We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ADAM9
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS STOMACH

GENE/PROTEIN

Dictionary

Stomach, lower
Stomach, upper

Tissue proteome

Stomach

STOMACH - Expression summary

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:64.4TPM
GTEx:22.5RPKM

STOMACH - Annotated protein expression

Pending normal tissue analysis


STOMACH - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

64.4

overview Female, age 33 Sample 1
TPM: 41.7
Cell types%
Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35
N/A Male, age 82 Sample 2
TPM: 66.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30
overview Male, age 71 Sample 3
TPM: 92.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45
overview Female, age 66 Sample 4
TPM: 57.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

22.5

GTEx sample id

Sample description

RPKM

Stomach
RPKM: 22.5
Samples: 193

Max RPKM: 76.6
Min RPKM: 7.4
Std RPKM: 10.3
Median RPKM: 19.5
GTEX-U4B1-1026-SM-4DXT1 40-49 years, male 76.6
GTEX-Y5LM-1326-SM-5RQIS 40-49 years, female 55.9
GTEX-11I78-1726-SM-5A5M3 50-59 years, female 53.6
GTEX-TMMY-1626-SM-4DXTY 40-49 years, female 51.9
GTEX-11NUK-2426-SM-5BC4U 50-59 years, male 51.6
GTEX-133LE-1326-SM-5IFGO 20-29 years, female 49.1
GTEX-117YW-2226-SM-5N9DB 50-59 years, male 47.5
GTEX-11TT1-0726-SM-5GU5A 20-29 years, male 47.4
GTEX-XUJ4-1226-SM-4BOPD 60-69 years, female 43.9
GTEX-T8EM-1226-SM-4DM5J 40-49 years, male 43.8
GTEX-12BJ1-1726-SM-5HL9B 60-69 years, male 42.4
GTEX-ZYY3-1726-SM-5EGH3 60-69 years, female 41.9
GTEX-Q2AH-1126-SM-48TZM 40-49 years, male 41.4
GTEX-Y3IK-1426-SM-4YCES 50-59 years, female 41.4
GTEX-SNMC-0626-SM-4DM6H 20-29 years, male 41.2
GTEX-PWN1-1526-SM-48TDA 40-49 years, female 39.9
GTEX-131XG-1226-SM-5EGH9 50-59 years, female 38.7
GTEX-13PVQ-2126-SM-5L3FW 50-59 years, male 38.2
GTEX-WFG7-1326-SM-4LMK1 20-29 years, male 38.0
GTEX-13FTX-0726-SM-5N9BI 20-29 years, female 37.1
GTEX-WHPG-0426-SM-4M1XW 50-59 years, male 36.6
GTEX-OHPK-1526-SM-3MJGM 50-59 years, female 36.4
GTEX-QDVJ-1426-SM-48U1Y 50-59 years, male 35.6
GTEX-131XF-1226-SM-5HL8V 60-69 years, male 34.4
GTEX-QCQG-0526-SM-48U2A 50-59 years, female 34.1
GTEX-P4PP-1526-SM-3P61M 30-39 years, female 33.0
GTEX-13S7M-1826-SM-5RQK6 60-69 years, female 32.2
GTEX-132AR-2426-SM-5IFFD 50-59 years, female 31.8
GTEX-12WSK-1426-SM-5CVNN 40-49 years, female 31.6
GTEX-QDVN-1226-SM-48TZ5 50-59 years, male 31.2
GTEX-RTLS-2626-SM-46MUJ 60-69 years, female 30.9
GTEX-1399S-1626-SM-5P9GI 30-39 years, female 30.2
GTEX-XBEW-1826-SM-4RTWX 40-49 years, male 30.2
GTEX-13113-0726-SM-5LZUF 60-69 years, female 29.4
GTEX-11DXX-1326-SM-5GIDZ 60-69 years, female 29.3
GTEX-111CU-0926-SM-5EGIK 50-59 years, male 28.4
GTEX-U8T8-1226-SM-4E3IH 60-69 years, male 28.1
GTEX-XV7Q-1326-SM-4BRWM 40-49 years, female 28.1
GTEX-117YX-1026-SM-5H11V 50-59 years, male 27.8
GTEX-111YS-1126-SM-5GZYQ 60-69 years, male 27.6
GTEX-132QS-1826-SM-5IFFN 60-69 years, male 27.1
GTEX-13O21-0926-SM-5IFGT 50-59 years, male 27.0
GTEX-PWOO-1226-SM-48TCO 40-49 years, female 27.0
GTEX-13FTW-1726-SM-5KM2B 40-49 years, male 26.9
GTEX-YFCO-0826-SM-5LUAG 40-49 years, male 26.9
GTEX-12WSD-2326-SM-59HKQ 60-69 years, female 26.4
GTEX-ZQUD-0826-SM-57WDQ 30-39 years, male 26.4
GTEX-SNOS-0826-SM-4DM5N 40-49 years, male 26.1
GTEX-QMRM-1126-SM-447BN 50-59 years, male 26.0
GTEX-YEC4-1426-SM-5IFHS 40-49 years, male 26.0
GTEX-POMQ-0826-SM-3P61H 20-29 years, female 25.9
GTEX-11EM3-1026-SM-5A5KL 20-29 years, female 25.7
GTEX-ZP4G-1226-SM-4WWCJ 20-29 years, female 25.6
GTEX-144GM-1726-SM-5O9AS 20-29 years, male 25.4
GTEX-ZYFG-1326-SM-5GICJ 60-69 years, female 25.1
GTEX-PWCY-0926-SM-48TD7 20-29 years, female 24.9
GTEX-S3XE-1026-SM-4AD4O 50-59 years, male 24.9
GTEX-WEY5-1226-SM-4LMIQ 40-49 years, female 24.8
GTEX-13RTK-0226-SM-5RQHR 20-29 years, male 24.7
GTEX-VJYA-1026-SM-4KL21 60-69 years, male 24.7
GTEX-S4Q7-0726-SM-4AD5F 20-29 years, male 24.5
GTEX-ZVZP-1726-SM-5GZWY 50-59 years, male 24.4
GTEX-145ME-1026-SM-5O9B4 40-49 years, female 24.2
GTEX-RM2N-0826-SM-48FD3 50-59 years, male 24.2
GTEX-WRHK-0626-SM-4MVOE 20-29 years, female 23.9
GTEX-S4UY-1626-SM-4AD55 40-49 years, female 23.5
GTEX-ZY6K-0726-SM-5A5L8 50-59 years, male 23.5
GTEX-13OW6-2526-SM-5IJEC 50-59 years, male 23.3
GTEX-ZVT3-2126-SM-59HL2 60-69 years, female 23.3
GTEX-146FH-2126-SM-5SI9U 50-59 years, female 23.0
GTEX-14BMU-1126-SM-5RQJ8 20-29 years, female 23.0
GTEX-Q2AI-0826-SM-48TZO 40-49 years, male 22.9
GTEX-ZZ64-0426-SM-5E43F 20-29 years, male 22.8
GTEX-ZVP2-1626-SM-5GU5D 50-59 years, male 22.7
GTEX-145MN-1326-SM-5NQ9S 30-39 years, male 22.3
GTEX-ZLFU-1326-SM-4WWET 40-49 years, male 22.2
GTEX-ZLV1-0826-SM-4WWEQ 60-69 years, female 22.2
GTEX-YJ8A-1526-SM-5P9FT 20-29 years, male 22.0
GTEX-1399R-1126-SM-5IFIO 30-39 years, male 21.8
GTEX-S4P3-0726-SM-4AD57 50-59 years, female 21.6
GTEX-OOBJ-1526-SM-3NB1Q 60-69 years, male 21.5
GTEX-ZTX8-0426-SM-59HLG 20-29 years, male 21.4
GTEX-XAJ8-0326-SM-47JYI 40-49 years, male 21.3
GTEX-QXCU-1926-SM-48FE4 50-59 years, male 21.1
GTEX-ZA64-0826-SM-5HL9U 20-29 years, male 21.1
GTEX-SIU7-1426-SM-4BRWT 50-59 years, male 21.0
GTEX-ZDYS-1926-SM-5HL59 50-59 years, male 20.8
GTEX-13N1W-2026-SM-5K7YU 70-79 years, male 20.7
GTEX-R53T-1226-SM-48FCT 50-59 years, female 20.7
GTEX-11WQK-2626-SM-5EQ4K 50-59 years, male 20.6
GTEX-WH7G-1526-SM-4LVMX 40-49 years, male 20.4
GTEX-R55G-1126-SM-48FDG 40-49 years, female 20.2
GTEX-13D11-2126-SM-5IFH2 50-59 years, female 20.0
GTEX-S341-0626-SM-4AD5T 40-49 years, female 20.0
GTEX-ZYVF-2726-SM-5GID4 50-59 years, female 19.8
GTEX-11EQ9-1226-SM-5987E 30-39 years, male 19.6
GTEX-12WSJ-0926-SM-5P9JD 40-49 years, female 19.5
GTEX-T5JW-0926-SM-4DM5K 20-29 years, female 19.5
GTEX-WFG8-1326-SM-4LVN3 20-29 years, male 19.5
GTEX-11GSP-2126-SM-5HL5E 60-69 years, female 19.4
GTEX-144GN-1226-SM-5O991 50-59 years, male 19.4
GTEX-Y9LG-1026-SM-5IFJN 30-39 years, male 19.4
GTEX-S7SF-0626-SM-4AD4V 20-29 years, female 19.3
GTEX-V1D1-1726-SM-4JBHB 50-59 years, male 19.3
GTEX-ZPU1-1626-SM-4WWB2 40-49 years, male 19.2
GTEX-P78B-1826-SM-3P5YX 40-49 years, female 19.0
GTEX-13X6H-1626-SM-5Q5CT 50-59 years, female 18.9
GTEX-QV31-0626-SM-447C5 30-39 years, male 18.9
GTEX-WFJO-1126-SM-4LVLZ 30-39 years, male 18.8
GTEX-O5YW-1526-SM-3MJGL 50-59 years, male 18.7
GTEX-Y3I4-1626-SM-4TT7W 50-59 years, male 18.7
GTEX-RU1J-0526-SM-46MUT 20-29 years, female 18.6
GTEX-XQ8I-2026-SM-4BOOL 50-59 years, male 18.6
GTEX-11P7K-1726-SM-5GU6F 30-39 years, male 18.4
GTEX-WFON-1126-SM-4LVMA 40-49 years, male 18.4
GTEX-Y114-1226-SM-4TT88 50-59 years, female 18.4
GTEX-V955-1326-SM-4JBHR 60-69 years, male 18.2
GTEX-XUZC-0726-SM-4BOPH 30-39 years, female 18.2
GTEX-139D8-2326-SM-5IFGE 30-39 years, female 18.1
GTEX-ZXES-1426-SM-5NQ8S 30-39 years, female 18.1
GTEX-ZZPU-1426-SM-5GZZ6 50-59 years, female 18.1
GTEX-P4QT-1526-SM-3NMCT 50-59 years, female 18.0
GTEX-1122O-1926-SM-5EGIQ 60-69 years, female 17.9
GTEX-13QBU-1126-SM-5LU44 40-49 years, female 17.7
GTEX-QLQ7-0826-SM-447B3 60-69 years, male 17.6
GTEX-S95S-0826-SM-4B64N 60-69 years, male 17.6
GTEX-T6MO-0726-SM-4DM58 40-49 years, female 17.6
GTEX-ZV6S-0926-SM-57WGB 40-49 years, female 17.6
GTEX-13CF3-1926-SM-5K7WF 60-69 years, female 17.5
GTEX-U3ZN-2026-SM-4DXUC 30-39 years, female 17.2
GTEX-11VI4-0326-SM-5EQ6L 40-49 years, female 17.0
GTEX-TKQ2-0926-SM-4DXU5 50-59 years, male 17.0
GTEX-UJHI-1026-SM-4IHJP 50-59 years, female 16.9
GTEX-ZF2S-1426-SM-57WET 50-59 years, female 16.9
GTEX-13FH7-1026-SM-5IJGF 50-59 years, female 16.6
GTEX-R55C-1026-SM-48FCM 40-49 years, male 16.6
GTEX-OIZH-1526-SM-3NB1J 50-59 years, male 16.5
GTEX-139YR-1926-SM-5LZXM 50-59 years, male 16.4
GTEX-XBED-1226-SM-4AT5V 60-69 years, male 16.2
GTEX-1339X-1426-SM-5K7YO 40-49 years, male 15.8
GTEX-NFK9-1526-SM-3LK7B 40-49 years, male 15.8
GTEX-13O3Q-2126-SM-5KM4C 50-59 years, male 15.7
GTEX-PLZ6-0826-SM-3P61K 30-39 years, male 15.6
GTEX-PX3G-1526-SM-48U11 20-29 years, female 15.5
GTEX-UJMC-1226-SM-4IHLI 50-59 years, male 15.1
GTEX-UPIC-1826-SM-4IHKC 20-29 years, female 15.1
GTEX-Y8LW-0826-SM-4WWDO 50-59 years, female 15.0
GTEX-YEC3-1426-101806-SM-5PNXX 50-59 years, male 15.0
GTEX-145LT-1426-SM-5O9B3 40-49 years, male 14.9
GTEX-ZVT2-1626-SM-51MRC 50-59 years, female 14.8
GTEX-Y8E4-1526-SM-4WWDI 40-49 years, male 14.7
GTEX-146FR-2026-SM-5NQAI 60-69 years, female 14.5
GTEX-QLQW-0726-SM-447AA 30-39 years, male 14.5
GTEX-P4PQ-1526-SM-3NMCK 60-69 years, male 14.4
GTEX-145MO-2226-SM-5Q5BN 60-69 years, male 14.3
GTEX-13111-1226-SM-5GCNC 50-59 years, male 13.9
GTEX-Q734-1026-SM-48U16 40-49 years, female 13.8
GTEX-QV44-1226-SM-4R1KE 50-59 years, male 13.8
GTEX-11NSD-1426-SM-5HL67 20-29 years, male 13.7
GTEX-1211K-1426-SM-5FQTF 60-69 years, female 13.7
GTEX-RWS6-0926-SM-47JXE 60-69 years, female 13.7
GTEX-T5JC-1926-SM-4DM6Q 20-29 years, male 13.6
GTEX-XPVG-1526-SM-4B66C 50-59 years, male 13.6
GTEX-ZPIC-2026-SM-57WG3 40-49 years, female 13.6
GTEX-TKQ1-0526-SM-4DXTG 30-39 years, male 13.5
GTEX-OXRK-1626-SM-3NB17 50-59 years, female 13.3
GTEX-WHWD-1426-SM-4OORU 50-59 years, male 13.2
GTEX-S4Z8-1226-SM-4AD6W 60-69 years, male 13.1
GTEX-UPK5-2126-SM-4JBJK 40-49 years, male 13.1
GTEX-131XE-2226-SM-5PNYX 50-59 years, male 13.0
GTEX-13O61-1126-SM-5L3FI 60-69 years, male 13.0
GTEX-11P82-0726-SM-5PNYL 20-29 years, male 12.9
GTEX-13U4I-2526-SM-5SI8Z 40-49 years, female 12.7
GTEX-ZV7C-1626-SM-5NQ7E 50-59 years, male 12.6
GTEX-ZE7O-3026-SM-51MS4 50-59 years, female 12.4
GTEX-13OVI-2426-SM-5KM4J 60-69 years, female 12.1
GTEX-14BMV-2226-SM-5RQHX 50-59 years, male 12.1
GTEX-1399U-1626-SM-5P9J3 50-59 years, female 11.8
GTEX-R55D-1526-SM-48FEJ 50-59 years, male 11.8
GTEX-PW2O-1226-SM-48TCH 20-29 years, male 11.7
GTEX-12696-1726-SM-5EQLH 60-69 years, male 11.6
GTEX-XXEK-0826-SM-4BRWG 50-59 years, male 11.4
GTEX-12C56-0526-SM-5FQST 20-29 years, male 10.8
GTEX-13QJ3-2726-SM-5SI6L 50-59 years, male 10.6
GTEX-SUCS-0926-SM-4DM4Z 70-79 years, male 10.6
GTEX-12WSG-2026-SM-5FQUU 50-59 years, female 10.5
GTEX-X15G-1126-SM-4PQZG 50-59 years, female 10.0
GTEX-Y5V6-1326-SM-4VDTF 60-69 years, male 9.8
GTEX-WZTO-2126-SM-4PQYW 40-49 years, male 9.7
GTEX-ZAB4-1526-SM-5CVN7 40-49 years, male 9.6
GTEX-ZT9W-1526-SM-4YCDE 50-59 years, male 9.6
GTEX-W5WG-1726-SM-4LMI5 50-59 years, female 9.3
GTEX-11EI6-2426-SM-5PNVS 60-69 years, male 7.4
Show all

STOMACH - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

No Fantom CAGE analysis found for this gene / tissue

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.