Fields »
ABOUT
HELP
BLOG
WDR54

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.4TPM
GTEx:4.7RPKM
FANTOM5:7.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA043257

  

Antibody HPA053558

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Medium   Low  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

4.4
overview Male, age 54 Sample 1
TPM: 4.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 11.7
Min RPKM: 1.5
Std RPKM: 1.8
Median RPKM: 4.9
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 11.7
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 11.3
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 11.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 10.5
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 9.8
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 9.6
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 9.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 9.3
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 9.2
GTEX-145LS-2926-SM-5O99G 60-69 years, female 9.0
Show all
Colon - Transverse
RPKM: 4.2
Samples: 196

Max RPKM: 11.3
Min RPKM: 1.3
Std RPKM: 1.5
Median RPKM: 3.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 11.3
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 10.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 8.5
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 8.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 8.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 8.2
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 8.0
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 7.7
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 7.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 7.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

7.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 7.4
FF:10014-101C5 62,83,84 years, mixed 7.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.