Fields »
ABOUT
HELP
BLOG
SMG5

SMALL INTESTINE - Expression summary

RNA expression
HPA:31.7TPM
GTEx:29.2RPKM
FANTOM5:62.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

31.7
overview Male, age 65 Sample 1
TPM: 27.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 34.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 32.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 32.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

29.2

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 29.2
Samples: 88

Max RPKM: 55.4
Min RPKM: 18.0
Std RPKM: 6.0
Median RPKM: 28.9
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 55.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 48.1
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 40.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 38.7
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 38.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 37.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 37.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 36.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 36.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 36.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

62.9

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 62.9
FF:10024-101D6 15,40,85 years, mixed 62.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.