Cell atlas - ABC7-42404400C24.1 - The Human Protein Atlas

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ABC7-42404400C24.1

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION HUMAN CELLS

GENE/PROTEIN

Antibody validation

Dictionary
	Golgi apparatus

Human cell
	Golgi Apparatus

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GENERAL INFORMATION
Gene name	ABC7-42404400C24.1
Gene description
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION
Summary	Localized to the Golgi apparatus. Caution: Based on antibodies targeting proteins from multiple genes.
RNA cell category	Cell line enriched (SK-BR-3)
Protein evidence	Evidence at transcript level
Main location	Localized to the Golgi apparatus (approved)

DATA RELIABILITY
Reliability score	Approved based on 1 antibody. HPA064559
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ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enriched (SK-BR-3) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Localized to the Golgi apparatus. Caution: Based on antibodies targeting proteins from multiple genes.

Main location

Golgi apparatus (approved)


	Toggle channels	Low High G1 S G2 M N/A

Thumbnail	Antibody	Cell line	Location	Single-cell variation	Cell cycle dependent variation
	HPA064559	A549	Golgi apparatus
	HPA064559	HaCaT	Golgi apparatus
	HPA064559	U-2 OS	Golgi apparatus

GENE INFORMATION
Gene name	ABC7-42404400C24.1
Synonyms
Description
Entrez gene summary
Chromosome	10
Cytoband	q11.22
Chromosome location (bp)	47750864 - 47763592
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000277758 (version 83.38)
Entrez gene	102724488
UniProt
neXtProt
Antibodypedia	ABC7-42404400C24.1 antibodies

PROTEIN BROWSER

ABC7-42404400C24.1-001	ABC7-42404400C24.1-004	ABC7-42404400C24.1-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ABC7-42404400C24.1-001 ENSP00000485217 ENST00000623662	X6R8R1 [Direct mapping] Synaptotagmin-15 Show all	Predicted intracellular proteins Show all	GO:0005509 [calcium ion binding] GO:0005515 [protein binding] GO:0005544 [calcium-dependent phospholipid binding] GO:0005886 [plasma membrane] GO:0016079 [synaptic vesicle exocytosis] GO:0017158 [regulation of calcium ion-dependent exocytosis] GO:0019905 [syntaxin binding] GO:0030276 [clathrin binding] GO:0048791 [calcium ion-dependent exocytosis of neurotransmitter] Show all	474 aa 52.2 kDa	No	0
ABC7-42404400C24.1-004 ENSP00000478933 ENST00000615923	A0A096LNH4 [Direct mapping] Synaptotagmin-15 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	444 aa 49.6 kDa	No	1
ABC7-42404400C24.1-201 ENSP00000482225 ENST00000622861		Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005515 [protein binding] Show all	390 aa 43.5 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.