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AFF1
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TISSUE ATLAS SPLEEN

GENE/PROTEIN

Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:27.2TPM
GTEx:11.4RPKM
FANTOM5:98.6Tags Per Million

SPLEEN - Annotated protein expression

Pending normal tissue analysis


SPLEEN - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

27.2

overview Female, age 60 Sample 1
TPM: 27.1
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17 Sample 2
TPM: 20.9
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20 Sample 3
TPM: 32.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19 Sample 4
TPM: 26.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65 Sample 5
TPM: 28.8
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

11.4

GTEx sample id

Sample description

RPKM

Spleen
RPKM: 11.4
Samples: 104

Max RPKM: 19.7
Min RPKM: 6.6
Std RPKM: 2.4
Median RPKM: 11.2
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 19.7
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 18.4
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 17.6
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 17.2
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 16.4
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 16.1
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 15.9
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 15.0
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 15.0
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 14.7
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 14.7
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 14.5
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 14.5
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 13.9
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 13.9
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 13.5
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 13.5
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 13.3
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 13.3
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 13.2
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 13.1
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 13.1
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 13.0
GTEX-R55G-0226-SM-48FEI 40-49 years, female 12.9
GTEX-WHWD-0126-SM-4OORS 50-59 years, male 12.9
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 12.8
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 12.7
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 12.7
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 12.6
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 12.5
GTEX-QCQG-0226-SM-48U28 50-59 years, female 12.5
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 12.4
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 12.4
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 12.3
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 12.3
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 12.2
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 12.1
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 12.0
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 12.0
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 11.8
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 11.8
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 11.7
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 11.7
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 11.7
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 11.7
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 11.7
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 11.6
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 11.5
GTEX-13111-0126-SM-5EGHO 50-59 years, male 11.4
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 11.3
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 11.3
GTEX-ZYWO-0226-SM-5GZX3 40-49 years, female 11.3
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 11.2
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 11.2
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 11.1
GTEX-X585-1826-SM-4QAS3 50-59 years, male 11.1
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 11.1
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 10.9
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 10.9
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 10.9
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 10.8
GTEX-QMRM-0226-SM-4R1K7 50-59 years, male 10.7
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 10.7
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 10.4
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 10.4
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 10.4
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 10.4
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 10.3
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 10.3
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 10.3
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 10.3
GTEX-144GN-2126-SM-5O99D 50-59 years, male 10.2
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 10.2
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 10.1
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 10.1
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 10.1
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 10.1
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 10.0
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 9.8
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 9.8
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 9.8
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 9.6
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 9.5
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 9.5
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 9.4
GTEX-Q734-0226-SM-48U1A 40-49 years, female 9.4
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 9.4
GTEX-XUJ4-0226-SM-4BOP8 60-69 years, female 9.4
GTEX-QLQW-0126-SM-447BK 30-39 years, male 9.3
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 9.1
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 8.9
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 8.6
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 8.5
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 8.5
GTEX-QV44-0126-SM-4R1KH 50-59 years, male 8.0
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 7.8
GTEX-QV31-0126-SM-447BP 30-39 years, male 7.7
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 7.6
GTEX-PX3G-0926-SM-48U12 20-29 years, female 7.6
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 7.4
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 7.4
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 7.3
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 7.3
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 6.6
Show all

SPLEEN - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

98.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 98.6
FF:10025-101D7 39,50,70 years, male 98.6

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