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ESF1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.6TPM
GTEx:5.2RPKM
FANTOM5:6.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA047083

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

8.6
overview Male, age 54 Sample 1
TPM: 8.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 8.4
Min RPKM: 3.1
Std RPKM: 0.9
Median RPKM: 5.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 8.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.4
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 7.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 7.1
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 7.0
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 6.9
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 6.8
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 6.6
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 6.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 6.6
Show all
Colon - Transverse
RPKM: 5.3
Samples: 196

Max RPKM: 8.9
Min RPKM: 1.5
Std RPKM: 0.9
Median RPKM: 5.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 8.9
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 7.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 7.6
GTEX-144GM-1226-SM-5LU52 20-29 years, male 7.5
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 7.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 7.3
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 7.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 7.2
GTEX-1128S-1626-SM-5H12O 60-69 years, female 7.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 7.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

6.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 6.4
FF:10014-101C5 62,83,84 years, mixed 6.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.