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TISSUE ATLAS OVARY

GENE/PROTEIN

Dictionary

Ovary

Tissue proteome

Ovary

OVARY - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:1.2TPM
GTEx:2.5RPKM
FANTOM5:4.4Tags Per Million

OVARY - Annotated protein expression

Pending normal tissue analysis


OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

1.2

overview Female, age 64 Sample 1
TPM: 2.1
Cell types%
Stromal cells: 70
Smooth muscle cells: 15
Other cell types: 15
overview Female, age 52 Sample 2
TPM: 0.5
Cell types%
Stromal cells: 95
Other cell types: 5
overview Female, age 80 Sample 3
TPM: 1.2
Cell types%
Stromal cells: 70
Smooth muscle cells: 25
Other cell types: 5

OVARY - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

2.5

GTEx sample id

Sample description

RPKM

Ovary
RPKM: 2.5
Samples: 97

Max RPKM: 9.6
Min RPKM: 0.1
Std RPKM: 1.6
Median RPKM: 2.2
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 9.6
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 5.9
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 5.8
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 5.7
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 5.5
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 5.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 5.1
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 5.0
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 4.9
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 4.9
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 4.9
GTEX-RU72-2226-SM-46MUE 50-59 years, female 4.5
GTEX-QVJO-3126-SM-4R1KC 60-69 years, female 4.3
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 4.3
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 4.1
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 4.0
GTEX-Q734-0726-SM-48TZP 40-49 years, female 4.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 4.0
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 4.0
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 4.0
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 3.9
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 3.9
GTEX-S341-0726-SM-4AD5R 40-49 years, female 3.7
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 3.6
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 3.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 3.4
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 3.3
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 3.3
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 3.2
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3.1
GTEX-P78B-1926-SM-3P616 40-49 years, female 3.1
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 3.1
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 3.0
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2.9
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 2.8
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 2.8
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 2.8
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2.8
GTEX-ZYWO-1926-SM-5E456 40-49 years, female 2.8
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 2.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 2.7
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 2.6
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 2.5
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 2.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 2.4
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2.4
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2.2
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 2.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2.1
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 2.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2.1
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2.1
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2.0
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 2.0
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 2.0
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 1.9
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1.8
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 1.7
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 1.7
GTEX-12WSB-2226-SM-5GCOS 60-69 years, female 1.7
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 1.7
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 1.7
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 1.7
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 1.7
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 1.6
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 1.6
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 1.6
GTEX-QCQG-1426-SM-48U22 50-59 years, female 1.4
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 1.4
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 1.3
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 1.2
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 1.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 1.2
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 1.1
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 1.1
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 1.0
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 0.9
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 0.8
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 0.8
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 0.7
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 0.7
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 0.6
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 0.6
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 0.5
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 0.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 0.4
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 0.4
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 0.4
GTEX-11I78-1926-SM-59878 50-59 years, female 0.3
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 0.3
GTEX-XUJ4-1326-SM-4BOQ9 60-69 years, female 0.3
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 0.3
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 0.2
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 0.2
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 0.2
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 0.1
Show all

OVARY - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

4.4

FANTOM5 sample id

Sample description

Tags Per Million

Ovary
Tags Per Million: 4.4
FF:10020-101D2 47,75,84 years, female 4.4

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