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TMEM88

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.1TPM
GTEx:7.5RPKM
FANTOM5:19.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA052991

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

5.1
overview Male, age 54 Sample 1
TPM: 6.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 5.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.5
Samples: 149

Max RPKM: 22.3
Min RPKM: 2.0
Std RPKM: 3.2
Median RPKM: 8.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 22.3
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 20.5
GTEX-145LS-2926-SM-5O99G 60-69 years, female 17.5
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 17.1
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 16.4
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 15.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 15.6
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 15.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 14.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 14.5
Show all
Colon - Transverse
RPKM: 6.8
Samples: 196

Max RPKM: 43.2
Min RPKM: 1.8
Std RPKM: 4.7
Median RPKM: 5.6
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 43.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 25.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 23.6
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 23.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 22.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 22.0
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 19.8
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 17.9
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 17.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 17.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

19.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 19.3
FF:10014-101C5 62,83,84 years, mixed 19.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.