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TISSUE ATLAS PROSTATE

GENE/PROTEIN

Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:11.5TPM
GTEx:21.1RPKM
FANTOM5:31.8Tags Per Million

PROSTATE - Annotated protein expression

Pending normal tissue analysis


PROSTATE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

11.5

overview Male, age 62 Sample 1
TPM: 30.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65 Sample 2
TPM: 16.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65 Sample 3
TPM: 22.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68 Sample 4
TPM: 12.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60 Sample 5
TPM: 8.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66 Sample 6
TPM: 6.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63 Sample 7
TPM: 9
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66 Sample 8
TPM: 6
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58 Sample 9
TPM: 6.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

21.1

GTEx sample id

Sample description

RPKM

Prostate
RPKM: 21.1
Samples: 106

Max RPKM: 43.3
Min RPKM: 7.3
Std RPKM: 7.1
Median RPKM: 19.9
GTEX-144GM-0826-SM-5O98R 20-29 years, male 43.3
GTEX-11WQK-2726-SM-5EQMU 50-59 years, male 37.7
GTEX-WFG8-1826-SM-4LVM4 20-29 years, male 36.4
GTEX-YJ8A-1126-SM-5IFJU 20-29 years, male 35.7
GTEX-OOBK-2025-SM-3LK5S 40-49 years, male 34.4
GTEX-WK11-2626-SM-4OOSK 50-59 years, male 34.0
GTEX-QMRM-1426-SM-4R1K8 50-59 years, male 33.7
GTEX-S33H-1826-SM-4AD65 30-39 years, male 32.6
GTEX-111CU-1526-SM-5N9FS 50-59 years, male 32.5
GTEX-U412-2026-SM-4DXSI 60-69 years, male 32.1
GTEX-NPJ8-2426-SM-3MJHL 40-49 years, male 30.7
GTEX-U8XE-2526-SM-4E3IT 30-39 years, male 30.7
GTEX-12696-2226-SM-5EQ65 60-69 years, male 30.5
GTEX-11OF3-1726-SM-5GU5Q 60-69 years, male 29.6
GTEX-RM2N-1126-SM-48FCY 50-59 years, male 29.6
GTEX-ZPU1-2026-SM-57WFI 40-49 years, male 29.5
GTEX-ZTTD-2726-SM-57WFA 50-59 years, male 28.7
GTEX-ZTX8-1026-SM-5EGHD 20-29 years, male 28.7
GTEX-XPVG-2026-SM-4B65E 50-59 years, male 28.0
GTEX-T8EM-1826-SM-4DM7F 40-49 years, male 27.4
GTEX-145LV-1226-SM-5S2QH 50-59 years, male 27.2
GTEX-12ZZZ-2026-SM-5LZWJ 60-69 years, male 26.4
GTEX-XAJ8-0626-SM-47JY4 40-49 years, male 26.4
GTEX-XOTO-2826-SM-4B65I 50-59 years, male 26.4
GTEX-148VJ-1826-SM-5Q5DV 70-79 years, male 26.2
GTEX-11TUW-2126-SM-5GU7B 60-69 years, male 25.1
GTEX-13FHO-2826-SM-5K7ZA 60-69 years, male 24.9
GTEX-QLQ7-1326-SM-4R1JY 60-69 years, male 24.9
GTEX-13N2G-1826-SM-5KM1I 60-69 years, male 24.7
GTEX-QEG4-2226-SM-4R1JM 30-39 years, male 24.7
GTEX-11NSD-0826-SM-5986S 20-29 years, male 24.6
GTEX-1399T-1226-SM-5P9J5 60-69 years, male 24.4
GTEX-ZY6K-1526-SM-5GZXE 50-59 years, male 24.4
GTEX-139T6-1526-SM-5P9G6 50-59 years, male 24.1
GTEX-13G51-2326-SM-5LZXV 60-69 years, male 23.9
GTEX-11O72-2726-SM-5HL6K 40-49 years, male 23.8
GTEX-13O61-1726-SM-5KM46 60-69 years, male 23.8
GTEX-OIZH-2026-SM-3NB1M 50-59 years, male 23.8
GTEX-UTHO-2726-SM-4JBH9 60-69 years, male 23.5
GTEX-S95S-1026-SM-4B64M 60-69 years, male 23.1
GTEX-11DYG-2526-SM-5N9BB 60-69 years, male 22.6
GTEX-Y8E4-2126-SM-5RQHO 40-49 years, male 22.6
GTEX-13O21-1126-SM-5N9EV 50-59 years, male 22.4
GTEX-WFON-1626-SM-4LVMV 40-49 years, male 22.1
GTEX-111YS-1726-SM-5GIED 60-69 years, male 21.7
GTEX-13OW8-0426-SM-5J2NR 60-69 years, male 21.5
GTEX-S3XE-1326-SM-4AD4H 50-59 years, male 21.5
GTEX-U4B1-1426-SM-4DXTX 40-49 years, male 21.2
GTEX-11TT1-2026-SM-5EQM8 20-29 years, male 21.0
GTEX-REY6-2126-SM-48FD9 60-69 years, male 20.9
GTEX-14C5O-2826-SM-5RQI6 60-69 years, male 20.7
GTEX-14BMV-2326-SM-5RQJ4 50-59 years, male 20.1
GTEX-13RTJ-2126-SM-5S2PZ 60-69 years, male 20.0
GTEX-13111-1326-SM-5GCNO 50-59 years, male 19.8
GTEX-14E6E-1126-SM-5S2R4 30-39 years, male 19.7
GTEX-145LT-0626-SM-5O99E 40-49 years, male 19.6
GTEX-XGQ4-1826-SM-4AT6F 50-59 years, male 19.6
GTEX-RWSA-2026-SM-47JX8 40-49 years, male 19.4
GTEX-132QS-1126-SM-5P9GC 60-69 years, male 19.3
GTEX-V955-1826-SM-4JBIL 60-69 years, male 19.2
GTEX-13FXS-2826-SM-5LZYC 50-59 years, male 19.1
GTEX-12BJ1-1226-SM-5LUAE 60-69 years, male 18.6
GTEX-117YW-1426-SM-5EGGO 50-59 years, male 18.2
GTEX-132NY-2826-SM-5P9G2 60-69 years, male 18.2
GTEX-14ABY-0726-SM-5Q5DF 50-59 years, male 18.2
GTEX-Q2AI-1126-SM-48U19 40-49 years, male 18.1
GTEX-ZLFU-1726-SM-4WWBU 40-49 years, male 18.0
GTEX-111FC-2026-SM-5GZYO 60-69 years, male 17.9
GTEX-YF7O-1926-SM-4W1YQ 50-59 years, male 17.9
GTEX-117YX-1526-SM-5H12T 50-59 years, male 17.8
GTEX-131XF-1926-SM-5DUW4 60-69 years, male 17.1
GTEX-SJXC-2026-SM-4DM6N 60-69 years, male 16.6
GTEX-WH7G-1726-SM-4LVKY 40-49 years, male 16.6
GTEX-WFG7-1826-SM-3GIL1 20-29 years, male 16.5
GTEX-11ZUS-2126-SM-5N9E6 30-39 years, male 16.3
GTEX-146FQ-1726-SM-5QGPX 30-39 years, male 16.3
GTEX-13NYS-1026-SM-5KLZT 60-69 years, male 16.1
GTEX-XQ3S-2526-SM-4BOOG 20-29 years, male 16.1
GTEX-XMK1-1026-SM-4B65H 40-49 years, male 16.0
GTEX-VJYA-1226-SM-3GIJ6 60-69 years, male 15.9
GTEX-11EQ9-1726-SM-5HL6U 30-39 years, male 15.7
GTEX-ZDYS-1226-SM-5IJF3 50-59 years, male 15.5
GTEX-QV44-1526-SM-4R1KI 50-59 years, male 15.4
GTEX-S4Q7-1026-SM-4AD75 20-29 years, male 15.3
GTEX-SNMC-0926-SM-4DM5U 20-29 years, male 15.3
GTEX-13FTW-1226-SM-5LZZ1 40-49 years, male 15.2
GTEX-SNOS-1026-SM-4DM4Y 40-49 years, male 15.2
GTEX-WZTO-0926-SM-4PQZ3 40-49 years, male 15.2
GTEX-ZZ64-0926-SM-5E44L 20-29 years, male 15.2
GTEX-X5EB-1826-SM-4E3K8 40-49 years, male 14.9
GTEX-OOBJ-2026-SM-3NB1R 60-69 years, male 14.8
GTEX-V1D1-1926-SM-4JBGX 50-59 years, male 13.8
GTEX-1399R-0526-SM-5IJEF 30-39 years, male 13.5
GTEX-ZT9W-1626-SM-4YCDQ 50-59 years, male 13.3
GTEX-12C56-1326-SM-5FQSV 20-29 years, male 12.7
GTEX-YB5E-1826-SM-5IFI4 40-49 years, male 12.1
GTEX-11P7K-0626-SM-5985Z 30-39 years, male 11.9
GTEX-ZVP2-0826-SM-59HJ6 50-59 years, male 11.8
GTEX-QV31-1026-SM-4R1K3 30-39 years, male 11.2
GTEX-WOFM-0326-SM-4OOSL 20-29 years, male 10.6
GTEX-11P82-1126-SM-5BC5K 20-29 years, male 10.5
GTEX-NFK9-2226-SM-3MJGP 40-49 years, male 9.6
GTEX-PLZ6-1126-SM-3P5ZR 30-39 years, male 9.5
GTEX-U3ZM-0926-SM-4DXSW 40-49 years, male 9.5
GTEX-Y9LG-1826-SM-4VBQC 30-39 years, male 8.8
GTEX-ZUA1-2826-SM-59HLE 40-49 years, male 7.3
Show all

PROSTATE - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

31.8

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 31.8
FF:10022-101D4 73,79,93 years, male 31.8

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The Human Protein Atlas project is funded
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