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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 28.2
Min RPKM: 1.1
Std RPKM: 5.2
Median RPKM: 6.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
28.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
24.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
22.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
21.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
18.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
18.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
17.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
16.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
16.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
15.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
14.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
13.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
13.6
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
12.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
12.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
12.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
12.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
11.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
11.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
11.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
11.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
11.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
10.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
10.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
9.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
9.3
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
9.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
9.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
9.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
9.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
9.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
8.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
8.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
8.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
8.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
8.1
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
7.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
7.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
7.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
7.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
7.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
7.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
7.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
6.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
6.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
6.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
6.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
6.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
6.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
6.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
6.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
6.1
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
5.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
5.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
5.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
5.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
5.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
5.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
5.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
5.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
5.3
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
5.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
5.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
5.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
5.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
5.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
4.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
4.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
4.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
4.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
4.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
4.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
4.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
3.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
3.8
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
3.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
3.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
3.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
3.6
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
3.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
3.4
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
3.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
2.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
2.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
2.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
2.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
2.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
2.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
2.4
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
2.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
2.1
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
2.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
1.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
1.1
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
