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MED31

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.5TPM
GTEx:5.5RPKM
FANTOM5:14.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA035947

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

9.5
overview Male, age 54 Sample 1
TPM: 11.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.6
Samples: 149

Max RPKM: 9.5
Min RPKM: 2.4
Std RPKM: 1.2
Median RPKM: 5.5
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 9.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 8.7
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 8.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 8.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 7.9
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 7.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 7.7
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 7.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 7.4
Show all
Colon - Transverse
RPKM: 5.4
Samples: 196

Max RPKM: 11.3
Min RPKM: 2.5
Std RPKM: 1.4
Median RPKM: 5.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 11.3
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 10.8
GTEX-144GN-1126-SM-5LU33 50-59 years, male 9.1
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 8.8
GTEX-139YR-2126-SM-5KM11 50-59 years, male 8.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 8.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 8.1
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 8.1
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 7.9
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 7.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

14.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 14.6
FF:10014-101C5 62,83,84 years, mixed 14.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.