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C8orf44-SGK3

COLON - Expression summary

RNA expression
HPA:0.1TPM
GTEx:0.1RPKM
FANTOM5:9.7Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA027146

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

0.1
overview Male, age 54 Sample 1
TPM: 0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 1.2
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.0
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 1.2
GTEX-145LS-2926-SM-5O99G 60-69 years, female 1.0
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 0.8
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 0.8
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 0.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 0.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 0.7
GTEX-XBED-1726-SM-47JYO 60-69 years, male 0.6
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 0.5
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 0.5
Show all
Colon - Transverse
RPKM: 0.1
Samples: 196

Max RPKM: 1.4
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.0
GTEX-S3XE-1126-SM-4AD4N 50-59 years, male 1.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 1.3
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 1.0
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 0.9
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 0.8
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 0.7
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 0.7
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 0.7
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 0.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 0.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

9.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 9.7
FF:10014-101C5 62,83,84 years, mixed 9.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.