6 40-49 years, male 17.8
GTEX-VJYA-0826-SM-4KL1M 60-69 years, male 17.6
GTEX-13OVI-0526-SM-5IFFQ 60-69 years, female 17.5
GTEX-UJHI-0626-SM-3DB8T 50-59 years, female 17.2
GTEX-ZZPU-0726-SM-5N9C8 50-59 years, female 17.1
GTEX-WHWD-0726-SM-4OORX 50-59 years, male 16.7
GTEX-WI4N-1826-SM-4OOSF 40-49 years, female 16.7
GTEX-12WSN-0826-SM-5GCOF 40-49 years, male 16.3
GTEX-V1D1-0726-SM-4JBH7 50-59 years, male 16.3
GTEX-1122O-0726-SM-5GIEV 60-69 years, female 16.2
GTEX-11XUK-0626-SM-5N9ES 40-49 years, female 16.1
GTEX-QCQG-0426-SM-48U29 50-59 years, female 16.0
GTEX-S32W-0826-SM-4AD5Z 50-59 years, female 16.0
GTEX-11P7K-0526-SM-5BC5I 30-39 years, male 15.9
GTEX-13N11-0226-SM-5KM3C 50-59 years, female 15.8
GTEX-13O61-2126-SM-5IJEO 60-69 years, male 15.7
GTEX-QLQ7-0626-SM-4R1JT 60-69 years, male 15.7
GTEX-RWS6-1126-SM-47JXC 60-69 years, female 15.7
GTEX-V955-0326-SM-4JBGV 60-69 years, male 15.7
GTEX-QEL4-1326-SM-447AD 50-59 years, male 15.6
GTEX-T8EM-0826-SM-4DM76 40-49 years, male 15.6
GTEX-TML8-0526-SM-32QOQ 40-49 years, female 15.6
GTEX-144GN-0826-SM-5LU5G 50-59 years, male 15.4
GTEX-YB5K-1826-SM-5IFJC 40-49 years, female 15.4
GTEX-11LCK-0226-SM-5A5M6 30-39 years, male 15.1
GTEX-1399U-0926-SM-5IFHA 50-59 years, female 15.1
GTEX-WFJO-0626-SM-4LVMC 30-39 years, male 15.1
GTEX-NFK9-1626-SM-3LK5J 40-49 years, male 15.0
GTEX-13VXT-1226-SM-5LU3M 20-29 years, female 14.9
GTEX-Y3I4-0826-SM-4TT2A 50-59 years, male 14.8
GTEX-145MN-1426-SM-5SI9H 30-39 years, male 14.5
GTEX-ZF3C-2026-SM-4WWB5 50-59 years, female 14.5
GTEX-132QS-0926-SM-5P9GB 60-69 years, male 14.3
GTEX-1399S-0326-SM-5IFFS 30-39 years, female 14.2
GTEX-144FL-1526-SM-5Q5CA 50-59 years, male 14.2
GTEX-Y5LM-0526-SM-4V6G3 40-49 years, female 14.2
GTEX-13O1R-1826-SM-5KM3B 60-69 years, male 14.1
GTEX-U4B1-0726-SM-4DXUA 40-49 years, male 14.1
GTEX-11EQ9-1026-SM-5H134 30-39 years, male 14.0
GTEX-QDVN-0926-SM-2I5GL 50-59 years, male 14.0
GTEX-145MO-2126-SM-5Q5CZ 60-69 years, male 13.8
GTEX-131XF-1426-SM-5BC68 60-69 years, male 13.6
GTEX-11TT1-0326-SM-5LUAY 20-29 years, male 13.5
GTEX-ZYFG-0826-SM-5BC5T 60-69 years, female 13.4
GTEX-1128S-0826-SM-5GZZI 60-69 years, female 13.3
GTEX-Q2AI-0426-SM-48U13 40-49 years, male 13.3
GTEX-ZP4G-0426-SM-4YCER 20-29 years, female 13.3
GTEX-PSDG-1526-SM-48TCY 50-59 years, male 13.2
GTEX-13D11-2226-SM-5IFEO 50-59 years, female 13.1
GTEX-146FR-0126-SM-5Q5F3 60-69 years, female 13.0
GTEX-14E6E-1426-SM-5RQI2 30-39 years, male 13.0
GTEX-QV31-0226-SM-447BO 30-39 years, male 13.0
GTEX-SUCS-1426-SM-4DM5W 70-79 years, male 13.0
GTEX-XXEK-1726-SM-4BRVB 50-59 years, male 13.0
GTEX-1497J-0426-SM-5Q5CO 60-69 years, male 12.9
GTEX-WFG7-0426-SM-4LMK5 20-29 years, male 12.9
GTEX-ZVZP-0626-SM-59HL5 50-59 years, male 12.9
GTEX-S4P3-0626-SM-4AD59 50-59 years, female 12.8
GTEX-XGQ4-0226-SM-4GIDS 50-59 years, male 12.7
GTEX-ZTPG-1026-SM-5DUWP 20-29 years, female 12.7
GTEX-1211K-1126-SM-5EGGB 60-69 years, female 12.6
GTEX-WQUQ-2126-SM-4OOSO 60-69 years, male 12.6
GTEX-XPVG-0326-SM-4B653 50-59 years, male 12.4
GTEX-1339X-1026-SM-5IFH5 40-49 years, male 12.3
GTEX-RM2N-0326-SM-48FD8 50-59 years, male 12.2
GTEX-YEC4-1326-SM-5IFHG 40-49 years, male 12.2
GTEX-13CF3-1026-SM-5LZWY 60-69 years, female 12.0
GTEX-14AS3-0326-SM-5Q5DB 40-49 years, female 12.0
GTEX-OHPL-1026-SM-3MJGI 60-69 years, female 12.0
GTEX-ZT9W-0926-SM-57WFS 50-59 years, male 12.0
GTEX-111CU-0526-SM-5EGHK 50-59 years, male 11.9
GTEX-SE5C-0326-SM-4BRWX 40-49 years, female 11.9
GTEX-TKQ2-0426-SM-4DXUO 50-59 years, male 11.9
GTEX-Y3IK-0426-SM-4WWE2 50-59 years, female 11.9
GTEX-ZYWO-1326-SM-5SI8X 40-49 years, female 11.9
GTEX-QLQW-0326-SM-447A8 30-39 years, male 11.7
GTEX-12WSK-0226-SM-5BC62 40-49 years, female 11.6
GTEX-ZG7Y-0326-SM-4WWEY 50-59 years, male 11.5
GTEX-ZVT2-2026-SM-5NQ8Q 50-59 years, female 11.5
GTEX-12BJ1-1126-SM-5EGGG 60-69 years, male 11.4
GTEX-WFG8-0326-SM-4LVN4 20-29 years, male 11.4
GTEX-S3XE-0526-SM-4AD4G 50-59 years, male 11.3
GTEX-Y9LG-0726-SM-4VDS3 30-39 years, male 11.3
GTEX-R55G-0326-SM-48FDM 40-49 years, female 11.2
GTEX-SNOS-0926-SM-4DM7A 40-49 years, male 11.2
GTEX-PLZ6-0726-SM-3P619 30-39 years, male 11.1
GTEX-PWOO-0626-SM-48TZH 40-49 years, female 11.0
GTEX-X4LF-0326-SM-4QAS9 50-59 years, male 11.0
GTEX-XUW1-1726-SM-4BOOZ 50-59 years, female 11.0
GTEX-11DXX-0926-SM-5H112 60-69 years, female 10.9
GTEX-TMMY-1326-SM-4DXU9 40-49 years, female 10.9
GTEX-YEC3-0626-SM-5IFHZ 50-59 years, male 10.9
GTEX-13FTW-0526-SM-5IFIP 40-49 years, male 10.8
GTEX-WRHK-0226-SM-4MVOH 20-29 years, female 10.8
GTEX-117YX-0226-SM-5EGH6 50-59 years, male 10.7
GTEX-XMK1-0326-SM-4B652 40-49 years, male 10.7
GTEX-11VI4-0426-SM-5EGHZ 40-49 years, female 10.6
GTEX-W5WG-0826-SM-4RGNE 50-59 years, female 10.6
GTEX-ZAB4-1726-SM-5HL8C 40-49 years, male 10.6
GTEX-ZVP2-0726-SM-59HKY 50-59 years, male 10.5
GTEX-R55D-1426-SM-48FEN 50-59 years, male 10.4
GTEX-S33H-1226-SM-4AD69 30-39 years, male 10.3
GTEX-Y5V5-1026-SM-5LUAH 60-69 years, female 10.3
GTEX-YB5E-0526-SM-4VDSD 40-49 years, male 10.3
GTEX-13FTX-1226-SM-5IFGN 20-29 years, female 10.2
GTEX-P4PP-1026-SM-3NM9O 30-39 years, female 10.2
GTEX-QDVJ-1226-SM-48U1V 50-59 years, male 10.1
GTEX-111YS-1226-SM-5EGGJ 60-69 years, male 10.0
GTEX-XBEW-1626-SM-4SOJP 40-49 years, male 10.0
GTEX-ZAB5-0826-SM-5P9FU 50-59 years, male 10.0
GTEX-QMRM-0326-SM-4R1K5 50-59 years, male 9.9
GTEX-11ONC-0526-SM-5BC57 60-69 years, male 9.8
GTEX-YFCO-1026-SM-5LU9S 40-49 years, male 9.8
GTEX-YF7O-1326-SM-4W1ZR 50-59 years, male 9.6
GTEX-PW2O-0826-SM-48TC5 20-29 years, male 9.5
GTEX-WFON-0626-SM-4LVLX 40-49 years, male 9.3
GTEX-T5JW-0226-SM-4DM7I 20-29 years, female 9.2
GTEX-WYVS-0926-SM-4SOJV 40-49 years, female 9.2
GTEX-XBED-0226-SM-47JY8 60-69 years, male 9.2
GTEX-14ICL-1126-SM-5S2RE 30-39 years, male 9.0
GTEX-13PL7-2226-SM-5L3IC 60-69 years, female 8.9
GTEX-X15G-0726-SM-4PQZ5 50-59 years, female 8.9
GTEX-11I78-0626-SM-5A5LZ 50-59 years, female 8.7
GTEX-ZPIC-0926-SM-4WWFK 40-49 years, female 8.7
GTEX-WH7G-0826-SM-4LVMR 40-49 years, male 8.5
GTEX-ZYY3-0826-SM-5E44R 60-69 years, female 8.5
GTEX-13U4I-1526-SM-5IFFF 40-49 years, female 8.2
GTEX-139YR-1526-SM-5IFJ1 50-59 years, male 7.9
GTEX-OOBJ-1026-SM-3NB2L 60-69 years, male 7.9
GTEX-ZLWG-0326-SM-4WWC7 50-59 years, female 7.9
GTEX-1399R-0426-SM-5IJE3 30-39 years, male 7.8
GTEX-OHPM-1026-SM-3LK74 50-59 years, male 7.8
GTEX-PX3G-1026-SM-48TZW 20-29 years, female 7.7
GTEX-XV7Q-0926-SM-4BRVQ 40-49 years, female 7.7
GTEX-Y8E4-1326-SM-5IFIY 40-49 years, male 7.5
GTEX-QV44-0426-SM-4R1KF 50-59 years, male 7.4
GTEX-146FQ-1526-SM-5Q5CX 30-39 years, male 7.1
GTEX-131XG-1426-SM-5GCMO 50-59 years, female 6.8
GTEX-XQ8I-1926-SM-4BOOK 50-59 years, male 6.8
GTEX-11NSD-0526-SM-5A5LT 20-29 years, male 6.3
GTEX-ZPU1-0226-SM-4WWC9 40-49 years, male 6.2
GTEX-132AR-1826-SM-5EGHR 50-59 years, female 5.9
GTEX-13FLV-0626-SM-5IFEY 50-59 years, male 5.9
GTEX-R53T-0426-SM-48FEM 50-59 years, female 5.5
GTEX-12WSG-1026-SM-5EGII 50-59 years, female 5.1
GTEX-Q734-0426-SM-48TZX 40-49 years, female 4.0
Show all

PANCREAS - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

69.6

FANTOM5 sample id

Sample description

Tags Per Million

Pancreas
Tags Per Million: 69.6
FF:10049-101G4 52 years, male 69.6

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