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TRPC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.3TPM
GTEx:4.3RPKM
FANTOM5:13.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA021130

  

Antibody CAB009387

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 High   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

2.3
overview Male, age 54 Sample 1
TPM: 1.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.1
Samples: 149

Max RPKM: 13.3
Min RPKM: 2.0
Std RPKM: 1.9
Median RPKM: 5.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 13.3
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 11.5
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 10.5
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 9.8
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 9.8
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 9.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 9.7
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 9.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 9.4
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 9.3
Show all
Colon - Transverse
RPKM: 3.0
Samples: 196

Max RPKM: 12.3
Min RPKM: 0.3
Std RPKM: 2.4
Median RPKM: 2.0
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 12.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 10.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 10.1
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 9.2
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 8.5
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 8.5
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 8.4
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 8.0
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 7.9
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 7.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.8
FF:10014-101C5 62,83,84 years, mixed 13.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.