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TISSUE ATLAS PRIMARY DATA PANCREAS

GENE/PROTEIN

Antibody validation


Dictionary

Pancreas

Tissue proteome

Pancreas

PANCREAS - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:18.2TPM
GTEx:34.4RPKM
FANTOM5:116.6Tags Per Million

PANCREAS - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Exocrine glandular cells:Not detected
Islets of Langerhans:Not detected
 
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA002265

 

Antibody CAB017621

 

Exocrine glandular cells

Not detected   Not detected  

Islets of Langerhans

Not detected  
      
   
   
   

PANCREAS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

18.2

overview Female, age 59 Sample 1
TPM: 13.8
Cell types%
Exocrine glandular cells: 75
Islets of Langerhans: 10
Ductal cells: 5
Other cell types: 10
overview Male, age 60 Sample 2
TPM: 22.5
Cell types%
Exocrine glandular cells: 90
Islets of Langerhans: 5
Ductal cells: 5

PANCREAS - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

34.4

GTEx sample id

Sample description

RPKM

Pancreas
RPKM: 34.4
Samples: 171

Max RPKM: 108.8
Min RPKM: 8.2
Std RPKM: 15.9
Median RPKM: 30.7
GTEX-ZF3C-2026-SM-4WWB5 50-59 years, female 108.8
GTEX-WFON-0626-SM-4LVLX 40-49 years, male 79.9
GTEX-QDVN-0926-SM-2I5GL 50-59 years, male 78.7
GTEX-Q2AH-0926-SM-48TZK 40-49 years, male 75.8
GTEX-13PL7-2226-SM-5L3IC 60-69 years, female 73.5
GTEX-QCQG-0426-SM-48U29 50-59 years, female 72.6
GTEX-ZTPG-1026-SM-5DUWP 20-29 years, female 68.3
GTEX-139YR-1526-SM-5IFJ1 50-59 years, male 66.0
GTEX-R55G-0326-SM-48FDM 40-49 years, female 65.8
GTEX-Y9LG-0726-SM-4VDS3 30-39 years, male 65.3
GTEX-X4LF-0326-SM-4QAS9 50-59 years, male 65.1
GTEX-XYKS-1226-SM-4BRVI 60-69 years, female 64.5
GTEX-P4QS-1026-SM-3NMCW 60-69 years, male 64.2
GTEX-Y3IK-0426-SM-4WWE2 50-59 years, female 61.4
GTEX-X15G-0726-SM-4PQZ5 50-59 years, female 58.0
GTEX-1399U-0926-SM-5IFHA 50-59 years, female 56.6
GTEX-OHPL-1026-SM-3MJGI 60-69 years, female 55.6
GTEX-VJYA-0826-SM-4KL1M 60-69 years, male 51.5
GTEX-XV7Q-0926-SM-4BRVQ 40-49 years, female 51.5
GTEX-ZZPU-0726-SM-5N9C8 50-59 years, female 51.3
GTEX-ZYW4-2126-SM-59HJ9 60-69 years, male 50.9
GTEX-14E6E-1426-SM-5RQI2 30-39 years, male 50.8
GTEX-X5EB-0526-SM-46MVP 40-49 years, male 50.8
GTEX-WHWD-0726-SM-4OORX 50-59 years, male 50.1
GTEX-13D11-2226-SM-5IFEO 50-59 years, female 49.4
GTEX-13X6H-0626-SM-5LU53 50-59 years, female 49.4
GTEX-ZVT2-2026-SM-5NQ8Q 50-59 years, female 49.3
GTEX-OOBK-1026-SM-48TC2 40-49 years, male 49.2
GTEX-XMK1-0326-SM-4B652 40-49 years, male 48.4
GTEX-XPVG-0326-SM-4B653 50-59 years, male 48.4
GTEX-144GN-0826-SM-5LU5G 50-59 years, male 48.2
GTEX-QLQW-0326-SM-447A8 30-39 years, male 46.6
GTEX-ZAB5-0826-SM-5P9FU 50-59 years, male 46.4
GTEX-132QS-0926-SM-5P9GB 60-69 years, male 46.2
GTEX-WFG8-0326-SM-4LVN4 20-29 years, male 46.2
GTEX-QDVJ-1226-SM-48U1V 50-59 years, male 46.1
GTEX-14ICL-1126-SM-5S2RE 30-39 years, male 45.8
GTEX-XBED-0226-SM-47JY8 60-69 years, male 45.1
GTEX-U4B1-0726-SM-4DXUA 40-49 years, male 45.0
GTEX-132AR-1826-SM-5EGHR 50-59 years, female 43.8
GTEX-ZC5H-0826-SM-5N9FH 40-49 years, female 43.5
GTEX-117YX-0226-SM-5EGH6 50-59 years, male 42.7
GTEX-V1D1-0726-SM-4JBH7 50-59 years, male 42.7
GTEX-13U4I-1526-SM-5IFFF 40-49 years, female 42.5
GTEX-WFJO-0626-SM-4LVMC 30-39 years, male 42.5
GTEX-ZG7Y-0326-SM-4WWEY 50-59 years, male 42.0
GTEX-12WSK-0226-SM-5BC62 40-49 years, female 41.5
GTEX-Y114-0826-SM-4TT77 50-59 years, female 41.4
GTEX-YB5E-0526-SM-4VDSD 40-49 years, male 41.0
GTEX-S32W-0826-SM-4AD5Z 50-59 years, female 40.8
GTEX-145MN-1426-SM-5SI9H 30-39 years, male 40.5
GTEX-Y5LM-0526-SM-4V6G3 40-49 years, female 40.5
GTEX-O5YT-1026-SM-3MJGF 20-29 years, male 40.1
GTEX-1399R-0426-SM-5IJE3 30-39 years, male 39.7
GTEX-1211K-1126-SM-5EGGB 60-69 years, female 39.5
GTEX-T5JW-0226-SM-4DM7I 20-29 years, female 39.4
GTEX-12WSN-0826-SM-5GCOF 40-49 years, male 39.3
GTEX-ZVP2-0726-SM-59HKY 50-59 years, male 39.2
GTEX-1497J-0426-SM-5Q5CO 60-69 years, male 39.0
GTEX-V955-0326-SM-4JBGV 60-69 years, male 38.4
GTEX-PX3G-1026-SM-48TZW 20-29 years, female 38.3
GTEX-131XE-1926-SM-5IFER 50-59 years, male 37.0
GTEX-ZPU1-0226-SM-4WWC9 40-49 years, male 36.7
GTEX-R53T-0426-SM-48FEM 50-59 years, female 36.4
GTEX-11P7K-0526-SM-5BC5I 30-39 years, male 35.9
GTEX-131XF-1426-SM-5BC68 60-69 years, male 35.8
GTEX-13FH7-1426-SM-5IFIC 50-59 years, female 35.8
GTEX-PW2O-0826-SM-48TC5 20-29 years, male 35.8
GTEX-SUCS-1426-SM-4DM5W 70-79 years, male 35.5
GTEX-PWOO-0626-SM-48TZH 40-49 years, female 35.2
GTEX-QMRM-0326-SM-4R1K5 50-59 years, male 34.4
GTEX-WFG7-0426-SM-4LMK5 20-29 years, male 34.4
GTEX-OHPM-1026-SM-3LK74 50-59 years, male 34.2
GTEX-ZPIC-0926-SM-4WWFK 40-49 years, female 34.2
GTEX-WI4N-1826-SM-4OOSF 40-49 years, female 34.1
GTEX-13CF3-1026-SM-5LZWY 60-69 years, female 34.0
GTEX-UPIC-0726-SM-3GADW 20-29 years, female 34.0
GTEX-Y3I4-0826-SM-4TT2A 50-59 years, male 33.6
GTEX-13VXT-1226-SM-5LU3M 20-29 years, female 32.8
GTEX-13N11-0226-SM-5KM3C 50-59 years, female 32.4
GTEX-S33H-1226-SM-4AD69 30-39 years, male 32.2
GTEX-ZYFG-0826-SM-5BC5T 60-69 years, female 32.1
GTEX-11DXX-0926-SM-5H112 60-69 years, female 31.8
GTEX-S4P3-0626-SM-4AD59 50-59 years, female 31.4
GTEX-Q2AI-0426-SM-48U13 40-49 years, male 31.3
GTEX-1399S-0326-SM-5IFFS 30-39 years, female 30.7
GTEX-13YAN-2126-SM-5Q5C4 60-69 years, male 30.7
GTEX-145MO-2126-SM-5Q5CZ 60-69 years, male 30.5
GTEX-SNOS-0926-SM-4DM7A 40-49 years, male 30.5
GTEX-YFCO-1026-SM-5LU9S 40-49 years, male 30.5
GTEX-1122O-0726-SM-5GIEV 60-69 years, female 30.0
GTEX-ZLFU-0726-SM-57WF6 40-49 years, male 29.5
GTEX-UJHI-0626-SM-3DB8T 50-59 years, female 29.4
GTEX-1339X-1026-SM-5IFH5 40-49 years, male 29.3
GTEX-ZLWG-0326-SM-4WWC7 50-59 years, female 29.1
GTEX-146FQ-1526-SM-5Q5CX 30-39 years, male 28.7
GTEX-QEL4-1326-SM-447AD 50-59 years, male 28.4
GTEX-RM2N-0326-SM-48FD8 50-59 years, male 28.2
GTEX-13OVI-0526-SM-5IFFQ 60-69 years, female 28.1
GTEX-NPJ8-2126-SM-3MJGK 40-49 years, male 27.6
GTEX-QLQ7-0626-SM-4R1JT 60-69 years, male 27.4
GTEX-TMMY-1326-SM-4DXU9 40-49 years, female 27.4
GTEX-ZYWO-1326-SM-5SI8X 40-49 years, female 27.4
GTEX-11EQ9-1026-SM-5H134 30-39 years, male 27.1
GTEX-111CU-0526-SM-5EGHK 50-59 years, male 26.7
GTEX-12WSL-0426-SM-5GCNX 50-59 years, male 26.7
GTEX-UJMC-1126-SM-3GADP 50-59 years, male 26.7
GTEX-TML8-0526-SM-32QOQ 40-49 years, female 26.3
GTEX-ZT9W-0926-SM-57WFS 50-59 years, male 25.8
GTEX-ZVZP-0626-SM-59HL5 50-59 years, male 25.8
GTEX-SE5C-0326-SM-4BRWX 40-49 years, female 25.5
GTEX-W5WG-0826-SM-4RGNE 50-59 years, female 25.4
GTEX-131XG-1426-SM-5GCMO 50-59 years, female 25.1
GTEX-SIU7-0926-SM-4BRX1 50-59 years, male 24.9
GTEX-RWS6-1126-SM-47JXC 60-69 years, female 24.8
GTEX-X3Y1-0726-SM-3P5YU 40-49 years, male 24.7
GTEX-11VI4-0426-SM-5EGHZ 40-49 years, female 24.6
GTEX-S95S-0726-SM-4B64H 60-69 years, male 24.6
GTEX-13O61-2126-SM-5IJEO 60-69 years, male 24.4
GTEX-NFK9-1626-SM-3LK5J 40-49 years, male 24.4
GTEX-13W3W-1026-SM-5IFG4 60-69 years, female 24.2
GTEX-Y8LW-1026-SM-5IFJY 50-59 years, female 23.9
GTEX-13FTW-0526-SM-5IFIP 40-49 years, male 23.8
GTEX-PSDG-1526-SM-48TCY 50-59 years, male 23.6
GTEX-14AS3-0326-SM-5Q5DB 40-49 years, female 23.5
GTEX-WYVS-0926-SM-4SOJV 40-49 years, female 23.4
GTEX-YEC3-0626-SM-5IFHZ 50-59 years, male 23.4
GTEX-WH7G-0826-SM-4LVMR 40-49 years, male 23.0
GTEX-XGQ4-0226-SM-4GIDS 50-59 years, male 23.0
GTEX-146FR-0126-SM-5Q5F3 60-69 years, female 22.7
GTEX-QV44-0426-SM-4R1KF 50-59 years, male 22.5
GTEX-P4PQ-1026-SM-3NMCN 60-69 years, male 22.3
GTEX-WQUQ-2126-SM-4OOSO 60-69 years, male 22.3
GTEX-11ONC-0526-SM-5BC57 60-69 years, male 21.9
GTEX-PLZ6-0726-SM-3P619 30-39 years, male 21.4
GTEX-Q734-0426-SM-48TZX 40-49 years, female 20.7
GTEX-111YS-1226-SM-5EGGJ 60-69 years, male 20.4
GTEX-13O1R-1826-SM-5KM3B 60-69 years, male 20.3
GTEX-ZAB4-1726-SM-5HL8C 40-49 years, male 20.2
GTEX-T8EM-0826-SM-4DM76 40-49 years, male 20.1
GTEX-ZYY3-0826-SM-5E44R 60-69 years, female 20.1
GTEX-ZV7C-0726-SM-59HKH 50-59 years, male 19.8
GTEX-13FTX-1226-SM-5IFGN 20-29 years, female 19.7
GTEX-YF7O-1326-SM-4W1ZR 50-59 years, male 19.7
GTEX-1128S-0826-SM-5GZZI 60-69 years, female 19.6
GTEX-TKQ2-0426-SM-4DXUO 50-59 years, male 19.6
GTEX-145ME-0326-SM-5S2QO 40-49 years, female 19.5
GTEX-XQ8I-1926-SM-4BOOK 50-59 years, male 19.3
GTEX-11LCK-0226-SM-5A5M6 30-39 years, male 19.2
GTEX-11TT1-0326-SM-5LUAY 20-29 years, male 19.2
GTEX-ZP4G-0426-SM-4YCER 20-29 years, female 18.9
GTEX-144FL-1526-SM-5Q5CA 50-59 years, male 18.8
GTEX-Y8E4-1326-SM-5IFIY 40-49 years, male 18.6
GTEX-XXEK-1726-SM-4BRVB 50-59 years, male 18.5
GTEX-R55D-1426-SM-48FEN 50-59 years, male 18.4
GTEX-OOBJ-1026-SM-3NB2L 60-69 years, male 17.6
GTEX-11I78-0626-SM-5A5LZ 50-59 years, female 16.8
GTEX-Y5V5-1026-SM-5LUAH 60-69 years, female 16.7
GTEX-XBEW-1626-SM-4SOJP 40-49 years, male 16.5
GTEX-S3XE-0526-SM-4AD4G 50-59 years, male 16.3
GTEX-12BJ1-1126-SM-5EGGG 60-69 years, male 16.1
GTEX-YB5K-1826-SM-5IFJC 40-49 years, female 15.9
GTEX-QV31-0226-SM-447BO 30-39 years, male 15.3
GTEX-YEC4-1326-SM-5IFHG 40-49 years, male 14.5
GTEX-XUW1-1726-SM-4BOOZ 50-59 years, female 14.0
GTEX-13FLV-0626-SM-5IFEY 50-59 years, male 13.7
GTEX-11NSD-0526-SM-5A5LT 20-29 years, male 13.2
GTEX-P4PP-1026-SM-3NM9O 30-39 years, female 13.2
GTEX-WRHK-0226-SM-4MVOH 20-29 years, female 10.8
GTEX-12WSG-1026-SM-5EGII 50-59 years, female 9.4
GTEX-11XUK-0626-SM-5N9ES 40-49 years, female 8.2
Show all

PANCREAS - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

116.6

FANTOM5 sample id

Sample description

Tags Per Million

Pancreas
Tags Per Million: 116.6
FF:10049-101G4 52 years, male 116.6

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