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LAMP2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:62.3TPM
GTEx:14.3RPKM
FANTOM5:120.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 
 

Antibody staining

Antibody HPA029100

  

Antibody CAB005272

  

Endothelial cells

 Low   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected  
      
   
   

COLON - HPA RNA-seq

Average TPM

62.3
overview Male, age 54 Sample 1
TPM: 71.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 60.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 43.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 67
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 60.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 49.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 72.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 62.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 57.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 60.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 80.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 66.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 58.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.8
Samples: 149

Max RPKM: 31.8
Min RPKM: 6.6
Std RPKM: 3.5
Median RPKM: 13.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 31.8
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 24.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 23.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 22.9
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 21.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 20.8
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 19.7
GTEX-12696-1926-SM-5EGJT 60-69 years, male 19.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 19.3
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 19.0
Show all
Colon - Transverse
RPKM: 14.7
Samples: 196

Max RPKM: 38.5
Min RPKM: 7.8
Std RPKM: 3.6
Median RPKM: 14.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 38.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 30.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 25.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 23.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 22.3
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 21.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 21.2
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 20.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 20.5
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 20.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

120.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 120.3
FF:10014-101C5 62,83,84 years, mixed 120.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.