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TISSUE ATLAS PRIMARY DATA PANCREAS

GENE/PROTEIN

Antibody validation


Dictionary

Pancreas

Tissue proteome

Pancreas

PANCREAS - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:2.8TPM
GTEx:17.7RPKM
FANTOM5:60.2Tags Per Million

PANCREAS - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Exocrine glandular cells:Low
Islets of Langerhans:Not detected
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA002911

 

Exocrine glandular cells

Low  

Islets of Langerhans

Not detected  
 
 
 

PANCREAS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

2.8

overview Female, age 59 Sample 1
TPM: 2.4
Cell types%
Exocrine glandular cells: 75
Islets of Langerhans: 10
Ductal cells: 5
Other cell types: 10
overview Male, age 60 Sample 2
TPM: 3.2
Cell types%
Exocrine glandular cells: 90
Islets of Langerhans: 5
Ductal cells: 5

PANCREAS - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

17.7

GTEx sample id

Sample description

RPKM

Pancreas
RPKM: 17.7
Samples: 171

Max RPKM: 100.2
Min RPKM: 0.7
Std RPKM: 16.2
Median RPKM: 13.8
GTEX-13X6H-0626-SM-5LU53 50-59 years, female 100.2
GTEX-13U4I-1526-SM-5IFFF 40-49 years, female 90.3
GTEX-Q2AI-0426-SM-48U13 40-49 years, male 78.7
GTEX-ZYW4-2126-SM-59HJ9 60-69 years, male 64.6
GTEX-111CU-0526-SM-5EGHK 50-59 years, male 56.7
GTEX-131XE-1926-SM-5IFER 50-59 years, male 54.2
GTEX-P4PQ-1026-SM-3NMCN 60-69 years, male 53.2
GTEX-ZV7C-0726-SM-59HKH 50-59 years, male 52.8
GTEX-S3XE-0526-SM-4AD4G 50-59 years, male 51.0
GTEX-Y8LW-1026-SM-5IFJY 50-59 years, female 46.8
GTEX-13W3W-1026-SM-5IFG4 60-69 years, female 46.0
GTEX-ZP4G-0426-SM-4YCER 20-29 years, female 45.0
GTEX-11EQ9-1026-SM-5H134 30-39 years, male 41.6
GTEX-132QS-0926-SM-5P9GB 60-69 years, male 41.6
GTEX-13VXT-1226-SM-5LU3M 20-29 years, female 41.4
GTEX-144GN-0826-SM-5LU5G 50-59 years, male 41.3
GTEX-1399S-0326-SM-5IFFS 30-39 years, female 37.7
GTEX-13CF3-1026-SM-5LZWY 60-69 years, female 37.2
GTEX-1122O-0726-SM-5GIEV 60-69 years, female 36.9
GTEX-13D11-2226-SM-5IFEO 50-59 years, female 34.9
GTEX-WFJO-0626-SM-4LVMC 30-39 years, male 34.7
GTEX-ZYFG-0826-SM-5BC5T 60-69 years, female 34.3
GTEX-OHPL-1026-SM-3MJGI 60-69 years, female 31.8
GTEX-ZG7Y-0326-SM-4WWEY 50-59 years, male 31.4
GTEX-Y5V5-1026-SM-5LUAH 60-69 years, female 30.0
GTEX-UJHI-0626-SM-3DB8T 50-59 years, female 29.3
GTEX-VJYA-0826-SM-4KL1M 60-69 years, male 29.1
GTEX-1497J-0426-SM-5Q5CO 60-69 years, male 28.9
GTEX-NPJ8-2126-SM-3MJGK 40-49 years, male 28.3
GTEX-WFON-0626-SM-4LVLX 40-49 years, male 28.0
GTEX-132AR-1826-SM-5EGHR 50-59 years, female 27.7
GTEX-WFG7-0426-SM-4LMK5 20-29 years, male 27.2
GTEX-RWS6-1126-SM-47JXC 60-69 years, female 26.8
GTEX-RM2N-0326-SM-48FD8 50-59 years, male 26.4
GTEX-1399U-0926-SM-5IFHA 50-59 years, female 26.2
GTEX-ZLWG-0326-SM-4WWC7 50-59 years, female 26.2
GTEX-PSDG-1526-SM-48TCY 50-59 years, male 26.1
GTEX-YEC3-0626-SM-5IFHZ 50-59 years, male 25.9
GTEX-11LCK-0226-SM-5A5M6 30-39 years, male 25.3
GTEX-U4B1-0726-SM-4DXUA 40-49 years, male 25.2
GTEX-13YAN-2126-SM-5Q5C4 60-69 years, male 24.3
GTEX-OOBK-1026-SM-48TC2 40-49 years, male 24.2
GTEX-WH7G-0826-SM-4LVMR 40-49 years, male 24.1
GTEX-ZYWO-1326-SM-5SI8X 40-49 years, female 24.1
GTEX-QDVJ-1226-SM-48U1V 50-59 years, male 23.9
GTEX-11TT1-0326-SM-5LUAY 20-29 years, male 23.5
GTEX-TMMY-1326-SM-4DXU9 40-49 years, female 22.7
GTEX-O5YT-1026-SM-3MJGF 20-29 years, male 22.6
GTEX-13O61-2126-SM-5IJEO 60-69 years, male 22.5
GTEX-XYKS-1226-SM-4BRVI 60-69 years, female 21.7
GTEX-Y114-0826-SM-4TT77 50-59 years, female 21.2
GTEX-SIU7-0926-SM-4BRX1 50-59 years, male 20.8
GTEX-YB5E-0526-SM-4VDSD 40-49 years, male 20.7
GTEX-WFG8-0326-SM-4LVN4 20-29 years, male 20.2
GTEX-11VI4-0426-SM-5EGHZ 40-49 years, female 19.9
GTEX-13N11-0226-SM-5KM3C 50-59 years, female 19.7
GTEX-XXEK-1726-SM-4BRVB 50-59 years, male 19.7
GTEX-YFCO-1026-SM-5LU9S 40-49 years, male 19.6
GTEX-12WSN-0826-SM-5GCOF 40-49 years, male 19.3
GTEX-X5EB-0526-SM-46MVP 40-49 years, male 19.2
GTEX-SNOS-0926-SM-4DM7A 40-49 years, male 18.8
GTEX-13FH7-1426-SM-5IFIC 50-59 years, female 18.2
GTEX-UPIC-0726-SM-3GADW 20-29 years, female 18.1
GTEX-T8EM-0826-SM-4DM76 40-49 years, male 17.5
GTEX-S4P3-0626-SM-4AD59 50-59 years, female 17.4
GTEX-12BJ1-1126-SM-5EGGG 60-69 years, male 17.2
GTEX-131XF-1426-SM-5BC68 60-69 years, male 17.0
GTEX-XUW1-1726-SM-4BOOZ 50-59 years, female 17.0
GTEX-PX3G-1026-SM-48TZW 20-29 years, female 16.9
GTEX-XV7Q-0926-SM-4BRVQ 40-49 years, female 16.7
GTEX-12WSK-0226-SM-5BC62 40-49 years, female 16.5
GTEX-11P7K-0526-SM-5BC5I 30-39 years, male 16.3
GTEX-S33H-1226-SM-4AD69 30-39 years, male 16.2
GTEX-QCQG-0426-SM-48U29 50-59 years, female 16.1
GTEX-Y3I4-0826-SM-4TT2A 50-59 years, male 15.6
GTEX-131XG-1426-SM-5GCMO 50-59 years, female 15.5
GTEX-11NSD-0526-SM-5A5LT 20-29 years, male 15.3
GTEX-144FL-1526-SM-5Q5CA 50-59 years, male 15.3
GTEX-ZVP2-0726-SM-59HKY 50-59 years, male 15.3
GTEX-XBED-0226-SM-47JY8 60-69 years, male 15.1
GTEX-S32W-0826-SM-4AD5Z 50-59 years, female 15.0
GTEX-14E6E-1426-SM-5RQI2 30-39 years, male 14.8
GTEX-11I78-0626-SM-5A5LZ 50-59 years, female 14.4
GTEX-ZPU1-0226-SM-4WWC9 40-49 years, male 14.3
GTEX-PW2O-0826-SM-48TC5 20-29 years, male 14.0
GTEX-ZPIC-0926-SM-4WWFK 40-49 years, female 13.8
GTEX-OHPM-1026-SM-3LK74 50-59 years, male 13.4
GTEX-14AS3-0326-SM-5Q5DB 40-49 years, female 12.8
GTEX-ZZPU-0726-SM-5N9C8 50-59 years, female 12.2
GTEX-ZLFU-0726-SM-57WF6 40-49 years, male 12.1
GTEX-Y5LM-0526-SM-4V6G3 40-49 years, female 12.0
GTEX-145MN-1426-SM-5SI9H 30-39 years, male 11.9
GTEX-145MO-2126-SM-5Q5CZ 60-69 years, male 11.9
GTEX-11ONC-0526-SM-5BC57 60-69 years, male 11.7
GTEX-1211K-1126-SM-5EGGB 60-69 years, female 11.5
GTEX-UJMC-1126-SM-3GADP 50-59 years, male 11.5
GTEX-P4QS-1026-SM-3NMCW 60-69 years, male 11.4
GTEX-R53T-0426-SM-48FEM 50-59 years, female 11.0
GTEX-QDVN-0926-SM-2I5GL 50-59 years, male 10.2
GTEX-TML8-0526-SM-32QOQ 40-49 years, female 10.2
GTEX-13OVI-0526-SM-5IFFQ 60-69 years, female 10.1
GTEX-145ME-0326-SM-5S2QO 40-49 years, female 10.0
GTEX-W5WG-0826-SM-4RGNE 50-59 years, female 9.5
GTEX-11XUK-0626-SM-5N9ES 40-49 years, female 9.3
GTEX-146FR-0126-SM-5Q5F3 60-69 years, female 9.3
GTEX-PLZ6-0726-SM-3P619 30-39 years, male 9.3
GTEX-WHWD-0726-SM-4OORX 50-59 years, male 9.2
GTEX-13O1R-1826-SM-5KM3B 60-69 years, male 9.1
GTEX-S95S-0726-SM-4B64H 60-69 years, male 9.0
GTEX-1399R-0426-SM-5IJE3 30-39 years, male 8.7
GTEX-Y9LG-0726-SM-4VDS3 30-39 years, male 8.6
GTEX-14ICL-1126-SM-5S2RE 30-39 years, male 8.5
GTEX-SE5C-0326-SM-4BRWX 40-49 years, female 8.4
GTEX-WI4N-1826-SM-4OOSF 40-49 years, female 8.4
GTEX-R55G-0326-SM-48FDM 40-49 years, female 8.2
GTEX-T5JW-0226-SM-4DM7I 20-29 years, female 8.2
GTEX-13FTW-0526-SM-5IFIP 40-49 years, male 8.0
GTEX-TKQ2-0426-SM-4DXUO 50-59 years, male 8.0
GTEX-V955-0326-SM-4JBGV 60-69 years, male 7.9
GTEX-XGQ4-0226-SM-4GIDS 50-59 years, male 7.7
GTEX-YB5K-1826-SM-5IFJC 40-49 years, female 7.7
GTEX-YEC4-1326-SM-5IFHG 40-49 years, male 7.7
GTEX-QLQ7-0626-SM-4R1JT 60-69 years, male 7.4
GTEX-X4LF-0326-SM-4QAS9 50-59 years, male 7.4
GTEX-ZT9W-0926-SM-57WFS 50-59 years, male 7.4
GTEX-XMK1-0326-SM-4B652 40-49 years, male 7.0
GTEX-13PL7-2226-SM-5L3IC 60-69 years, female 6.9
GTEX-R55D-1426-SM-48FEN 50-59 years, male 6.7
GTEX-XPVG-0326-SM-4B653 50-59 years, male 6.7
GTEX-WRHK-0226-SM-4MVOH 20-29 years, female 6.6
GTEX-PWOO-0626-SM-48TZH 40-49 years, female 6.5
GTEX-ZAB5-0826-SM-5P9FU 50-59 years, male 6.2
GTEX-Q734-0426-SM-48TZX 40-49 years, female 6.1
GTEX-Y8E4-1326-SM-5IFIY 40-49 years, male 6.1
GTEX-13FLV-0626-SM-5IFEY 50-59 years, male 5.9
GTEX-146FQ-1526-SM-5Q5CX 30-39 years, male 5.9
GTEX-111YS-1226-SM-5EGGJ 60-69 years, male 5.4
GTEX-XBEW-1626-SM-4SOJP 40-49 years, male 5.4
GTEX-139YR-1526-SM-5IFJ1 50-59 years, male 5.3
GTEX-OOBJ-1026-SM-3NB2L 60-69 years, male 5.3
GTEX-ZYY3-0826-SM-5E44R 60-69 years, female 5.1
GTEX-Y3IK-0426-SM-4WWE2 50-59 years, female 5.0
GTEX-QEL4-1326-SM-447AD 50-59 years, male 4.9
GTEX-WYVS-0926-SM-4SOJV 40-49 years, female 4.5
GTEX-12WSL-0426-SM-5GCNX 50-59 years, male 4.2
GTEX-V1D1-0726-SM-4JBH7 50-59 years, male 4.0
GTEX-X3Y1-0726-SM-3P5YU 40-49 years, male 3.9
GTEX-1339X-1026-SM-5IFH5 40-49 years, male 3.8
GTEX-YF7O-1326-SM-4W1ZR 50-59 years, male 3.8
GTEX-ZTPG-1026-SM-5DUWP 20-29 years, female 3.8
GTEX-ZC5H-0826-SM-5N9FH 40-49 years, female 3.7
GTEX-117YX-0226-SM-5EGH6 50-59 years, male 3.6
GTEX-QV31-0226-SM-447BO 30-39 years, male 3.5
GTEX-13FTX-1226-SM-5IFGN 20-29 years, female 3.4
GTEX-P4PP-1026-SM-3NM9O 30-39 years, female 3.4
GTEX-SUCS-1426-SM-4DM5W 70-79 years, male 3.3
GTEX-NFK9-1626-SM-3LK5J 40-49 years, male 3.2
GTEX-WQUQ-2126-SM-4OOSO 60-69 years, male 3.1
GTEX-ZVZP-0626-SM-59HL5 50-59 years, male 2.9
GTEX-XQ8I-1926-SM-4BOOK 50-59 years, male 2.8
GTEX-Q2AH-0926-SM-48TZK 40-49 years, male 2.5
GTEX-X15G-0726-SM-4PQZ5 50-59 years, female 2.4
GTEX-ZVT2-2026-SM-5NQ8Q 50-59 years, female 2.2
GTEX-ZF3C-2026-SM-4WWB5 50-59 years, female 1.9
GTEX-11DXX-0926-SM-5H112 60-69 years, female 1.6
GTEX-12WSG-1026-SM-5EGII 50-59 years, female 1.6
GTEX-QLQW-0326-SM-447A8 30-39 years, male 1.5
GTEX-QV44-0426-SM-4R1KF 50-59 years, male 1.4
GTEX-QMRM-0326-SM-4R1K5 50-59 years, male 1.0
GTEX-1128S-0826-SM-5GZZI 60-69 years, female 0.8
GTEX-ZAB4-1726-SM-5HL8C 40-49 years, male 0.7
Show all

PANCREAS - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

60.2

FANTOM5 sample id

Sample description

Tags Per Million

Pancreas
Tags Per Million: 60.2
FF:10049-101G4 52 years, male 60.2

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