Gene Gene synonym Ensembl Gene description Chromosome Position Protein class Evidence Antibody Reliability (IH) Reliability (Mouse Brain) Reliability (IF) Subcellular location Prognostic p-value RNA cancer category RNA tissue category RNA TS RNA TS TPM TPM max in non-specific CSRNP1 AXUD1, DKFZp566F164, FAM130B, TAIP-3, URAX1 ENSG00000144655 Cysteine-serine-rich nuclear protein 1 3 39141855-39154562 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA045207, HPA058463 Validated Nucleoplasm
Vesicles Renal cancer:1.07e-4 (favourable), Stomach cancer:6.47e-4 (unfavourable) Expressed in all Expressed in all bone marrow: 123.7 CSRNP2 C12ORF2, C12orf22, FAM130A1, PPP1R72, TAIP-12 ENSG00000110925 Cysteine-serine-rich nuclear protein 2 12 51061205-51083664 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA018503, HPA019914 Approved Approved Nuclear speckles Liver cancer:1.08e-4 (unfavourable), Urothelial cancer:2.78e-4 (favourable), Renal cancer:6.51e-4 (unfavourable) Expressed in all Expressed in all testis: 49.1 CSRNP3 FAM130A2, FLJ32093, PPP1R73, TAIP-2 ENSG00000178662 Cysteine-serine-rich nuclear protein 3 2 165469647-165689407 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA017905 Supported Approved Nucleus
Nucleoli Mixed Tissue enhanced cerebral cortex: 16.2 endometrium: 4.6 LRRFIP1 FLAP-1, FLIIAP1, GCF-2, HUFI-1, TRIP ENSG00000124831 Leucine rich repeat (in FLII) interacting protein 1 2 237627576-237813682 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level HPA006979 Approved Supported Cytosol Expressed in all Expressed in all parathyroid gland: 123.5 LRRFIP2 HUFI-2 ENSG00000093167 Leucine rich repeat (in FLII) interacting protein 2 3 37052656-37183689 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA035956, HPA042023 Uncertain Approved Plasma membrane
Actin filaments Cervical cancer:6.31e-4 (favourable) Expressed in all Expressed in all testis: 130.5 NFX1 MGC20369, NFX2, TEG-42, Tex42 ENSG00000086102 Nuclear transcription factor, X-box binding 1 9 33290511-33371157 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level HPA056310, HPA061382, HPA073519 Approved Validated Nucleus
Cytosol Ovarian cancer:3.75e-4 (favourable) Expressed in all Expressed in all thyroid gland: 41.6 NFXL1 HOZFP ENSG00000170448 Nuclear transcription factor, X-box binding-like 1 4 47847233-47914667 Predicted membrane proteins, Transcription factors Evidence at protein level HPA059132 Approved Approved Nucleoplasm Liver cancer:9.28e-4 (unfavourable) Expressed in all Mixed testis: 24.8 NONO NMT55, NRB54, P54, P54NRB, PPP1R114 ENSG00000147140 Non-POU domain containing, octamer-binding X 71283192-71301168 Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level CAB022069, HPA054094, HPA054559 Supported Validated Nucleoplasm Endometrial cancer:9.29e-4 (unfavourable) Expressed in all Expressed in all ovary: 245.1 NRF1 ALPHA-PAL, EWG ENSG00000106459 Nuclear respiratory factor 1 7 129611714-129757082 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA029329 Approved Supported Nucleoplasm
Cytosol Liver cancer:6.02e-4 (unfavourable) Expressed in all Expressed in all fallopian tube: 20.7 PHF5A bK223H9.2, INI, MGC1346, Rds3, SAP14b, SF3b14b, SF3B7 ENSG00000100410 PHD finger protein 5A 22 41459717-41468725 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA028885 Supported Validated Nucleoplasm Liver cancer:3.02e-8 (unfavourable) Expressed in all Expressed in all lymph node: 40.3 PSPC1 FLJ10955, PSP1 ENSG00000121390 Paraspeckle component 1 13 19674752-19783019 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA038904 Supported Approved Nucleoplasm
Nucleoli fibrillar center Thyroid cancer:1.46e-4 (favourable), Liver cancer:2.21e-4 (unfavourable) Expressed in all Expressed in all testis: 45.2 PURB PURBETA ENSG00000146676 Purine-rich element binding protein B 7 44876293-44885361 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA048766 Supported Nucleus Expressed in all Expressed in all cerebral cortex: 24.6 PURG PURG-A, PURG-B ENSG00000172733 Purine-rich element binding protein G 8 30995802-31033715 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA047746 Uncertain Approved Nucleus
Nucleoli
Plasma membrane Tissue enhanced Tissue enhanced cerebral cortex: 6.6;testis: 4.8 endometrium: 2.6 RFXANK ANKRA1, BLS, F14150_1, MGC138628, RFX-B ENSG00000064490 Regulatory factor X-associated ankyrin-containing protein 19 19192229-19201869 Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level HPA049157, HPA053330 Approved Validated Nucleoplasm Expressed in all Expressed in all fallopian tube: 49.7 RFXAP ENSG00000133111 Regulatory factor X-associated protein 13 36819224-36829104 Disease related genes, Predicted intracellular proteins, Transcription factors Evidence at protein level HPA032035 Approved Nuclear speckles Lung cancer:2.26e-5 (favourable), Pancreatic cancer:4.18e-4 (favourable), Stomach cancer:4.91e-4 (favourable) Expressed in all Mixed testis: 12.1 SFPQ PPP1R140, PSF ENSG00000116560 Splicing factor proline/glutamine-rich 1 35176378-35193148 Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level CAB009886, HPA047513, HPA054689 Supported Validated Nucleoplasm Liver cancer:7.91e-13 (unfavourable), Breast cancer:9.56e-5 (favourable) Expressed in all Expressed in all bone marrow: 135.7 TCF25 KIAA1049, Nulp1 ENSG00000141002 Transcription factor 25 (basic helix-loop-helix) 16 89873586-89911384 Predicted intracellular proteins, Transcription factors Evidence at protein level HPA041699, HPA041786 Uncertain Endometrial cancer:6.95e-4 (favourable) Expressed in all Expressed in all cerebral cortex: 124.9 ZNFX1 FLJ11277, KIAA1404 ENSG00000124201 Zinc finger, NFX1-type containing 1 20 49237946-49278426 Plasma proteins, Predicted intracellular proteins, Transcription factors Evidence at protein level HPA046629 Approved Approved Mitochondria Expressed in all Expressed in all lung: 27.1