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CD47

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:73.1TPM
GTEx:11.2RPKM
FANTOM5:56.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA044659

  

Antibody CAB016055

  

Endothelial cells

 Not detected   Low  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

73.1
overview Male, age 54 Sample 1
TPM: 76.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 82.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 70.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 58.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 68.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 61.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 75.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 87.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 84.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 66.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 81
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 66.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 70.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 11.0
Samples: 149

Max RPKM: 18.3
Min RPKM: 6.3
Std RPKM: 2.4
Median RPKM: 10.9
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 18.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 17.8
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 17.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 16.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 16.1
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 15.3
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 15.3
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 15.0
GTEX-12696-1926-SM-5EGJT 60-69 years, male 14.8
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 14.6
Show all
Colon - Transverse
RPKM: 11.4
Samples: 196

Max RPKM: 18.2
Min RPKM: 6.7
Std RPKM: 2.2
Median RPKM: 11.2
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 18.2
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 16.6
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 16.4
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 16.2
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 15.9
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 15.7
GTEX-139T6-1326-SM-5IFFO 50-59 years, male 15.5
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 15.5
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 15.4
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 15.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

56.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 56.7
FF:10014-101C5 62,83,84 years, mixed 56.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.