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SMG5

ESOPHAGUS - Expression summary

RNA expression
HPA:26.7TPM
GTEx:26.1RPKM
FANTOM5:36.5Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

26.7
overview Female, age 70 Sample 1
TPM: 25.8
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 24.5
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 29.7
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

26.1

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 26.1
Samples: 286

Max RPKM: 53.6
Min RPKM: 13.1
Std RPKM: 5.0
Median RPKM: 25.6
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 53.6
GTEX-R55D-1126-SM-48FEB 50-59 years, male 40.4
GTEX-NPJ8-1926-SM-3MJGB 40-49 years, male 37.5
GTEX-R3RS-1326-SM-48FE7 40-49 years, female 37.4
GTEX-148VJ-1026-SM-5LU98 70-79 years, male 37.2
GTEX-UPK5-1226-SM-4IHL8 40-49 years, male 37.0
GTEX-X585-1226-SM-46MW7 50-59 years, male 36.9
GTEX-11DZ1-2026-SM-5A5KG 50-59 years, male 36.8
GTEX-144GO-2726-SM-5O9A2 60-69 years, male 36.6
GTEX-QEG4-0726-SM-4R1JL 30-39 years, male 36.6
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

36.5

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 36.5
FF:10015-101C6 68,74,75 years, mixed 36.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.