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TISSUE ATLAS PRIMARY DATA PANCREAS

GENE/PROTEIN

Antibody validation


Dictionary

Pancreas

Tissue proteome

Pancreas

PANCREAS - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:140.4TPM
GTEx:134.3RPKM
FANTOM5:476.9Tags Per Million

PANCREAS - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Exocrine glandular cells:High
Islets of Langerhans:Not detected
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody CAB018702

 

Antibody CAB069993

 

Exocrine glandular cells

High   High  

Islets of Langerhans

Not detected   Medium  
   
   
   

PANCREAS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

140.4

overview Female, age 59 Sample 1
TPM: 167.1
Cell types%
Exocrine glandular cells: 75
Islets of Langerhans: 10
Ductal cells: 5
Other cell types: 10
overview Male, age 60 Sample 2
TPM: 113.7
Cell types%
Exocrine glandular cells: 90
Islets of Langerhans: 5
Ductal cells: 5

PANCREAS - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

134.3

GTEx sample id

Sample description

RPKM

Pancreas
RPKM: 134.3
Samples: 171

Max RPKM: 271.6
Min RPKM: 54.9
Std RPKM: 44.2
Median RPKM: 127.1
GTEX-13CF3-1026-SM-5LZWY 60-69 years, female 271.6
GTEX-ZF3C-2026-SM-4WWB5 50-59 years, female 263.7
GTEX-14E6E-1426-SM-5RQI2 30-39 years, male 258.5
GTEX-XBED-0226-SM-47JY8 60-69 years, male 249.8
GTEX-S32W-0826-SM-4AD5Z 50-59 years, female 232.6
GTEX-Q2AH-0926-SM-48TZK 40-49 years, male 228.2
GTEX-13PL7-2226-SM-5L3IC 60-69 years, female 226.8
GTEX-QDVN-0926-SM-2I5GL 50-59 years, male 223.5
GTEX-132QS-0926-SM-5P9GB 60-69 years, male 219.8
GTEX-1128S-0826-SM-5GZZI 60-69 years, female 219.3
GTEX-XYKS-1226-SM-4BRVI 60-69 years, female 217.5
GTEX-OOBK-1026-SM-48TC2 40-49 years, male 216.6
GTEX-PWOO-0626-SM-48TZH 40-49 years, female 208.3
GTEX-XV7Q-0926-SM-4BRVQ 40-49 years, female 205.5
GTEX-QDVJ-1226-SM-48U1V 50-59 years, male 201.5
GTEX-139YR-1526-SM-5IFJ1 50-59 years, male 199.8
GTEX-144GN-0826-SM-5LU5G 50-59 years, male 199.7
GTEX-QCQG-0426-SM-48U29 50-59 years, female 199.7
GTEX-12WSL-0426-SM-5GCNX 50-59 years, male 196.5
GTEX-12WSK-0226-SM-5BC62 40-49 years, female 192.5
GTEX-Y8LW-1026-SM-5IFJY 50-59 years, female 190.9
GTEX-T5JW-0226-SM-4DM7I 20-29 years, female 190.2
GTEX-144FL-1526-SM-5Q5CA 50-59 years, male 184.6
GTEX-Y9LG-0726-SM-4VDS3 30-39 years, male 181.0
GTEX-OHPM-1026-SM-3LK74 50-59 years, male 179.2
GTEX-11TT1-0326-SM-5LUAY 20-29 years, male 179.1
GTEX-OHPL-1026-SM-3MJGI 60-69 years, female 179.1
GTEX-WFON-0626-SM-4LVLX 40-49 years, male 179.1
GTEX-X5EB-0526-SM-46MVP 40-49 years, male 177.9
GTEX-PSDG-1526-SM-48TCY 50-59 years, male 177.8
GTEX-12WSN-0826-SM-5GCOF 40-49 years, male 174.6
GTEX-1211K-1126-SM-5EGGB 60-69 years, female 172.1
GTEX-Y5LM-0526-SM-4V6G3 40-49 years, female 168.2
GTEX-R53T-0426-SM-48FEM 50-59 years, female 168.1
GTEX-WFJO-0626-SM-4LVMC 30-39 years, male 166.7
GTEX-Y114-0826-SM-4TT77 50-59 years, female 165.5
GTEX-O5YT-1026-SM-3MJGF 20-29 years, male 164.9
GTEX-13X6H-0626-SM-5LU53 50-59 years, female 164.3
GTEX-11LCK-0226-SM-5A5M6 30-39 years, male 164.1
GTEX-SIU7-0926-SM-4BRX1 50-59 years, male 162.8
GTEX-S4P3-0626-SM-4AD59 50-59 years, female 162.5
GTEX-14ICL-1126-SM-5S2RE 30-39 years, male 161.9
GTEX-13FTX-1226-SM-5IFGN 20-29 years, female 160.3
GTEX-117YX-0226-SM-5EGH6 50-59 years, male 159.6
GTEX-WFG8-0326-SM-4LVN4 20-29 years, male 159.1
GTEX-145MN-1426-SM-5SI9H 30-39 years, male 158.4
GTEX-XPVG-0326-SM-4B653 50-59 years, male 156.1
GTEX-1497J-0426-SM-5Q5CO 60-69 years, male 155.6
GTEX-ZVZP-0626-SM-59HL5 50-59 years, male 155.3
GTEX-13FH7-1426-SM-5IFIC 50-59 years, female 155.1
GTEX-P4PQ-1026-SM-3NMCN 60-69 years, male 154.3
GTEX-QLQ7-0626-SM-4R1JT 60-69 years, male 153.8
GTEX-ZLWG-0326-SM-4WWC7 50-59 years, female 150.9
GTEX-ZV7C-0726-SM-59HKH 50-59 years, male 148.9
GTEX-ZP4G-0426-SM-4YCER 20-29 years, female 147.4
GTEX-VJYA-0826-SM-4KL1M 60-69 years, male 147.1
GTEX-X4LF-0326-SM-4QAS9 50-59 years, male 146.5
GTEX-P4QS-1026-SM-3NMCW 60-69 years, male 146.0
GTEX-WFG7-0426-SM-4LMK5 20-29 years, male 145.9
GTEX-13VXT-1226-SM-5LU3M 20-29 years, female 145.3
GTEX-13N11-0226-SM-5KM3C 50-59 years, female 144.8
GTEX-PW2O-0826-SM-48TC5 20-29 years, male 144.7
GTEX-ZG7Y-0326-SM-4WWEY 50-59 years, male 143.0
GTEX-SNOS-0926-SM-4DM7A 40-49 years, male 142.3
GTEX-XXEK-1726-SM-4BRVB 50-59 years, male 137.2
GTEX-131XF-1426-SM-5BC68 60-69 years, male 136.3
GTEX-Y3I4-0826-SM-4TT2A 50-59 years, male 135.1
GTEX-145MO-2126-SM-5Q5CZ 60-69 years, male 134.6
GTEX-RM2N-0326-SM-48FD8 50-59 years, male 134.1
GTEX-11DXX-0926-SM-5H112 60-69 years, female 134.0
GTEX-ZLFU-0726-SM-57WF6 40-49 years, male 134.0
GTEX-11P7K-0526-SM-5BC5I 30-39 years, male 133.9
GTEX-146FQ-1526-SM-5Q5CX 30-39 years, male 133.5
GTEX-146FR-0126-SM-5Q5F3 60-69 years, female 133.2
GTEX-U4B1-0726-SM-4DXUA 40-49 years, male 133.2
GTEX-11EQ9-1026-SM-5H134 30-39 years, male 132.2
GTEX-111CU-0526-SM-5EGHK 50-59 years, male 132.1
GTEX-YB5E-0526-SM-4VDSD 40-49 years, male 132.1
GTEX-ZTPG-1026-SM-5DUWP 20-29 years, female 132.1
GTEX-ZVT2-2026-SM-5NQ8Q 50-59 years, female 131.8
GTEX-XGQ4-0226-SM-4GIDS 50-59 years, male 131.3
GTEX-YB5K-1826-SM-5IFJC 40-49 years, female 131.2
GTEX-QLQW-0326-SM-447A8 30-39 years, male 129.5
GTEX-131XG-1426-SM-5GCMO 50-59 years, female 128.8
GTEX-13D11-2226-SM-5IFEO 50-59 years, female 127.5
GTEX-ZYFG-0826-SM-5BC5T 60-69 years, female 127.1
GTEX-1339X-1026-SM-5IFH5 40-49 years, male 126.2
GTEX-11XUK-0626-SM-5N9ES 40-49 years, female 126.0
GTEX-YEC4-1326-SM-5IFHG 40-49 years, male 125.6
GTEX-V955-0326-SM-4JBGV 60-69 years, male 125.1
GTEX-13O61-2126-SM-5IJEO 60-69 years, male 123.7
GTEX-WH7G-0826-SM-4LVMR 40-49 years, male 123.5
GTEX-YFCO-1026-SM-5LU9S 40-49 years, male 123.1
GTEX-ZYW4-2126-SM-59HJ9 60-69 years, male 123.1
GTEX-ZYWO-1326-SM-5SI8X 40-49 years, female 122.8
GTEX-ZT9W-0926-SM-57WFS 50-59 years, male 122.7
GTEX-145ME-0326-SM-5S2QO 40-49 years, female 122.6
GTEX-13FTW-0526-SM-5IFIP 40-49 years, male 122.5
GTEX-12BJ1-1126-SM-5EGGG 60-69 years, male 121.3
GTEX-S3XE-0526-SM-4AD4G 50-59 years, male 121.0
GTEX-11VI4-0426-SM-5EGHZ 40-49 years, female 120.0
GTEX-YEC3-0626-SM-5IFHZ 50-59 years, male 118.5
GTEX-SUCS-1426-SM-4DM5W 70-79 years, male 118.3
GTEX-Q2AI-0426-SM-48U13 40-49 years, male 118.1
GTEX-QMRM-0326-SM-4R1K5 50-59 years, male 117.0
GTEX-R55G-0326-SM-48FDM 40-49 years, female 116.0
GTEX-UJMC-1126-SM-3GADP 50-59 years, male 115.9
GTEX-UPIC-0726-SM-3GADW 20-29 years, female 115.6
GTEX-ZVP2-0726-SM-59HKY 50-59 years, male 115.3
GTEX-1399U-0926-SM-5IFHA 50-59 years, female 112.7
GTEX-S95S-0726-SM-4B64H 60-69 years, male 112.5
GTEX-T8EM-0826-SM-4DM76 40-49 years, male 111.4
GTEX-SE5C-0326-SM-4BRWX 40-49 years, female 111.3
GTEX-ZPIC-0926-SM-4WWFK 40-49 years, female 111.3
GTEX-R55D-1426-SM-48FEN 50-59 years, male 108.9
GTEX-13U4I-1526-SM-5IFFF 40-49 years, female 108.4
GTEX-QV44-0426-SM-4R1KF 50-59 years, male 107.2
GTEX-131XE-1926-SM-5IFER 50-59 years, male 107.1
GTEX-11I78-0626-SM-5A5LZ 50-59 years, female 106.9
GTEX-PLZ6-0726-SM-3P619 30-39 years, male 106.7
GTEX-132AR-1826-SM-5EGHR 50-59 years, female 106.4
GTEX-ZC5H-0826-SM-5N9FH 40-49 years, female 106.4
GTEX-ZZPU-0726-SM-5N9C8 50-59 years, female 106.3
GTEX-1399S-0326-SM-5IFFS 30-39 years, female 106.0
GTEX-UJHI-0626-SM-3DB8T 50-59 years, female 105.7
GTEX-1122O-0726-SM-5GIEV 60-69 years, female 105.4
GTEX-X15G-0726-SM-4PQZ5 50-59 years, female 105.4
GTEX-ZAB5-0826-SM-5P9FU 50-59 years, male 104.2
GTEX-NFK9-1626-SM-3LK5J 40-49 years, male 103.3
GTEX-13YAN-2126-SM-5Q5C4 60-69 years, male 103.1
GTEX-TML8-0526-SM-32QOQ 40-49 years, female 102.7
GTEX-XBEW-1626-SM-4SOJP 40-49 years, male 101.7
GTEX-NPJ8-2126-SM-3MJGK 40-49 years, male 101.5
GTEX-WI4N-1826-SM-4OOSF 40-49 years, female 101.4
GTEX-RWS6-1126-SM-47JXC 60-69 years, female 100.9
GTEX-13OVI-0526-SM-5IFFQ 60-69 years, female 99.1
GTEX-111YS-1226-SM-5EGGJ 60-69 years, male 97.5
GTEX-V1D1-0726-SM-4JBH7 50-59 years, male 96.8
GTEX-ZYY3-0826-SM-5E44R 60-69 years, female 95.9
GTEX-P4PP-1026-SM-3NM9O 30-39 years, female 95.4
GTEX-XUW1-1726-SM-4BOOZ 50-59 years, female 95.1
GTEX-ZAB4-1726-SM-5HL8C 40-49 years, male 94.9
GTEX-WHWD-0726-SM-4OORX 50-59 years, male 94.2
GTEX-13O1R-1826-SM-5KM3B 60-69 years, male 93.9
GTEX-TMMY-1326-SM-4DXU9 40-49 years, female 93.5
GTEX-WQUQ-2126-SM-4OOSO 60-69 years, male 93.2
GTEX-W5WG-0826-SM-4RGNE 50-59 years, female 90.5
GTEX-13W3W-1026-SM-5IFG4 60-69 years, female 90.3
GTEX-WYVS-0926-SM-4SOJV 40-49 years, female 86.9
GTEX-QEL4-1326-SM-447AD 50-59 years, male 86.2
GTEX-XMK1-0326-SM-4B652 40-49 years, male 86.2
GTEX-Q734-0426-SM-48TZX 40-49 years, female 85.2
GTEX-YF7O-1326-SM-4W1ZR 50-59 years, male 85.1
GTEX-S33H-1226-SM-4AD69 30-39 years, male 84.6
GTEX-1399R-0426-SM-5IJE3 30-39 years, male 82.8
GTEX-XQ8I-1926-SM-4BOOK 50-59 years, male 81.9
GTEX-PX3G-1026-SM-48TZW 20-29 years, female 81.1
GTEX-Y3IK-0426-SM-4WWE2 50-59 years, female 79.6
GTEX-X3Y1-0726-SM-3P5YU 40-49 years, male 79.0
GTEX-Y8E4-1326-SM-5IFIY 40-49 years, male 75.6
GTEX-14AS3-0326-SM-5Q5DB 40-49 years, female 73.2
GTEX-QV31-0226-SM-447BO 30-39 years, male 72.5
GTEX-WRHK-0226-SM-4MVOH 20-29 years, female 72.3
GTEX-OOBJ-1026-SM-3NB2L 60-69 years, male 70.4
GTEX-13FLV-0626-SM-5IFEY 50-59 years, male 69.0
GTEX-TKQ2-0426-SM-4DXUO 50-59 years, male 67.7
GTEX-ZPU1-0226-SM-4WWC9 40-49 years, male 65.7
GTEX-Y5V5-1026-SM-5LUAH 60-69 years, female 59.3
GTEX-11NSD-0526-SM-5A5LT 20-29 years, male 58.5
GTEX-12WSG-1026-SM-5EGII 50-59 years, female 55.4
GTEX-11ONC-0526-SM-5BC57 60-69 years, male 54.9
Show all

PANCREAS - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

476.9

FANTOM5 sample id

Sample description

Tags Per Million

Pancreas
Tags Per Million: 476.9
FF:10049-101G4 52 years, male 476.9

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