We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CSRNP1
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS BREAST

GENE/PROTEIN

Dictionary

Breast

BREAST - Expression summary

RNA expression

HPA:44.5TPM
GTEx:41.8RPKM
FANTOM5:27.7Tags Per Million

BREAST - Annotated protein expression

Pending normal tissue analysis


BREAST - HPA RNA-seq

Average TPM

44.5

overview Female, age 52 Sample 1
TPM: 35
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 94.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 33.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 15.1
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

41.8

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 41.8
Samples: 214

Max RPKM: 135.6
Min RPKM: 11.8
Std RPKM: 20.0
Median RPKM: 37.9
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 135.6
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 133.6
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 119.1
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 99.8
GTEX-RU72-0626-SM-46MUI 50-59 years, female 96.7
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 92.2
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 90.1
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 81.1
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 80.7
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 79.8
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 77.9
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 77.5
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 75.0
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 74.4
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 71.8
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 71.1
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 71.0
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 70.7
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 68.7
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 66.9
GTEX-117XS-1926-SM-5GICO 60-69 years, male 66.7
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 66.3
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 65.7
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 64.3
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 63.1
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 61.5
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 60.5
GTEX-11EI6-0626-SM-5985T 60-69 years, male 60.2
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 59.6
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 59.3
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 58.8
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 58.5
GTEX-11OF3-1926-SM-59889 60-69 years, male 58.3
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 58.3
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 58.0
GTEX-QEL4-2126-SM-447AE 50-59 years, male 57.2
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 57.1
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 56.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 56.4
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 56.0
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 55.7
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 54.4
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 54.4
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 54.2
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 53.8
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 53.5
GTEX-R55D-0826-SM-48FEA 50-59 years, male 53.2
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 53.1
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 53.1
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 53.0
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 52.9
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 52.6
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 52.4
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 52.3
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 51.4
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 50.7
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 50.5
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 49.8
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 49.7
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 49.7
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 49.7
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 49.6
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 49.0
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 48.9
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 48.4
GTEX-13113-1726-SM-5GCOO 60-69 years, female 47.9
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 47.2
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 47.0
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 47.0
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 46.8
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 46.4
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 45.4
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 45.2
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 45.1
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 45.0
GTEX-REY6-2426-SM-48FF5 60-69 years, male 44.8
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 44.5
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 44.0
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 44.0
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 43.5
GTEX-111YS-1926-SM-5GICC 60-69 years, male 43.3
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 43.3
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 43.3
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 43.1
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 42.8
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 42.6
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 42.3
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 42.0
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 41.8
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 41.7
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 41.4
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 41.1
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 40.9
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 40.7
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 40.7
GTEX-14753-2426-SM-5LU8U 60-69 years, male 40.6
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 40.2
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 40.1
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 39.9
GTEX-QVJO-1826-SM-447C9 60-69 years, female 39.9
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 39.4
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 39.1
GTEX-X261-0626-SM-3NMD9 50-59 years, male 38.8
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 38.5
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 38.3
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 38.2
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 37.9
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 37.8
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 37.6
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 37.6
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 37.4
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 37.3
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 37.1
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 37.1
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 36.9
GTEX-144GM-0926-SM-5O994 20-29 years, male 36.6
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 36.5
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 36.4
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 36.4
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 36.3
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 36.0
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 35.9
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 35.7
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 35.6
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 35.5
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 35.5
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 34.8
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 34.7
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 34.4
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 34.3
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 34.2
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 33.8
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 33.5
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 33.4
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 33.3
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 32.9
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 32.2
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 32.1
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 32.0
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 31.9
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 31.5
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 31.5
GTEX-T6MN-0726-SM-32PML 50-59 years, male 31.3
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 31.2
GTEX-R53T-1526-SM-48FEK 50-59 years, female 31.2
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 31.1
GTEX-117YX-1426-SM-5H12H 50-59 years, male 31.0
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 31.0
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 31.0
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 30.1
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 29.9
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 29.7
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 29.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 28.9
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 28.4
GTEX-XBED-1626-SM-47JYN 60-69 years, male 28.3
GTEX-1192X-2326-SM-5987X 50-59 years, male 28.2
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 27.9
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 27.3
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 27.3
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 27.2
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 27.2
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 27.1
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 26.7
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 26.5
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 26.5
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 26.4
GTEX-S341-1526-SM-4AD6K 40-49 years, female 26.3
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 26.1
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 25.6
GTEX-11P82-1326-SM-5HL62 20-29 years, male 25.5
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 25.5
GTEX-11P81-1926-SM-5BC53 30-39 years, female 25.4
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 25.4
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 25.4
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 25.3
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 24.6
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 24.5
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 24.4
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 24.3
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 24.0
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 24.0
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 23.1
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 22.6
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 22.5
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 22.4
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 22.2
GTEX-TML8-1226-SM-32QON 40-49 years, female 21.6
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 21.6
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 21.2
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 20.9
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 20.8
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 20.8
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 20.4
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 20.1
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 20.0
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 19.3
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 19.1
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 19.1
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 19.1
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 18.7
GTEX-1122O-1226-SM-5H113 60-69 years, female 18.3
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 18.2
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 18.1
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 17.5
GTEX-WFON-1826-SM-3GILG 40-49 years, male 16.7
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 15.9
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 15.8
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 15.3
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 13.5
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 13.4
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 13.4
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 13.2
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 11.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

27.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 27.7
FF:10080-102A8 77 years, female 27.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.