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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

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Score

Score

Score

Antibodies

Column

 
 
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MGARP
  • TISSUE

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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

MGARP

Gene description

Mitochondria-localized glutamic acid-rich protein

Protein class

Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (adrenal gland)
GTEx:Tissue enriched (adrenal gland)
FANTOM5:Tissue enhanced (pituitary gland, retina)

Protein evidence

Evidence at protein level

Protein expression

Selective expression in adrenal gland, testis, ovary and cerebellum.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
HPA015994
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Adrenal gland

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (adrenal gland)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (adrenal gland)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (pituitary gland, retina)

GENE INFORMATION

Gene name

MGARP (HGNC Symbol)

Synonyms

C4orf49, CESP-1, HUMMR, OSAP

Description

Mitochondria-localized glutamic acid-rich protein (HGNC Symbol)

Entrez gene summary

Chromosome

4

Cytoband

q31.1

Chromosome location (bp)

139266163 - 139280338

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000137463 (version 83.38)

Entrez gene

84709

UniProt

Q8TDB4 (UniProt - Evidence at protein level)

neXtProt

NX_Q8TDB4

Antibodypedia

MGARP antibodies

PROTEIN BROWSER

MGARP-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

MGARP-001
ENSP00000381928
ENST00000398955
Q8TDB4 [Direct mapping]
Protein MGARP
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0006626 [protein targeting to mitochondrion]
GO:0008089 [anterograde axon cargo transport]
GO:0008090 [retrograde axon cargo transport]
GO:0010821 [regulation of mitochondrion organization]
GO:0010822 [positive regulation of mitochondrion organization]
GO:0019896 [axon transport of mitochondrion]
GO:0031307 [integral component of mitochondrial outer membrane]
GO:0071383 [cellular response to steroid hormone stimulus]
GO:0071456 [cellular response to hypoxia]
GO:0097211 [cellular response to gonadotropin-releasing hormone]
Show all
240 aa
25.4 kDa
No 1

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