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IMP4

SOFT TISSUE - Expression summary

RNA expression
HPA:17.5TPM
GTEx:32.8RPKM
FANTOM5:37.6Tags Per Million

SOFT TISSUE - Annotated protein expression

Pending normal tissue analysis

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

17.5
N/A Female, age 80 Sample 1
TPM: 26.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 11.9
N/A Female, age 57 Sample 3
TPM: 15.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 24.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

32.8

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 31.8
Samples: 350

Max RPKM: 61.3
Min RPKM: 17.7
Std RPKM: 8.0
Median RPKM: 30.2
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 61.3
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 57.6
GTEX-12C56-1626-SM-5FQUO 20-29 years, male 55.0
GTEX-SUCS-1826-SM-32PM1 70-79 years, male 54.1
GTEX-ZYY3-0226-SM-5E45M 60-69 years, female 53.9
GTEX-OOBK-0226-SM-2YUMF 40-49 years, male 53.4
GTEX-13O1R-0226-SM-5K7U5 60-69 years, male 52.1
GTEX-1399U-2426-SM-5K7XB 50-59 years, female 51.5
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 51.4
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 50.5
Show all
Adipose - Visceral (Omentum)
RPKM: 34.2
Samples: 227

Max RPKM: 110.4
Min RPKM: 13.1
Std RPKM: 12.7
Median RPKM: 31.3
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 110.4
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 89.8
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 77.1
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 74.1
GTEX-U8XE-1926-SM-3DB98 30-39 years, male 64.3
GTEX-132QS-0826-SM-5K7WV 60-69 years, male 63.9
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 62.8
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 62.1
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 60.9
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 60.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

37.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 37.6
FF:10010-101C1 65,65,76 years, mixed 37.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.