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Validation

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TISSUE ATLAS PRIMARY DATA COLON

GENE/PROTEIN

Antibody validation


Dictionary

Colon

Tissue proteome

Colon

COLON - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

h
m
l
n

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

HPA:87.6TPM
GTEx:34.3RPKM
FANTOM5:107.3Tags Per Million

COLON - Annotated protein expressioni

The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.

Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.

The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.

For histological reference, view the histological dictionary.

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody stainingi

This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.

Read more

Antibody HPA011271

 

Antibody HPA011272

 

Antibody CAB013023

 

Antibody CAB035987

 

Antibody CAB058693

 

Endothelial cells

Not detected   Medium   Medium   Medium   Medium  

Glandular cells

Not detected   Not detected   Low   Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected   Low   Not detected   Low  
         
         
         

COLON - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Average TPM

87.6

overview Male, age 54 Sample 1
TPM: 54.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 56.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 46.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 79.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 127.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 162.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 84.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 58.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 120.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 53.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 94.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 105.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 95.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

34.3

GTEx sample id

Sample description

RPKM

Colon - Sigmoid
RPKM: 42.3
Samples: 149

Max RPKM: 122.0
Min RPKM: 11.1
Std RPKM: 17.6
Median RPKM: 38.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 122.0
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 103.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 91.1
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 84.7
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 78.7
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 75.4
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 75.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 73.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 71.9
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 70.3
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 69.6
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 69.1
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 65.8
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 65.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 64.1
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 64.0
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 63.5
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 62.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 61.8
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 61.5
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 61.5
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 61.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 60.1
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 57.0
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 56.9
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 56.0
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 55.8
GTEX-145LS-2926-SM-5O99G 60-69 years, female 55.6
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 55.6
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 55.3
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 55.1
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 54.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 54.5
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 53.9
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 53.8
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 53.6
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 53.3
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 53.1
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 52.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 52.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 52.5
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 52.4
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 52.3
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 50.9
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 50.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 50.0
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 49.7
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 49.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 49.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 48.1
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 47.6
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 47.2
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 46.4
GTEX-1122O-1426-SM-5H11R 60-69 years, female 46.3
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 46.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 46.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 45.2
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 44.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 43.9
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 43.5
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 43.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 42.8
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 42.3
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 41.9
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 40.6
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 40.6
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 40.4
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 40.0
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 40.0
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 39.7
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 39.5
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 39.2
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 38.8
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 38.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 38.2
GTEX-13111-1926-SM-5GCOL 50-59 years, male 38.1
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 37.8
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 37.8
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 37.4
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 37.3
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 37.3
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 37.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 36.9
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 36.6
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 36.0
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 35.7
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 35.6
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 35.6
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 35.2
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 34.5
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 34.4
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 34.4
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 34.2
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 34.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 33.6
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 32.8
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 32.5
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 31.9
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 31.6
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 30.9
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 30.8
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 30.8
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 30.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 30.1
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 29.5
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 29.4
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 28.8
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 28.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 28.4
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 28.4
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 28.3
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 28.2
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 28.2
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 28.1
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 28.1
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 28.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 27.8
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 27.6
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 27.4
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 27.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 27.2
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 26.8
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 26.6
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 26.5
GTEX-12696-1926-SM-5EGJT 60-69 years, male 26.4
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 26.3
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 26.0
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 25.7
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 25.5
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 25.4
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 25.0
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 24.9
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 24.7
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 24.3
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 24.2
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 24.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 23.6
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 22.9
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 22.7
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 22.2
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 21.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 21.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 20.6
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 19.9
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 19.9
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 19.7
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 18.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 17.4
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 11.1
Show all
Colon - Transverse
RPKM: 28.2
Samples: 196

Max RPKM: 290.3
Min RPKM: 4.6
Std RPKM: 28.8
Median RPKM: 18.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 290.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 143.5
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 131.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 120.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 82.6
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 79.9
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 78.4
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 75.5
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 75.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 71.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 66.2
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 66.2
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 64.1
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 62.6
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 62.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 61.6
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 60.1
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 59.8
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 59.7
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 59.3
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 58.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 58.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 55.6
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 55.3
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 54.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 54.6
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 51.6
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 51.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 50.4
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 50.0
GTEX-117YX-0826-SM-5H11J 50-59 years, male 48.3
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 46.6
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 46.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 46.1
GTEX-S341-1426-SM-4AD6U 40-49 years, female 42.2
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 41.1
GTEX-11NSD-1626-SM-5986U 20-29 years, male 39.9
GTEX-11GSP-1626-SM-5986N 60-69 years, female 39.5
GTEX-Y8E4-2426-SM-4WWDN 40-49 years, male 38.9
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 38.2
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 38.0
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 37.6
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 37.5
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 37.0
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 36.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 36.4
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 36.3
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 36.2
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 35.4
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 34.6
GTEX-1128S-1626-SM-5H12O 60-69 years, female 33.5
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 32.2
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 31.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 30.6
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 30.4
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 29.9
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 29.3
GTEX-ZZ64-0726-SM-5GZX4 20-29 years, male 29.3
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 29.1
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 29.1
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 28.6
GTEX-S3XE-1126-SM-4AD4N 50-59 years, male 27.4
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 27.2
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 26.5
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 26.4
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 26.4
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 26.3
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 26.2
GTEX-Y114-1526-SM-4TT79 50-59 years, female 26.2
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 26.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 25.1
GTEX-ZGAY-2126-SM-4YCFB 40-49 years, female 24.6
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 24.4
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 24.3
GTEX-144GN-1126-SM-5LU33 50-59 years, male 24.2
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 24.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 23.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 23.2
GTEX-Q734-1126-SM-48TZY 40-49 years, female 23.2
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 22.6
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 22.5
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 22.2
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 22.0
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 21.9
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 21.6
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 21.5
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 21.5
GTEX-ZTSS-1126-SM-5985O 40-49 years, male 21.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 21.1
GTEX-XUW1-1926-SM-4BOP1 50-59 years, female 20.9
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 20.8
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 20.6
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 20.3
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 19.5
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 19.1
GTEX-PX3G-1426-SM-48U1J 20-29 years, female 19.1
GTEX-ZPCL-1826-SM-57WF1 60-69 years, female 19.1
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 18.7
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 18.6
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 18.4
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 18.3
GTEX-139YR-2126-SM-5KM11 50-59 years, male 18.2
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 18.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 18.1
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 18.1
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 18.1
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 17.9
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 17.8
GTEX-PLZ6-0926-SM-3P5ZQ 30-39 years, male 17.7
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 17.6
GTEX-YEC3-2426-SM-5IFJR 50-59 years, male 17.2
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 16.8
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 16.7
GTEX-ZP4G-1726-SM-4WWCM 20-29 years, female 16.6
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 16.5
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 16.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 16.4
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 16.3
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 16.1
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 16.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 15.8
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 15.6
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 15.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 15.3
GTEX-SE5C-1526-SM-4BRWU 40-49 years, female 15.3
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 15.1
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 15.0
GTEX-QLQW-0426-SM-447A7 30-39 years, male 14.8
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 14.8
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 14.7
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 14.7
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 14.6
GTEX-13111-0726-SM-5DUVE 50-59 years, male 14.3
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 14.2
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 14.0
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 14.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 13.9
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 13.9
GTEX-QCQG-1626-SM-48U26 50-59 years, female 13.8
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 13.8
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 13.7
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 13.6
GTEX-139T6-1326-SM-5IFFO 50-59 years, male 13.5
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 13.4
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 13.4
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 13.1
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 13.0
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 12.5
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 12.4
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 12.4
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 12.3
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 12.1
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 12.0
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 11.9
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 11.9
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 11.8
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 11.6
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 11.5
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 11.3
GTEX-11DXX-1826-SM-5H126 60-69 years, female 11.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 11.2
GTEX-R55D-1826-SM-48FEF 50-59 years, male 11.2
GTEX-R55C-1126-SM-48FCJ 40-49 years, male 11.1
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 10.9
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 10.9
GTEX-ZPU1-1926-SM-57WDT 40-49 years, male 10.9
GTEX-144GM-1226-SM-5LU52 20-29 years, male 10.6
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 10.5
GTEX-OIZH-1426-SM-3NB1O 50-59 years, male 10.5
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 10.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 10.5
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 10.4
GTEX-R55G-1226-SM-48FDC 40-49 years, female 10.3
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 9.7
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 9.6
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 9.5
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 9.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 9.5
GTEX-S7SF-1926-SM-4AT5B 20-29 years, female 9.4
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 9.3
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 9.1
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 8.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 8.5
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 8.1
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 7.7
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 7.7
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 7.5
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 7.0
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 6.6
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 6.6
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 6.5
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 6.3
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 6.1
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 5.7
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 5.1
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 4.6
Show all

COLON - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

Average Tags Per Million

107.3

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 107.3
FF:10014-101C5 62,83,84 years, mixed 107.3

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