Tissue expression of GCN1 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	14.7	TPM
GTEx:	15.6	RPKM
FANTOM5:	6.3	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Glandular cells:	Medium
Myoepithelial cells:	Medium

Antibody staining	Antibody HPA018799	Antibody HPA019648	Antibody HPA024367
Adipocytes	Not detected	Not detected	Medium
Glandular cells	Medium	High	High
Myoepithelial cells	Medium	High	Medium

BREAST - HPA RNA-seq

Average TPM	14.7

Female, age 52

Sample 1
TPM: 14.3

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 13.7

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 16.1

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 14.6

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	15.6

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 15.6

Samples: 214

Max RPKM: 32.4
Min RPKM: 6.7
Std RPKM: 3.2
Median RPKM: 15.2

GTEX-13PVQ-1026-SM-5KM3M

50-59 years, male

32.4

GTEX-11DZ1-0326-SM-5N9BN

50-59 years, male

30.3

GTEX-XUZC-1626-SM-4BRVP

30-39 years, female

26.9

GTEX-11P82-1326-SM-5HL62

20-29 years, male

23.0

GTEX-1117F-2826-SM-5GZXL

60-69 years, female

22.5

GTEX-11WQK-2426-SM-5GU5C

50-59 years, male

22.0

GTEX-13N1W-0626-SM-5MR4U

70-79 years, male

22.0

GTEX-133LE-1726-SM-5K7VQ

20-29 years, female

21.1

GTEX-132Q8-1426-SM-5EGK7

60-69 years, male

21.0

GTEX-139T8-0826-SM-5L3DE

60-69 years, male

21.0

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	6.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 6.3

FF:10080-102A8

77 years, female

6.3