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FAM3C

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:45.7TPM
GTEx:16.8RPKM
FANTOM5:88.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA043376

  

Antibody HPA050548

  

Endothelial cells

 Low   Not detected  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 High   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

45.7
overview Male, age 54 Sample 1
TPM: 78.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 78.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 31.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 34.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 55.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 33.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 37.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 44.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 37.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 41.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 53.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 39
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 28.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.2
Samples: 149

Max RPKM: 34.8
Min RPKM: 8.3
Std RPKM: 5.0
Median RPKM: 17.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 34.8
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 30.1
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 29.0
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 28.4
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 27.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 27.3
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 27.0
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 26.9
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 26.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 26.4
Show all
Colon - Transverse
RPKM: 15.7
Samples: 196

Max RPKM: 33.1
Min RPKM: 7.3
Std RPKM: 4.6
Median RPKM: 14.7
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 33.1
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 32.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 32.3
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 30.7
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 30.6
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 30.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 28.5
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 27.4
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 26.1
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 25.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

88.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 88.0
FF:10014-101C5 62,83,84 years, mixed 88.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.