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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

30.9 FPKM 23.6 FPKM

3-year survival high

0% 0%

3-year survival low

28% 36%

Log-rank P value

6.18e-2 8.69e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

25.5

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 66.1
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 58.8
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 58.3
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 57.0
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 56.9
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 56.6
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 55.8
TCGA-ER-A194-01A 77 years, male, white 48.5
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 45.9
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 45.4
TCGA-DA-A960-01A 73 years, male, white, stage:iib 37.3
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 36.3
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 35.5
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 35.5
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 34.2
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 33.9
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 33.8
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 33.3
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 32.9
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 32.5
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 31.6
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 31.5
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 30.3
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 30.2
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 30.1
TCGA-EB-A553-01A 62 years, male, white, stage:iic 29.9
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 29.9
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 29.1
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 28.8
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 28.4
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 28.3
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 28.0
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 27.9
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 27.8
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 27.8
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 27.8
TCGA-HR-A5NC-01A 90 years, female 27.6
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 27.3
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 26.7
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 26.7
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 26.4
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 26.1
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 25.9
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 25.8
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 25.4
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 24.9
TCGA-YG-AA3N-01A 67 years, male, stage:iic 24.6
TCGA-FR-A726-01A 90 years, male, white, stage:iic 24.0
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 24.0
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 23.9
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 23.6
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 23.5
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 23.4
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 23.1
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 23.0
TCGA-EB-A431-01A 34 years, male, white, stage:iic 22.5
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 22.5
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 21.6
TCGA-ER-A196-01A 64 years, female, white, stage:iic 21.2
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 21.1
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 20.9
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 20.8
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 20.3
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 19.8
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 19.6
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 19.4
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 19.4
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 19.4
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 19.3
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 18.9
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 18.7
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 17.9
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 17.9
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 17.5
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 17.5
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 17.3
TCGA-EB-A299-01A 63 years, male, white, stage:iia 16.7
TCGA-GN-A263-01A 24 years, male, white, stage:iv 16.6
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 16.6
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 16.1
TCGA-ER-A42H-01A 77 years, male, white 15.9
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 15.9
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 15.8
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 15.6
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 15.4
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 14.6
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 14.4
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 14.2
TCGA-EB-A550-01A 75 years, female, white, stage:iic 14.0
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 14.0
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 13.7
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 13.1
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 13.1
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 12.6
TCGA-EB-A24C-01A 56 years, male, white 12.5
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 12.5
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 11.6
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 11.1
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 11.0
TCGA-GF-A769-01A 39 years, male, white, stage:iic 10.2
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 9.6
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 8.7
Show all

MELANOMA - Protein expression

 

Antibody HPA045103

 Antibody staining
  High
  Medium
  Low
  Not detected
  
 Intensity
  Strong
  Moderate
  Weak
  Negative
  
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
  
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
  

Click images for details















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