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SLC1A5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:50.6TPM
GTEx:19.9RPKM
FANTOM5:47.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA035239

  

Antibody HPA035240

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium  
      
   
   

COLON - HPA RNA-seq

Average TPM

50.6
overview Male, age 54 Sample 1
TPM: 54.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 69.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 59.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 33.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 30.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 46.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 56.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 49.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 35.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 51.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 65.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 55.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 48.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

19.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.2
Samples: 149

Max RPKM: 34.3
Min RPKM: 2.6
Std RPKM: 5.3
Median RPKM: 8.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 34.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 28.3
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 28.3
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 26.0
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 24.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 23.4
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 21.6
GTEX-XBED-1726-SM-47JYO 60-69 years, male 21.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 19.6
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 18.7
Show all
Colon - Transverse
RPKM: 27.4
Samples: 196

Max RPKM: 112.3
Min RPKM: 3.7
Std RPKM: 14.4
Median RPKM: 27.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 112.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 85.5
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 71.1
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 68.6
GTEX-QLQW-0426-SM-447A7 30-39 years, male 60.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 54.6
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 52.1
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 51.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 50.8
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 50.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

47.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 47.8
FF:10014-101C5 62,83,84 years, mixed 47.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.