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Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival, using best separation (to the left) and median separation (to the right). Patients were divided based on level of expression into one of the two groups "low" or "high". Below each Kaplan-Meier plot, corresponding expression cutoff, 5-year survival for patients with high expression, 5-year survival for patients with low expression and log-rank P value are displayed. For melanoma and glioma, 3-year survival is shown. The survival analysis is described in Assays & Annotation.
The tabs at the top of the survival analysis section can be used to switch between the different cancer subtypes.
Best separation
Median separation
Expression cutoffi
5-year survival for patients with higher expression than the expression cutoff.
67.9 FPKM
71.6 FPKM
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
4%
5%
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
9%
8%
Log-rank P valuei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.
Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
Stage:
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
74.4
Number of samples
153
Samples
Sample
Description
FPKM
TCGA-32-2616-01A
48 years, female, white
161.3
TCGA-76-4928-01B
85 years, female, white
150.9
TCGA-06-0184-01A
63 years, male, white
147.3
TCGA-14-1034-01A
60 years, female
145.5
TCGA-14-0789-01A
54 years, male, white
142.0
TCGA-06-0190-01A
62 years, male, white
139.7
TCGA-12-0619-01A
60 years, male, white
135.5
TCGA-06-5412-01A
78 years, female, white
123.5
TCGA-28-2513-01A
69 years, female, white
123.3
TCGA-06-5859-01A
63 years, male, white
121.5
TCGA-16-1045-01B
49 years, female, white
116.8
TCGA-08-0386-01A
74 years, male, white
115.9
TCGA-14-0781-01B
49 years, male, black or african american
115.3
TCGA-27-1832-01A
59 years, female, white
113.5
TCGA-28-2509-01A
77 years, female, white
112.1
TCGA-06-5408-01A
54 years, female, white
108.4
TCGA-19-2629-01A
60 years, male, white
107.0
TCGA-06-0878-01A
74 years, male, white
106.7
TCGA-19-2625-01A
76 years, female, white
106.5
TCGA-06-2567-01A
65 years, male, white
106.0
TCGA-06-5858-01A
45 years, female, white
102.5
TCGA-76-4932-01A
50 years, female, white
102.1
TCGA-06-5856-01A
58 years, male, white
100.5
TCGA-06-0644-01A
71 years, male, black or african american
100.3
TCGA-06-2562-01A
81 years, male, white
100.2
TCGA-28-5208-01A
52 years, male, white
99.7
TCGA-41-4097-01A
63 years, female, white
98.5
TCGA-32-1980-01A
72 years, male, white
97.5
TCGA-06-2561-01A
53 years, female, white
96.8
TCGA-26-5132-01A
74 years, male, white
96.7
TCGA-06-0882-01A
30 years, male, white
96.6
TCGA-32-4213-01A
47 years, female, white
94.7
TCGA-06-0158-01A
73 years, male, white
94.7
TCGA-28-2499-01A
59 years, male, white
94.6
TCGA-06-0130-01A
54 years, male, white
94.0
TCGA-06-5416-01A
23 years, female, white
92.7
TCGA-76-4925-01A
76 years, male, white
92.5
TCGA-27-2524-01A
56 years, male, white
92.3
TCGA-06-0211-01B
47 years, male, white
92.0
TCGA-28-2514-01A
45 years, male, asian
90.5
TCGA-19-2619-01A
55 years, female, black or african american
89.0
TCGA-32-2634-01A
82 years, male, white
89.0
TCGA-28-5216-01A
52 years, male, white
87.2
TCGA-06-0747-01A
53 years, male, white
86.9
TCGA-06-5410-01A
72 years, female, white
86.3
TCGA-06-0168-01A
59 years, female, white
86.2
TCGA-41-2572-01A
67 years, male, white
86.1
TCGA-06-5414-01A
61 years, male, white
85.6
TCGA-27-1837-01A
36 years, male, white
85.4
TCGA-28-5209-01A
66 years, female, white
85.1
TCGA-76-4927-01A
58 years, male, white
83.9
TCGA-06-0141-01A
62 years, male, white
82.7
TCGA-19-5960-01A
56 years, male, white
82.3
TCGA-27-2519-01A
48 years, male, white
80.5
TCGA-06-5418-01A
75 years, female, white
80.2
TCGA-76-4929-01A
76 years, female, white
79.8
TCGA-02-0055-01A
62 years, female, white
79.4
TCGA-27-2523-01A
63 years, male, white
79.4
TCGA-26-5133-01A
59 years, male, white
79.3
TCGA-26-5139-01A
65 years, female, white
79.1
TCGA-02-2486-01A
64 years, male, white
78.5
TCGA-19-4065-01A
36 years, male, white
77.9
TCGA-06-0210-01A
72 years, female, white
77.2
TCGA-06-0646-01A
61 years, male, white
76.7
TCGA-19-2620-01A
70 years, male, white
76.0
TCGA-14-1823-01A
58 years, female, white
75.3
TCGA-06-0645-01A
56 years, female, white
75.2
TCGA-32-5222-01A
66 years, male, white
74.1
TCGA-41-3915-01A
48 years, male, white
74.0
TCGA-28-5207-01A
71 years, male, white
73.8
TCGA-28-5215-01A
62 years, female, white
72.9
TCGA-06-0125-01A
63 years, female, white
72.6
TCGA-27-2528-01A
62 years, male, white
72.5
TCGA-27-1830-01A
57 years, male, white
72.4
TCGA-27-2526-01A
79 years, female, white
72.4
TCGA-32-2638-01A
67 years, male, white
72.1
TCGA-28-1747-01C
44 years, male, white
71.6
TCGA-32-2632-01A
80 years, male, white
71.5
TCGA-06-2564-01A
50 years, male, white
70.9
TCGA-28-5204-01A
72 years, male, white
69.7
TCGA-14-0787-01A
69 years, male, asian
69.6
TCGA-16-0846-01A
85 years, male, white
69.3
TCGA-02-0047-01A
78 years, male, white
69.2
TCGA-06-0750-01A
43 years, male, white
69.1
TCGA-06-0649-01B
73 years, female, black or african american
68.9
TCGA-12-0618-01A
49 years, male, white
68.3
TCGA-12-5295-01A
60 years, female, white
68.1
TCGA-15-0742-01A
65 years, male, white
68.0
TCGA-06-0187-01A
69 years, male, white
67.8
TCGA-32-2615-01A
62 years, male, white
66.8
TCGA-32-1982-01A
76 years, female, white
66.7
TCGA-15-1444-01A
21 years, male, white
66.7
TCGA-27-1834-01A
56 years, male, white
66.5
TCGA-76-4931-01A
70 years, female, white
66.5
TCGA-06-2565-01A
59 years, male, asian
65.2
TCGA-06-2563-01A
72 years, female, white
65.1
TCGA-02-2485-01A
53 years, male, black or african american
64.6
TCGA-19-1787-01B
49 years, male, white
64.5
TCGA-12-3653-01A
34 years, female, white
64.5
TCGA-32-1970-01A
59 years, male, white
64.5
TCGA-28-1753-01A
53 years, male, white
62.8
TCGA-14-2554-01A
52 years, female, white
61.7
TCGA-06-0132-01A
49 years, male, white
59.8
TCGA-26-5134-01A
74 years, male, white
59.4
TCGA-06-0157-01A
63 years, female, white
58.7
TCGA-26-5136-01B
78 years, female, white
58.5
TCGA-14-0817-01A
69 years, female, white
57.9
TCGA-12-0616-01A
36 years, female, white
56.9
TCGA-06-5411-01A
51 years, male, white
56.3
TCGA-14-0871-01A
75 years, female, white
55.9
TCGA-12-3652-01A
60 years, male, white
54.9
TCGA-27-1831-01A
66 years, male, white
53.3
TCGA-28-5213-01A
72 years, male, white
53.1
TCGA-41-5651-01A
59 years, female, black or african american
52.4
TCGA-12-5299-01A
56 years, female, white
52.3
TCGA-06-5417-01A
45 years, female, white
51.4
TCGA-06-0139-01A
40 years, male, white
50.9
TCGA-06-2557-01A
76 years, male, black or african american
50.9
TCGA-27-2521-01A
34 years, male, white
49.9
TCGA-41-2571-01A
89 years, male, white
49.6
TCGA-76-4926-01B
68 years, male, white
48.7
TCGA-26-1442-01A
43 years, male, white
48.4
TCGA-06-1804-01A
81 years, female, white
47.4
TCGA-28-5218-01A
63 years, male, white
47.0
TCGA-06-5413-01A
67 years, male, white
46.7
TCGA-26-5135-01A
72 years, female, white
45.9
TCGA-06-2569-01A
24 years, female, black or african american
45.8
TCGA-06-0749-01A
50 years, male, black or african american
45.0
TCGA-06-2559-01A
83 years, male, white
44.7
TCGA-06-0174-01A
54 years, male, white
44.7
TCGA-14-0790-01B
64 years, female, white
44.2
TCGA-06-0744-01A
67 years, male, white
44.2
TCGA-12-1597-01B
62 years, female, white
44.2
TCGA-06-0219-01A
67 years, male, white
43.0
TCGA-06-0686-01A
53 years, male, white
42.8
TCGA-06-0745-01A
59 years, male, white
42.7
TCGA-06-2558-01A
75 years, female, white
41.8
TCGA-19-2624-01A
51 years, male, white
41.7
TCGA-19-1390-01A
63 years, female, white
41.7
TCGA-12-3650-01A
46 years, male, white
41.1
TCGA-06-0238-01A
46 years, male, white
41.1
TCGA-02-2483-01A
43 years, male, asian
41.1
TCGA-14-1825-01A
70 years, male, white
41.1
TCGA-06-0156-01A
57 years, male, white
40.6
TCGA-06-2570-01A
21 years, female, white
40.3
TCGA-06-0743-01A
69 years, male, white
39.6
TCGA-06-0129-01A
30 years, male, asian
38.5
TCGA-12-0821-01A
62 years, male, white
37.8
TCGA-28-5220-01A
67 years, male, white
36.3
TCGA-06-0138-01A
43 years, male, white
33.8
TCGA-14-1829-01A
57 years, male, black or african american
29.3
TCGA-06-0178-01A
39 years, male, white
26.4
TCGA-27-1835-01A
53 years, female, white
25.1
Show all
GLIOMA - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.