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PNO1

SMALL INTESTINE - Expression summary

RNA expression
HPA:7.2TPM
GTEx:5.1RPKM
FANTOM5:20.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

7.2
overview Male, age 65 Sample 1
TPM: 5.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 5.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 9.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 8.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

5.1

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 5.1
Samples: 88

Max RPKM: 12.4
Min RPKM: 1.0
Std RPKM: 1.9
Median RPKM: 4.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 12.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 10.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 10.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 9.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 9.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 8.6
GTEX-13111-1426-SM-5DUW3 50-59 years, male 8.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 8.5
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 7.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 7.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

20.1

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 20.1
FF:10024-101D6 15,40,85 years, mixed 20.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.