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ABCB8
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TISSUE ATLAS PRIMARY DATA PANCREAS

GENE/PROTEIN

Antibody validation


Dictionary

Pancreas

Tissue proteome

Pancreas

PANCREAS - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:1.5TPM
GTEx:3.0RPKM
FANTOM5:15.0Tags Per Million

PANCREAS - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Exocrine glandular cells:Medium
Islets of Langerhans:Medium
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA045187

 

Exocrine glandular cells

Medium  

Islets of Langerhans

Medium  
 
 
 

PANCREAS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

1.5

overview Female, age 59 Sample 1
TPM: 1.6
Cell types%
Exocrine glandular cells: 75
Islets of Langerhans: 10
Ductal cells: 5
Other cell types: 10
overview Male, age 60 Sample 2
TPM: 1.3
Cell types%
Exocrine glandular cells: 90
Islets of Langerhans: 5
Ductal cells: 5

PANCREAS - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

3.0

GTEx sample id

Sample description

RPKM

Pancreas
RPKM: 3.0
Samples: 171

Max RPKM: 5.6
Min RPKM: 1.1
Std RPKM: 0.8
Median RPKM: 2.9
GTEX-XYKS-1226-SM-4BRVI 60-69 years, female 5.6
GTEX-PW2O-0826-SM-48TC5 20-29 years, male 5.1
GTEX-SE5C-0326-SM-4BRWX 40-49 years, female 5.1
GTEX-13N11-0226-SM-5KM3C 50-59 years, female 5.0
GTEX-NPJ8-2126-SM-3MJGK 40-49 years, male 4.9
GTEX-1497J-0426-SM-5Q5CO 60-69 years, male 4.8
GTEX-Q2AH-0926-SM-48TZK 40-49 years, male 4.7
GTEX-XV7Q-0926-SM-4BRVQ 40-49 years, female 4.7
GTEX-144FL-1526-SM-5Q5CA 50-59 years, male 4.6
GTEX-V955-0326-SM-4JBGV 60-69 years, male 4.6
GTEX-11TT1-0326-SM-5LUAY 20-29 years, male 4.5
GTEX-13FTX-1226-SM-5IFGN 20-29 years, female 4.5
GTEX-PSDG-1526-SM-48TCY 50-59 years, male 4.5
GTEX-QDVJ-1226-SM-48U1V 50-59 years, male 4.5
GTEX-V1D1-0726-SM-4JBH7 50-59 years, male 4.5
GTEX-TML8-0526-SM-32QOQ 40-49 years, female 4.4
GTEX-Y9LG-0726-SM-4VDS3 30-39 years, male 4.3
GTEX-ZAB5-0826-SM-5P9FU 50-59 years, male 4.3
GTEX-13U4I-1526-SM-5IFFF 40-49 years, female 4.2
GTEX-ZC5H-0826-SM-5N9FH 40-49 years, female 4.2
GTEX-QDVN-0926-SM-2I5GL 50-59 years, male 4.1
GTEX-WFG7-0426-SM-4LMK5 20-29 years, male 4.1
GTEX-139YR-1526-SM-5IFJ1 50-59 years, male 4.0
GTEX-13PL7-2226-SM-5L3IC 60-69 years, female 4.0
GTEX-WFON-0626-SM-4LVLX 40-49 years, male 4.0
GTEX-ZZPU-0726-SM-5N9C8 50-59 years, female 4.0
GTEX-S32W-0826-SM-4AD5Z 50-59 years, female 3.9
GTEX-S33H-1226-SM-4AD69 30-39 years, male 3.9
GTEX-11EQ9-1026-SM-5H134 30-39 years, male 3.8
GTEX-P4QS-1026-SM-3NMCW 60-69 years, male 3.8
GTEX-XQ8I-1926-SM-4BOOK 50-59 years, male 3.8
GTEX-YB5E-0526-SM-4VDSD 40-49 years, male 3.8
GTEX-ZF3C-2026-SM-4WWB5 50-59 years, female 3.8
GTEX-ZYY3-0826-SM-5E44R 60-69 years, female 3.8
GTEX-PLZ6-0726-SM-3P619 30-39 years, male 3.7
GTEX-QV44-0426-SM-4R1KF 50-59 years, male 3.7
GTEX-SNOS-0926-SM-4DM7A 40-49 years, male 3.7
GTEX-WFJO-0626-SM-4LVMC 30-39 years, male 3.7
GTEX-XBEW-1626-SM-4SOJP 40-49 years, male 3.7
GTEX-XPVG-0326-SM-4B653 50-59 years, male 3.7
GTEX-131XF-1426-SM-5BC68 60-69 years, male 3.6
GTEX-13VXT-1226-SM-5LU3M 20-29 years, female 3.6
GTEX-SIU7-0926-SM-4BRX1 50-59 years, male 3.6
GTEX-VJYA-0826-SM-4KL1M 60-69 years, male 3.6
GTEX-WFG8-0326-SM-4LVN4 20-29 years, male 3.6
GTEX-Y5LM-0526-SM-4V6G3 40-49 years, female 3.6
GTEX-132AR-1826-SM-5EGHR 50-59 years, female 3.5
GTEX-UJHI-0626-SM-3DB8T 50-59 years, female 3.5
GTEX-13YAN-2126-SM-5Q5C4 60-69 years, male 3.4
GTEX-PWOO-0626-SM-48TZH 40-49 years, female 3.4
GTEX-ZLWG-0326-SM-4WWC7 50-59 years, female 3.4
GTEX-ZTPG-1026-SM-5DUWP 20-29 years, female 3.4
GTEX-11VI4-0426-SM-5EGHZ 40-49 years, female 3.3
GTEX-14ICL-1126-SM-5S2RE 30-39 years, male 3.3
GTEX-NFK9-1626-SM-3LK5J 40-49 years, male 3.3
GTEX-WQUQ-2126-SM-4OOSO 60-69 years, male 3.3
GTEX-XBED-0226-SM-47JY8 60-69 years, male 3.3
GTEX-XGQ4-0226-SM-4GIDS 50-59 years, male 3.3
GTEX-Y5V5-1026-SM-5LUAH 60-69 years, female 3.3
GTEX-12WSN-0826-SM-5GCOF 40-49 years, male 3.2
GTEX-OHPM-1026-SM-3LK74 50-59 years, male 3.2
GTEX-Q734-0426-SM-48TZX 40-49 years, female 3.2
GTEX-R53T-0426-SM-48FEM 50-59 years, female 3.2
GTEX-R55D-1426-SM-48FEN 50-59 years, male 3.2
GTEX-S3XE-0526-SM-4AD4G 50-59 years, male 3.2
GTEX-T5JW-0226-SM-4DM7I 20-29 years, female 3.2
GTEX-YFCO-1026-SM-5LU9S 40-49 years, male 3.2
GTEX-ZP4G-0426-SM-4YCER 20-29 years, female 3.2
GTEX-11LCK-0226-SM-5A5M6 30-39 years, male 3.1
GTEX-13O61-2126-SM-5IJEO 60-69 years, male 3.1
GTEX-145MO-2126-SM-5Q5CZ 60-69 years, male 3.1
GTEX-T8EM-0826-SM-4DM76 40-49 years, male 3.1
GTEX-X4LF-0326-SM-4QAS9 50-59 years, male 3.1
GTEX-YEC3-0626-SM-5IFHZ 50-59 years, male 3.1
GTEX-11P7K-0526-SM-5BC5I 30-39 years, male 3.0
GTEX-13FH7-1426-SM-5IFIC 50-59 years, female 3.0
GTEX-145MN-1426-SM-5SI9H 30-39 years, male 3.0
GTEX-O5YT-1026-SM-3MJGF 20-29 years, male 3.0
GTEX-P4PP-1026-SM-3NM9O 30-39 years, female 3.0
GTEX-Q2AI-0426-SM-48U13 40-49 years, male 3.0
GTEX-RM2N-0326-SM-48FD8 50-59 years, male 3.0
GTEX-TMMY-1326-SM-4DXU9 40-49 years, female 3.0
GTEX-WI4N-1826-SM-4OOSF 40-49 years, female 3.0
GTEX-Y3IK-0426-SM-4WWE2 50-59 years, female 3.0
GTEX-ZAB4-1726-SM-5HL8C 40-49 years, male 3.0
GTEX-13FTW-0526-SM-5IFIP 40-49 years, male 2.9
GTEX-144GN-0826-SM-5LU5G 50-59 years, male 2.9
GTEX-OOBJ-1026-SM-3NB2L 60-69 years, male 2.9
GTEX-RWS6-1126-SM-47JXC 60-69 years, female 2.9
GTEX-132QS-0926-SM-5P9GB 60-69 years, male 2.8
GTEX-1399R-0426-SM-5IJE3 30-39 years, male 2.8
GTEX-R55G-0326-SM-48FDM 40-49 years, female 2.8
GTEX-UJMC-1126-SM-3GADP 50-59 years, male 2.8
GTEX-WH7G-0826-SM-4LVMR 40-49 years, male 2.8
GTEX-ZVT2-2026-SM-5NQ8Q 50-59 years, female 2.8
GTEX-ZYFG-0826-SM-5BC5T 60-69 years, female 2.8
GTEX-111CU-0526-SM-5EGHK 50-59 years, male 2.7
GTEX-1339X-1026-SM-5IFH5 40-49 years, male 2.7
GTEX-13CF3-1026-SM-5LZWY 60-69 years, female 2.7
GTEX-13D11-2226-SM-5IFEO 50-59 years, female 2.7
GTEX-QEL4-1326-SM-447AD 50-59 years, male 2.7
GTEX-S4P3-0626-SM-4AD59 50-59 years, female 2.7
GTEX-TKQ2-0426-SM-4DXUO 50-59 years, male 2.7
GTEX-X3Y1-0726-SM-3P5YU 40-49 years, male 2.7
GTEX-Y3I4-0826-SM-4TT2A 50-59 years, male 2.7
GTEX-ZG7Y-0326-SM-4WWEY 50-59 years, male 2.7
GTEX-ZV7C-0726-SM-59HKH 50-59 years, male 2.7
GTEX-117YX-0226-SM-5EGH6 50-59 years, male 2.6
GTEX-14E6E-1426-SM-5RQI2 30-39 years, male 2.6
GTEX-OOBK-1026-SM-48TC2 40-49 years, male 2.6
GTEX-XUW1-1726-SM-4BOOZ 50-59 years, female 2.6
GTEX-ZVZP-0626-SM-59HL5 50-59 years, male 2.6
GTEX-11XUK-0626-SM-5N9ES 40-49 years, female 2.5
GTEX-146FQ-1526-SM-5Q5CX 30-39 years, male 2.5
GTEX-14AS3-0326-SM-5Q5DB 40-49 years, female 2.5
GTEX-S95S-0726-SM-4B64H 60-69 years, male 2.5
GTEX-1399U-0926-SM-5IFHA 50-59 years, female 2.4
GTEX-QMRM-0326-SM-4R1K5 50-59 years, male 2.4
GTEX-SUCS-1426-SM-4DM5W 70-79 years, male 2.4
GTEX-WRHK-0226-SM-4MVOH 20-29 years, female 2.4
GTEX-X15G-0726-SM-4PQZ5 50-59 years, female 2.4
GTEX-YF7O-1326-SM-4W1ZR 50-59 years, male 2.4
GTEX-11I78-0626-SM-5A5LZ 50-59 years, female 2.3
GTEX-11ONC-0526-SM-5BC57 60-69 years, male 2.3
GTEX-131XG-1426-SM-5GCMO 50-59 years, female 2.3
GTEX-13FLV-0626-SM-5IFEY 50-59 years, male 2.3
GTEX-PX3G-1026-SM-48TZW 20-29 years, female 2.3
GTEX-QCQG-0426-SM-48U29 50-59 years, female 2.3
GTEX-QLQ7-0626-SM-4R1JT 60-69 years, male 2.3
GTEX-XMK1-0326-SM-4B652 40-49 years, male 2.3
GTEX-Y8LW-1026-SM-5IFJY 50-59 years, female 2.3
GTEX-1122O-0726-SM-5GIEV 60-69 years, female 2.2
GTEX-1399S-0326-SM-5IFFS 30-39 years, female 2.2
GTEX-13W3W-1026-SM-5IFG4 60-69 years, female 2.2
GTEX-146FR-0126-SM-5Q5F3 60-69 years, female 2.2
GTEX-OHPL-1026-SM-3MJGI 60-69 years, female 2.2
GTEX-W5WG-0826-SM-4RGNE 50-59 years, female 2.2
GTEX-WHWD-0726-SM-4OORX 50-59 years, male 2.2
GTEX-Y8E4-1326-SM-5IFIY 40-49 years, male 2.2
GTEX-ZLFU-0726-SM-57WF6 40-49 years, male 2.2
GTEX-ZYWO-1326-SM-5SI8X 40-49 years, female 2.2
GTEX-12WSL-0426-SM-5GCNX 50-59 years, male 2.1
GTEX-QLQW-0326-SM-447A8 30-39 years, male 2.1
GTEX-X5EB-0526-SM-46MVP 40-49 years, male 2.1
GTEX-ZT9W-0926-SM-57WFS 50-59 years, male 2.1
GTEX-1128S-0826-SM-5GZZI 60-69 years, female 2.0
GTEX-1211K-1126-SM-5EGGB 60-69 years, female 2.0
GTEX-12WSK-0226-SM-5BC62 40-49 years, female 2.0
GTEX-13OVI-0526-SM-5IFFQ 60-69 years, female 2.0
GTEX-QV31-0226-SM-447BO 30-39 years, male 2.0
GTEX-U4B1-0726-SM-4DXUA 40-49 years, male 2.0
GTEX-YEC4-1326-SM-5IFHG 40-49 years, male 2.0
GTEX-ZPIC-0926-SM-4WWFK 40-49 years, female 2.0
GTEX-11DXX-0926-SM-5H112 60-69 years, female 1.9
GTEX-11NSD-0526-SM-5A5LT 20-29 years, male 1.9
GTEX-12BJ1-1126-SM-5EGGG 60-69 years, male 1.9
GTEX-131XE-1926-SM-5IFER 50-59 years, male 1.9
GTEX-ZVP2-0726-SM-59HKY 50-59 years, male 1.9
GTEX-111YS-1226-SM-5EGGJ 60-69 years, male 1.8
GTEX-13X6H-0626-SM-5LU53 50-59 years, female 1.8
GTEX-145ME-0326-SM-5S2QO 40-49 years, female 1.8
GTEX-XXEK-1726-SM-4BRVB 50-59 years, male 1.8
GTEX-Y114-0826-SM-4TT77 50-59 years, female 1.8
GTEX-YB5K-1826-SM-5IFJC 40-49 years, female 1.8
GTEX-ZPU1-0226-SM-4WWC9 40-49 years, male 1.8
GTEX-12WSG-1026-SM-5EGII 50-59 years, female 1.7
GTEX-UPIC-0726-SM-3GADW 20-29 years, female 1.7
GTEX-P4PQ-1026-SM-3NMCN 60-69 years, male 1.4
GTEX-WYVS-0926-SM-4SOJV 40-49 years, female 1.4
GTEX-ZYW4-2126-SM-59HJ9 60-69 years, male 1.4
GTEX-13O1R-1826-SM-5KM3B 60-69 years, male 1.1
Show all

PANCREAS - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

15.0

FANTOM5 sample id

Sample description

Tags Per Million

Pancreas
Tags Per Million: 15.0
FF:10049-101G4 52 years, male 15.0

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