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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 211.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 123.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 239.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 579.6
Min RPKM: 71.4
Std RPKM: 88.0
Median RPKM: 217.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
579.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
533.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
473.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
465.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
462.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
461.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
452.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
434.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
424.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
418.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
399.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
388.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
370.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
363.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
363.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
360.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
355.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
354.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
351.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
350.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
350.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
349.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
348.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
346.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
341.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
339.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
336.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
331.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
329.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
328.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
328.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
327.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
325.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
323.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
323.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
322.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
321.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
320.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
317.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
304.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
302.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
298.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
295.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
294.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
293.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
292.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
285.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
275.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
274.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
274.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
271.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
271.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
270.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
269.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
268.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
267.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
267.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
266.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
265.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
262.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
262.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
261.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
260.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
260.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
258.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
257.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
255.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
255.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
254.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
253.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
252.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
250.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
249.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
248.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
247.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
244.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
243.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
242.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
240.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
240.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
239.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
239.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
238.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
238.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
237.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
237.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
237.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
237.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
234.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
233.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
233.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
232.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
232.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
231.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
231.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
230.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
229.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
228.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
227.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
225.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
223.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
222.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
222.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
222.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
219.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
218.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
218.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
216.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
212.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
211.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
211.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
211.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
207.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
207.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
206.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
204.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
204.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
203.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
202.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
202.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
201.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
201.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
200.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
200.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
200.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
199.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
199.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
197.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
197.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
197.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
196.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
195.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
195.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
195.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
194.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
193.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
193.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
192.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
191.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
191.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
190.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
190.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
190.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
187.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
187.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
187.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
186.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
184.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
183.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
182.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
180.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
179.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
178.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
177.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
176.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
176.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
175.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
174.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
171.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
167.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
167.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
165.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
165.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
164.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
164.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
162.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
161.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
160.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
160.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
160.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
159.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
159.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
158.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
156.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
156.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
155.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
155.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
154.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
152.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
150.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
150.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
148.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
148.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
148.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
147.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
144.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
142.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
141.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
140.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
138.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
136.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
135.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
133.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
128.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
128.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
126.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
125.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
122.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
120.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
120.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
119.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
113.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
111.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
107.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
105.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
104.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
101.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
98.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
96.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
93.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
86.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
81.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
76.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
71.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.