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PATHOLOGY ATLAS LIVER CANCER

GENE/PROTEIN

Antibody validation

Dictionary

Liver cancer

LIVER CANCER - Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival, using best separation (to the left) and median separation (to the right). Patients were divided based on level of expression into one of the two groups "low" or "high". Below each Kaplan-Meier plot, corresponding expression cutoff, 5-year survival for patients with high expression, 5-year survival for patients with low expression and log-rank P value are displayed. For melanoma and glioma, 3-year survival is shown. The survival analysis is described in Assays & Annotation.

The tabs at the top of the survival analysis section can be used to switch between the different cancer subtypes.

Best separation

Median separation

Expression cutoffi

5-year survival for patients with higher expression than the expression cutoff.

82.5 FPKM 110.4 FPKM

5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

43% 43%

5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

56% 50%

Log-rank P valuei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

5.46e-2 3.21e-1

Interactive survival scatter plot (individual patient data)i

The Scatter Survival plot shows the clinical status for all individuals in the patient cohort, based on the same data as in the Kaplan-Meier plots. Living patients are shown in blue and deceased patients in red. The x-axis shows the expression levels (FPKM) of the investigated gene at the time of diagnosis and the y-axis shows the number of years of survival (living years) after the diagnosis.

Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or several category buttons to the left. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be changed to "x linear" by clicking on the "x log" button on the left. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.




Stage:


TCGA RNA samplesi

RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM

128.7

Number of samples

365

Samples

Sample

Description

FPKM

TCGA-DD-A3A7-01A 67 years, male, stage:iiib 712.0
TCGA-FV-A4ZP-01A 78 years, male, white, stage:iiia 507.7
TCGA-CC-A123-01A 24 years, female, asian, stage:iiia 447.4
TCGA-BC-A69H-01A 64 years, male, white, stage:ii 422.6
TCGA-DD-AACJ-01A 75 years, male, asian, stage:ii 419.7
TCGA-DD-AADO-01A 55 years, male, asian, stage:i 418.8
TCGA-CC-A7IG-01A 47 years, male, asian, stage:ii 395.3
TCGA-DD-AACO-01A 40 years, male, asian, stage:i 393.9
TCGA-DD-AAD5-01A 54 years, male, asian, stage:i 356.5
TCGA-DD-AACG-01A 52 years, male, asian, stage:ii 345.8
TCGA-G3-A25S-01A 64 years, male, white, stage:i 335.6
TCGA-G3-A25X-01A 73 years, male, asian, stage:ii 319.8
TCGA-DD-AACI-01A 69 years, male, asian, stage:ii 312.8
TCGA-KR-A7K7-01A 61 years, female, white, stage:ii 288.8
TCGA-FV-A495-01A 51 years, female, white, stage:ii 267.7
TCGA-DD-AADI-01A 43 years, female, asian, stage:i 262.2
TCGA-DD-A3A9-01A 64 years, female, white, stage:ivb 260.9
TCGA-DD-AAE4-01A 49 years, female, asian, stage:i 257.1
TCGA-ED-A7PZ-01A 61 years, male, asian, stage:ii 256.1
TCGA-ES-A2HS-01A 80 years, male, white, stage:i 250.8
TCGA-DD-AAEE-01A 55 years, male, asian, stage:i 249.7
TCGA-DD-AACL-01A 66 years, female, asian, stage:i 246.8
TCGA-DD-A116-01A 68 years, male, asian, stage:iiia 244.4
TCGA-CC-A5UD-01A 45 years, male, asian, stage:iiia 241.9
TCGA-DD-AADS-01A 63 years, male, asian, stage:i 241.8
TCGA-DD-AAVU-01A 46 years, male, asian, stage:ii 230.5
TCGA-DD-A119-01A 40 years, male, asian, stage:iv 228.8
TCGA-DD-AACD-01A 48 years, male, asian, stage:i 228.5
TCGA-WQ-AB4B-01A 62 years, male, white, stage:ii 226.5
TCGA-DD-AAE0-01A 45 years, female, asian, stage:iiia 225.6
TCGA-CC-A7IL-01A 61 years, male, asian, stage:iiia 224.9
TCGA-2Y-A9H1-01A 58 years, male, white, stage:i 224.4
TCGA-RG-A7D4-01A 69 years, male, black or african american, stage:ii 221.0
TCGA-DD-A39V-01A 77 years, male, white, stage:ii 220.1
TCGA-O8-A75V-01A 54 years, male, stage:i 220.0
TCGA-G3-AAUZ-01A 48 years, male, stage:i 219.1
TCGA-DD-AAVV-01A 56 years, male, asian, stage:ii 215.7
TCGA-DD-AADM-01A 58 years, male, asian, stage:ii 211.7
TCGA-DD-AACB-01A 74 years, female, asian, stage:i 209.7
TCGA-CC-A8HV-01A 51 years, female, asian, stage:ii 209.3
TCGA-DD-A3A6-01A 72 years, female, white, stage:ii 208.4
TCGA-5C-AAPD-01A 61 years, male, asian, stage:ii 207.2
TCGA-BC-A217-01A 75 years, female, white, stage:ii 207.0
TCGA-DD-A39Y-01A 67 years, male, asian, stage:i 206.2
TCGA-2Y-A9GY-01A 64 years, female, white, stage:ii 200.1
TCGA-DD-A73D-01A 68 years, female, white, stage:ii 197.3
TCGA-MI-A75I-01A 61 years, male, black or african american 196.4
TCGA-CC-A3M9-01A 45 years, male, asian, stage:iiia 194.6
TCGA-DD-AACS-01A 39 years, male, asian, stage:i 194.0
TCGA-DD-AADN-01A 59 years, male, asian, stage:i 193.0
TCGA-UB-A7MF-01A 57 years, male, white, stage:iiia 192.8
TCGA-DD-A39Z-01A 43 years, female, stage:ii 190.7
TCGA-CC-A5UE-01A 48 years, male, asian, stage:iiib 190.4
TCGA-ES-A2HT-01A 54 years, male, black or african american, stage:i 190.3
TCGA-G3-A25Z-01A 58 years, male, asian, stage:i 188.8
TCGA-CC-A8HT-01A 74 years, male, asian, stage:iiia 188.4
TCGA-CC-A1HT-01A 50 years, male, asian, stage:iiia 187.5
TCGA-DD-AAVR-01A 44 years, male, asian, stage:i 187.2
TCGA-DD-A73G-01A 73 years, female, white, stage:i 185.9
TCGA-G3-AAV5-01A 67 years, male, white, stage:ii 183.5
TCGA-DD-AAEB-01A 60 years, male, asian, stage:i 180.8
TCGA-G3-A25T-01A 45 years, female, white, stage:iiia 178.2
TCGA-G3-A3CJ-01A 52 years, male, american indian or alaska native, stage:ii 174.6
TCGA-RC-A7SH-01A 42 years, male, asian, stage:ii 174.2
TCGA-DD-A39X-01A 78 years, female, white, stage:i 173.4
TCGA-2Y-A9H3-01A 45 years, male, white, stage:ii 171.9
TCGA-DD-A3A1-01A 65 years, male, stage:iiia 170.3
TCGA-DD-A3A3-01A 45 years, male, asian, stage:i 168.2
TCGA-DD-A1EL-01A 23 years, male, black or african american, stage:ii 167.8
TCGA-ED-A7PX-01A 48 years, female, asian, stage:ii 166.6
TCGA-DD-A4NP-01A 32 years, male, white, stage:i 164.1
TCGA-G3-AAV6-01A 53 years, female, white, stage:iiia 161.8
TCGA-DD-AADQ-01A 59 years, male, asian, stage:ii 161.2
TCGA-DD-AADR-01A 58 years, male, asian, stage:i 159.3
TCGA-CC-5259-01A 60 years, female, asian, stage:iiic 159.1
TCGA-WQ-A9G7-01A female, white 158.7
TCGA-CC-A7II-01A 55 years, male, asian, stage:iiia 158.6
TCGA-DD-AADJ-01A 70 years, female, asian, stage:i 157.5
TCGA-DD-AAC8-01A 72 years, male, asian, stage:i 157.4
TCGA-DD-AACU-01A 59 years, male, asian, stage:i 157.1
TCGA-DD-AAD6-01A 66 years, male, asian, stage:iiia 156.3
TCGA-3K-AAZ8-01A 65 years, male, black or african american, stage:iiib 154.9
TCGA-G3-A5SJ-01A 59 years, male, white, stage:i 154.8
TCGA-RC-A6M6-01A 75 years, male, white, stage:ii 153.9
TCGA-EP-A3RK-01A 73 years, male, white, stage:iiia 153.8
TCGA-G3-AAV7-01A 38 years, male, asian, stage:ii 152.0
TCGA-UB-A7MA-01A 62 years, female, white, stage:ii 151.7
TCGA-DD-AAVP-01A 48 years, male, asian, stage:i 151.7
TCGA-G3-AAV0-01A 58 years, male, asian, stage:i 150.8
TCGA-ZP-A9D2-01A 51 years, male, white 150.3
TCGA-DD-A1EI-01A 46 years, male, asian, stage:i 150.3
TCGA-BW-A5NO-01A 50 years, male, black or african american, stage:iiia 148.7
TCGA-EP-A2KC-01A 62 years, male, black or african american, stage:i 148.7
TCGA-KR-A7K8-01A 57 years, male, stage:i 148.4
TCGA-BC-A112-01A 80 years, male, white 147.4
TCGA-DD-AACP-01A 65 years, male, asian, stage:i 147.4
TCGA-2Y-A9H0-01A 49 years, male, white, stage:iiia 147.1
TCGA-CC-5263-01A 35 years, male, asian, stage:iiia 146.7
TCGA-WX-AA47-01A 33 years, female, white, stage:iiia 144.8
TCGA-G3-A7M9-01A 70 years, male, white, stage:iiib 144.4
TCGA-DD-AADU-01A 60 years, male, asian, stage:ii 143.8
TCGA-DD-AA3A-01A 81 years, female, white, stage:i 143.6
TCGA-ED-A7PY-01A 20 years, female, asian, stage:ii 142.7
TCGA-DD-AADG-01A 70 years, male, asian, stage:iiia 142.5
TCGA-DD-A11A-01A 67 years, male, black or african american, stage:i 142.4
TCGA-ED-A7XO-01A 29 years, male, asian, stage:iiia 142.2
TCGA-CC-A3MC-01A 54 years, male, asian, stage:iiia 141.7
TCGA-UB-A7MD-01A 67 years, male, black or african american, stage:i 139.8
TCGA-BC-A10Z-01A 62 years, female, white, stage:i 139.4
TCGA-CC-A9FW-01A 68 years, male, asian, stage:iiia 139.2
TCGA-BD-A3EP-01A 76 years, female, black or african american, stage:i 138.5
TCGA-DD-AADF-01A 64 years, female, asian, stage:i 138.4
TCGA-MI-A75H-01A 77 years, male, white 138.3
TCGA-DD-AAVQ-01A 38 years, male, asian, stage:i 136.3
TCGA-G3-A7M5-01A 76 years, male, asian, stage:i 136.2
TCGA-2Y-A9H4-01A 68 years, male, black or african american, stage:i 135.9
TCGA-RC-A7SK-01A 59 years, male, asian, stage:i 135.8
TCGA-CC-A3MB-01A 36 years, male, asian, stage:iiia 135.7
TCGA-LG-A9QC-01A 48 years, male, white, stage:i 134.0
TCGA-DD-AAEA-01A 65 years, male, asian, stage:i 133.5
TCGA-DD-AAE3-01A 50 years, male, asian, stage:i 133.5
TCGA-G3-A25Y-01A 52 years, female, asian, stage:i 133.3
TCGA-BC-4072-01B 74 years, female, white, stage:iiia 132.5
TCGA-DD-AAE6-01A 59 years, female, asian, stage:i 132.4
TCGA-2Y-A9GS-01A 58 years, male, white 132.1
TCGA-CC-A5UC-01A 63 years, male, asian, stage:iiia 132.0
TCGA-RC-A7SB-01A 53 years, male, asian, stage:ii 130.2
TCGA-K7-A5RG-01A 66 years, male, black or african american, stage:i 130.1
TCGA-CC-5262-01A 67 years, male, asian, stage:iiic 129.9
TCGA-DD-AAE9-01A 69 years, male, asian, stage:i 129.9
TCGA-DD-AAED-01A 51 years, male, asian, stage:i 129.8
TCGA-DD-AACX-01A 66 years, male, asian, stage:ii 129.8
TCGA-DD-AAC9-01A 51 years, male, asian, stage:i 129.5
TCGA-BC-A3KF-01A 66 years, female, white, stage:i 129.3
TCGA-G3-A7M7-01A 65 years, male, white, stage:i 129.0
TCGA-QA-A7B7-01A 48 years, male, black or african american, stage:ii 128.6
TCGA-EP-A3JL-01A 76 years, male, white, stage:i 128.5
TCGA-ZS-A9CD-01A 73 years, male, white, stage:ii 128.5
TCGA-DD-A115-01A 53 years, male, white, stage:iiia 128.2
TCGA-CC-A8HU-01A 39 years, female, asian, stage:iiia 128.1
TCGA-DD-AACF-01A 68 years, male, asian, stage:i 127.2
TCGA-DD-AAD8-01A 73 years, female, asian, stage:i 126.5
TCGA-DD-AACV-01A 53 years, male, asian, stage:i 126.5
TCGA-T1-A6J8-01A 68 years, male, white 126.4
TCGA-DD-AACC-01A 61 years, male, asian, stage:i 126.2
TCGA-MI-A75C-01A 64 years, male, white, stage:i 125.5
TCGA-DD-AAEG-01A 59 years, female, asian, stage:i 125.3
TCGA-BC-A10W-01A 50 years, male, asian 124.3
TCGA-KR-A7K2-01A 64 years, male, white, stage:i 124.2
TCGA-5C-A9VH-01A 70 years, male, white, stage:i 121.8
TCGA-BC-A69I-01A 69 years, male, white, stage:i 121.4
TCGA-DD-A4NN-01A 56 years, female, white, stage:i 120.8
TCGA-BC-A5W4-01A 69 years, male, white, stage:iiia 120.8
TCGA-DD-AADD-01A 51 years, male, asian, stage:i 120.7
TCGA-UB-A7MC-01A 59 years, male, white, stage:iiia 120.6
TCGA-ZP-A9CZ-01A 72 years, male, asian 119.2
TCGA-CC-A7IE-01A 57 years, male, asian, stage:iiia 119.2
TCGA-K7-A6G5-01A 66 years, male, white, stage:i 118.3
TCGA-BC-A3KG-01A 68 years, female, white, stage:ii 118.0
TCGA-FV-A4ZQ-01A 52 years, male, white, stage:i 117.9
TCGA-DD-AACZ-01A 63 years, female, asian, stage:i 117.8
TCGA-G3-A7M6-01A 60 years, female, white, stage:i 116.9
TCGA-DD-AAEH-01A 73 years, male, asian, stage:i 116.5
TCGA-WX-AA44-01A 64 years, female, white, stage:i 116.4
TCGA-2Y-A9HB-01A 66 years, male, stage:i 116.0
TCGA-GJ-A6C0-01A 75 years, female, white, stage:ii 115.8
TCGA-CC-A7IJ-01A 56 years, male, asian, stage:ii 115.4
TCGA-GJ-A3OU-01A 59 years, male, white, stage:i 114.0
TCGA-2Y-A9H8-01A 85 years, female, white 113.7
TCGA-BD-A2L6-01A 69 years, male, white 113.4
TCGA-DD-A4NO-01A 66 years, male, white, stage:i 113.3
TCGA-DD-A4NQ-01A 60 years, male, white, stage:ii 113.1
TCGA-ZS-A9CE-01A 79 years, female, white, stage:ii 113.0
TCGA-FV-A2QQ-01A 80 years, male, white, stage:i 112.9
TCGA-DD-A1EG-01A 77 years, male, white, stage:i 112.7
TCGA-DD-AADK-01A 68 years, female, asian, stage:ii 112.5
TCGA-UB-A7ME-01A 51 years, male, asian, stage:i 112.4
TCGA-2Y-A9H6-01A 68 years, female, white, stage:i 112.4
TCGA-DD-AACH-01A 69 years, male, asian, stage:ii 112.2
TCGA-DD-A1EJ-01A 71 years, female, white, stage:iiic 111.6
TCGA-CC-A7IF-01A 59 years, male, asian, stage:iiia 110.9
TCGA-DD-A1EA-01A 68 years, male, asian, stage:ii 110.9
TCGA-NI-A8LF-01A 74 years, male, white, stage:i 110.4
TCGA-ED-A66X-01A 35 years, male, asian, stage:iiia 110.2
TCGA-RC-A7SF-01A 66 years, male, asian, stage:i 109.6
TCGA-MI-A75E-01A 61 years, male, white, stage:iiic 108.1
TCGA-ED-A459-01A 47 years, male, asian, stage:ii 108.0
TCGA-G3-AAV2-01A 50 years, male, white, stage:i 107.6
TCGA-5C-A9VG-01A 58 years, male, white, stage:ii 107.5
TCGA-DD-AACA-01A 65 years, male, asian, stage:i 106.4
TCGA-2Y-A9H2-01A 64 years, female, white, stage:i 106.3
TCGA-DD-AACE-01A 62 years, male, asian, stage:i 106.2
TCGA-DD-A4NA-01A 67 years, female, white, stage:iiic 106.0
TCGA-BC-A10Y-01A 76 years, male, white 105.9
TCGA-XR-A8TD-01A 49 years, female, white, stage:iiib 105.7
TCGA-CC-A7IK-01A 59 years, male, asian, stage:iiia 105.6
TCGA-PD-A5DF-01A 58 years, female, white, stage:iiib 104.4
TCGA-DD-A73B-01A 72 years, female, white, stage:i 104.1
TCGA-G3-A5SL-01A 70 years, male, white, stage:ii 104.1
TCGA-UB-A7MB-01A 24 years, male, white, stage:ii 103.8
TCGA-CC-5264-01A 71 years, male, asian, stage:iiia 103.4
TCGA-LG-A9QD-01A 68 years, male, white, stage:iiia 103.0
TCGA-ZP-A9CV-01A 59 years, male, white 101.7
TCGA-G3-A5SI-01A 44 years, male, asian, stage:ii 101.6
TCGA-FV-A3R2-01A 75 years, male, white, stage:i 101.3
TCGA-BC-A10S-01A 81 years, male, white 100.8
TCGA-DD-AAE1-01A 52 years, male, asian, stage:i 100.7
TCGA-CC-A3MA-01A 61 years, male, asian, stage:iiia 100.3
TCGA-G3-AAV3-01A 58 years, female, white, stage:ii 99.9
TCGA-DD-AAVZ-01A 38 years, male, asian, stage:i 99.8
TCGA-2Y-A9HA-01A 70 years, male, white, stage:ii 99.1
TCGA-DD-A4NR-01A 85 years, female, white, stage:i 98.9
TCGA-FV-A3I1-01A female, white, stage:ii 98.8
TCGA-2Y-A9H7-01A 81 years, female, white, stage:i 98.2
TCGA-ZP-A9D4-01A 64 years, female, white 98.1
TCGA-DD-A4NJ-01A 54 years, female, white, stage:ii 97.9
TCGA-G3-A3CG-01A 80 years, male, white, stage:i 97.3
TCGA-DD-A4NH-01A 65 years, female, white, stage:iiib 97.2
TCGA-HP-A5N0-01A 88 years, female 96.9
TCGA-RC-A7S9-01A 47 years, female, asian, stage:i 96.4
TCGA-DD-AAVX-01A 38 years, male, asian, stage:ii 96.0
TCGA-CC-A9FS-01A 55 years, male, asian, stage:ii 95.7
TCGA-DD-AADL-01A 58 years, male, asian, stage:i 95.7
TCGA-2Y-A9H9-01A 70 years, male, white, stage:i 95.4
TCGA-DD-A73F-01A 77 years, female, white, stage:i 95.2
TCGA-G3-A5SM-01A 58 years, male, white, stage:ii 94.2
TCGA-DD-AAD2-01A 66 years, male, asian, stage:i 94.2
TCGA-DD-AAVS-01A 56 years, male, asian, stage:i 94.1
TCGA-BC-A110-01A 51 years, female, black or african american 94.1
TCGA-FV-A496-01A 84 years, female, white, stage:i 93.8
TCGA-DD-A3A8-01A 75 years, male, white, stage:ii 93.7
TCGA-DD-AACN-01A 32 years, male, asian, stage:i 93.6
TCGA-BC-A8YO-01A 66 years, female, white, stage:iiic 93.3
TCGA-UB-AA0U-01A 60 years, male, white, stage:ii 93.2
TCGA-5R-AA1C-01A 57 years, male, white, stage:ii 93.1
TCGA-DD-AADP-01A 45 years, male, asian, stage:i 92.9
TCGA-DD-AAVY-01A 56 years, male, asian, stage:iiia 92.6
TCGA-DD-AACW-01A 43 years, male, asian, stage:i 92.4
TCGA-DD-AADA-01A 66 years, female, asian, stage:i 92.4
TCGA-ED-A7XP-01A 53 years, female, asian, stage:ii 91.2
TCGA-RC-A6M4-01A 74 years, female, white, stage:iiia 91.0
TCGA-BC-A10U-01A 69 years, male, white 90.7
TCGA-G3-A25V-01A 68 years, male, white, stage:i 90.4
TCGA-EP-A2KA-01A 52 years, female, white, stage:iiia 90.1
TCGA-KR-A7K0-01A 65 years, male, white, stage:i 89.6
TCGA-DD-A73E-01A 66 years, male, white, stage:i 89.5
TCGA-ED-A5KG-01A 60 years, female, asian, stage:ii 89.3
TCGA-EP-A2KB-01A 46 years, female, white, stage:i 89.2
TCGA-CC-A7IH-01A 58 years, male, asian, stage:iiia 88.7
TCGA-HP-A5MZ-01A 62 years, male, stage:i 88.5
TCGA-G3-AAV4-01A 83 years, female, white, stage:i 88.0
TCGA-K7-A5RF-01A 64 years, male, white, stage:i 87.7
TCGA-DD-AAW3-01A 69 years, male, asian, stage:i 87.6
TCGA-CC-5260-01A 61 years, female, asian, stage:iiic 87.6
TCGA-G3-A3CH-01A 53 years, male, asian, stage:iiia 87.3
TCGA-FV-A3I0-01A 76 years, female, white, stage:ii 86.7
TCGA-GJ-A9DB-01A 68 years, male, white, stage:i 86.7
TCGA-WJ-A86L-01A 68 years, female, white, stage:i 86.4
TCGA-DD-A114-01A 42 years, male, black or african american, stage:ii 85.2
TCGA-DD-AACQ-01A 50 years, male, asian, stage:ii 85.2
TCGA-DD-A11C-01A 69 years, male, white, stage:i 84.9
TCGA-BC-A216-01A 62 years, female, white, stage:iiia 84.9
TCGA-DD-AADC-01A 53 years, male, asian, stage:i 84.8
TCGA-FV-A2QR-01A male, white, stage:i 84.7
TCGA-K7-AAU7-01A 61 years, male, white, stage:ii 84.7
TCGA-DD-A73A-01A 71 years, male, white, stage:i 84.4
TCGA-CC-A8HS-01A 18 years, male, asian, stage:iiic 84.1
TCGA-ED-A8O6-01A 50 years, female, asian, stage:iiia 84.0
TCGA-DD-AADV-01A 50 years, male, asian, stage:i 83.8
TCGA-BC-4073-01B 73 years, male, white, stage:iiia 83.3
TCGA-YA-A8S7-01A 69 years, male, white, stage:iiia 83.0
TCGA-NI-A4U2-01A 71 years, male, white, stage:iiia 82.8
TCGA-CC-5261-01A 44 years, male, asian, stage:ii 82.7
TCGA-DD-A113-01A 55 years, female, white, stage:ii 82.3
TCGA-G3-A3CK-01A 61 years, male, asian, stage:i 81.1
TCGA-DD-AACY-01A 61 years, male, asian, stage:i 80.5
TCGA-DD-A3A5-01A 66 years, female, white, stage:iii 79.7
TCGA-DD-AAVW-01A 35 years, male, asian, stage:i 79.2
TCGA-BC-A10Q-01A 72 years, female, white 78.9
TCGA-EP-A26S-01A 70 years, male, white, stage:i 78.8
TCGA-DD-A3A2-01A 76 years, female, white, stage:i 78.7
TCGA-5R-AAAM-01A 65 years, female, white, stage:ii 78.7
TCGA-DD-AAW2-01A 69 years, male, asian, stage:i 78.2
TCGA-ZS-A9CG-01A 55 years, male, white, stage:ii 78.1
TCGA-DD-AACT-01A 69 years, female, asian, stage:i 77.9
TCGA-5R-AA1D-01A 17 years, female, white, stage:iiia 77.8
TCGA-DD-AAW0-01A 54 years, male, asian, stage:i 77.7
TCGA-XR-A8TG-01A 59 years, male, white, stage:i 77.7
TCGA-DD-AAE2-01A 51 years, male, asian, stage:i 77.1
TCGA-2Y-A9GW-01A 64 years, male, white, stage:i 77.1
TCGA-DD-A4NK-01A 80 years, female, white, stage:iiia 77.0
TCGA-DD-AAD0-01A 73 years, female, asian, stage:i 76.8
TCGA-DD-A11D-01A 57 years, female, white, stage:i 76.6
TCGA-DD-AAD3-01A 43 years, male, asian, stage:i 76.0
TCGA-DD-AAE7-01A 72 years, male, asian, stage:i 75.4
TCGA-XR-A8TF-01A 74 years, male, white, stage:i 74.5
TCGA-DD-A1EC-01A 20 years, female, white, stage:i 74.5
TCGA-DD-A1EB-01A 72 years, female, stage:i 74.3
TCGA-G3-A6UC-01A 65 years, male, white, stage:iiib 74.3
TCGA-4R-AA8I-01A 66 years, male, white, stage:ii 74.0
TCGA-DD-AAD1-01A 51 years, female, asian, stage:i 74.0
TCGA-MR-A8JO-01A 34 years, male, white, stage:i 73.5
TCGA-G3-A7M8-01A 31 years, male, asian, stage:i 73.4
TCGA-G3-AAV1-01A 51 years, male, asian, stage:iiic 73.1
TCGA-BD-A3ER-01A 62 years, male, white, stage:ii 72.8
TCGA-DD-A73C-01A 65 years, female, white, stage:iiia 72.4
TCGA-EP-A12J-01A 63 years, male, black or african american, stage:i 70.9
TCGA-DD-A118-01A 77 years, female, white, stage:ii 70.7
TCGA-2Y-A9GV-01A 54 years, female, white, stage:i 70.3
TCGA-DD-AADW-01A 48 years, male, asian, stage:i 70.3
TCGA-G3-A25U-01A 63 years, female, asian, stage:i 69.7
TCGA-ED-A97K-01A 54 years, male, asian, stage:iiia 69.2
TCGA-XR-A8TC-01A 43 years, female, white, stage:i 69.2
TCGA-ED-A4XI-01A 58 years, male, asian, stage:ii 68.7
TCGA-DD-AACK-01A 70 years, male, asian, stage:i 68.6
TCGA-FV-A23B-01A 70 years, female, white, stage:ii 68.4
TCGA-DD-AADY-01A 55 years, female, asian, stage:i 68.0
TCGA-ED-A66Y-01A 51 years, female, asian, stage:iiia 67.9
TCGA-2Y-A9GX-01A 68 years, male, white, stage:i 67.8
TCGA-DD-A1EE-01A 73 years, male, white, stage:iiia 67.1
TCGA-DD-AADB-01A 51 years, male, asian, stage:i 66.9
TCGA-ED-A627-01A 74 years, male, white, stage:i 66.6
TCGA-BC-A10T-01A 76 years, male, white 66.2
TCGA-ZP-A9CY-01A 66 years, female, white 66.2
TCGA-DD-A4NV-01A 61 years, male, white, stage:iiia 65.3
TCGA-DD-AAW1-01A 55 years, male, asian, stage:iiia 65.0
TCGA-DD-A4NB-01A 25 years, male, white, stage:i 64.8
TCGA-DD-AAEK-01A 51 years, male, asian, stage:ii 64.3
TCGA-MR-A520-01A 58 years, male, white, stage:i 64.3
TCGA-DD-A3A4-01A 37 years, male, white, stage:iiia 64.3
TCGA-ZP-A9D1-01A 56 years, female, white 64.0
TCGA-DD-A4NE-01A 75 years, female, white, stage:iiia 63.8
TCGA-DD-A11B-01A 73 years, male, white, stage:i 62.6
TCGA-DD-A4NS-01A 62 years, female, white, stage:i 62.3
TCGA-DD-A39W-01A 29 years, female, white, stage:iii 62.3
TCGA-MI-A75G-01A 63 years, male, white, stage:ii 61.7
TCGA-G3-A3CI-01A 71 years, male, white, stage:i 61.6
TCGA-WX-AA46-01A 62 years, male, white, stage:ii 61.5
TCGA-DD-A4NL-01A 46 years, male, white, stage:i 61.0
TCGA-DD-A1EK-01A 64 years, female, white, stage:ivb 60.2
TCGA-DD-A4ND-01A 56 years, female, white, stage:i 59.8
TCGA-DD-A1EH-01A 23 years, male, white, stage:iii 57.6
TCGA-XR-A8TE-01A 16 years, male, white, stage:iiia 56.9
TCGA-LG-A6GG-01A 79 years, female, white, stage:ii 56.8
TCGA-RC-A6M5-01A 20 years, female, white, stage:iva 55.6
TCGA-DD-A1ED-01A 68 years, male, white, stage:i 54.8
TCGA-ED-A8O5-01A 59 years, female, asian, stage:iiia 54.5
TCGA-DD-A4NG-01A 77 years, male, white, stage:iiia 53.3
TCGA-DD-A1EF-01A 57 years, female, white, stage:i 53.3
TCGA-BC-A10X-01A 52 years, female, white, stage:iiia 52.8
TCGA-DD-A4NF-01A 72 years, male, white, stage:i 52.8
TCGA-2Y-A9H5-01A 59 years, female, white, stage:i 51.4
TCGA-G3-A5SK-01A 58 years, male, white, stage:i 50.9
TCGA-2Y-A9GZ-01A 82 years, female, white, stage:ii 50.7
TCGA-DD-A4NI-01A 67 years, male, white, stage:ii 50.1
TCGA-DD-AAEI-01A 72 years, male, asian, stage:i 49.7
TCGA-FV-A3R3-01A 38 years, female, white, stage:i 49.2
TCGA-2Y-A9GU-01A 55 years, female, white, stage:i 48.5
TCGA-UB-AA0V-01A 69 years, female, white, stage:i 43.6
TCGA-ZP-A9D0-01A 67 years, female, black or african american 42.7
TCGA-2Y-A9GT-01A 51 years, male, white, stage:i 42.3
TCGA-BC-A10R-01A 66 years, female, white 42.1
TCGA-ZS-A9CF-01A 64 years, male, white, stage:ii 39.6
TCGA-CC-5258-01A 48 years, male, asian, stage:ii 36.7
TCGA-ED-A82E-01A 60 years, female, asian, stage:iiia 32.1
Show all

LIVER CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody HPA042775

Antibody HPA048147

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

Click images for details












































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