Tissue expression of SEMA6B - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	4.4	TPM
GTEx:	5.3	RPKM
FANTOM5:	12.0	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA055778	Antibody HPA058523	Antibody CAB025157
Glandular cells	Not detected	Not detected	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	4.4

Male, age 65

Sample 1
TPM: 3

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 3.9

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 5.5

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 5.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	5.3

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 5.3

Samples: 88

Max RPKM: 16.5
Min RPKM: 1.5
Std RPKM: 3.1
Median RPKM: 4.2

GTEX-XXEK-1026-SM-4BRUW

50-59 years, male

16.5

GTEX-WFG8-1626-SM-4LVMB

20-29 years, male

15.2

GTEX-148VJ-2226-SM-5NQ9M

70-79 years, male

13.8

GTEX-ZTPG-2626-SM-57WFX

20-29 years, female

13.8

GTEX-1192X-2526-SM-59868

50-59 years, male

13.0

GTEX-131XG-1726-SM-5LZUR

50-59 years, female

11.0

GTEX-13QBU-1926-SM-5IJEW

40-49 years, female

10.9

GTEX-13111-1426-SM-5DUW3

50-59 years, male

9.9

GTEX-111CU-1326-SM-5NQ8L

50-59 years, male

9.3

GTEX-133LE-1426-SM-5IFH1

20-29 years, female

9.0

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	12.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 12.0

FF:10024-101D6

15,40,85 years, mixed

12.0