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HOXA11

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.8TPM
GTEx:14.8RPKM
FANTOM5:18.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA035623

  

Endothelial cells

 Low  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

6.8
overview Male, age 54 Sample 1
TPM: 5.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 16.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 17.6
Samples: 149

Max RPKM: 34.1
Min RPKM: 0.0
Std RPKM: 6.3
Median RPKM: 17.6
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 34.1
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 32.4
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 32.0
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 30.7
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 30.6
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 29.8
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 29.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 29.4
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 29.0
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 27.5
Show all
Colon - Transverse
RPKM: 12.7
Samples: 196

Max RPKM: 43.7
Min RPKM: 0.0
Std RPKM: 7.9
Median RPKM: 10.0
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 43.7
GTEX-11GSP-1626-SM-5986N 60-69 years, female 40.0
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 39.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 37.2
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 31.9
GTEX-S341-1426-SM-4AD6U 40-49 years, female 30.6
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 29.9
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 29.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 29.4
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 28.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

18.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 18.6
FF:10014-101C5 62,83,84 years, mixed 18.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.