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ALKBH1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.8TPM
GTEx:4.1RPKM
FANTOM5:8.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA044087

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

2.8
overview Male, age 54 Sample 1
TPM: 2.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.5
Samples: 149

Max RPKM: 7.6
Min RPKM: 2.5
Std RPKM: 0.8
Median RPKM: 4.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 7.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 7.0
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 6.3
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 6.2
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 6.2
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 6.2
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 6.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 6.0
GTEX-12696-1926-SM-5EGJT 60-69 years, male 6.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 5.9
Show all
Colon - Transverse
RPKM: 3.9
Samples: 196

Max RPKM: 6.5
Min RPKM: 0.8
Std RPKM: 0.7
Median RPKM: 3.8
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 6.5
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 6.2
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 6.0
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 5.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 5.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 5.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 5.5
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 5.5
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 5.5
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 5.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.9
FF:10014-101C5 62,83,84 years, mixed 8.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.